BLASTX nr result

ID: Aconitum21_contig00023491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023491
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   157   1e-36
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...   137   9e-31
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   137   1e-30
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]         137   1e-30
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...   134   1e-29

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  157 bits (396), Expect = 1e-36
 Identities = 74/120 (61%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
 Frame = -2

Query: 466 RSDNGSEFINRSFSEYTSNQGIIHQTSCVGTPQQNGVAERKNRHILEVTRALMLQMNVPK 287
           R+DNG+E+ + +   Y  + GI+HQTSCV TPQQNGVAERKNR +LE TRA+M+QMNVPK
Sbjct: 616 RTDNGTEYTSHNMKNYLISHGIVHQTSCVNTPQQNGVAERKNRDLLEKTRAIMMQMNVPK 675

Query: 286 SYWSHGVLTATYLVNCTPSRILDFKSLLEVLKHRKIDISHLRVFGCVC--SLTALSPRDQ 113
            +WS+GVLTATYL+N  PSR+LDF   LEVL+ +K D+SHL+VFGC C   L+A   RD+
Sbjct: 676 HFWSYGVLTATYLINRLPSRVLDFLCPLEVLQQKKPDLSHLKVFGCTCFVHLSATQRRDK 735


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/122 (54%), Positives = 88/122 (72%)
 Frame = -2

Query: 469 FRSDNGSEFINRSFSEYTSNQGIIHQTSCVGTPQQNGVAERKNRHILEVTRALMLQMNVP 290
           FR+DNG E+ ++ F ++ + +GIIHQTSC  TPQQNGVAERKNRH++EV R++M   +VP
Sbjct: 575 FRTDNGGEYTSQKFRDHLAKRGIIHQTSCPYTPQQNGVAERKNRHLMEVARSMMFHTSVP 634

Query: 289 KSYWSHGVLTATYLVNCTPSRILDFKSLLEVLKHRKIDISHLRVFGCVCSLTALSPRDQY 110
           K +W   VLTA YL+N TP+++L   S  EVL + K  I HLRVFGCVC +  L P +Q 
Sbjct: 635 KRFWGDAVLTACYLINRTPTKVLSDLSPFEVLNNTKPFIDHLRVFGCVCFV--LIPGEQR 692

Query: 109 SR 104
           S+
Sbjct: 693 SK 694


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/108 (61%), Positives = 80/108 (74%)
 Frame = -2

Query: 466 RSDNGSEFINRSFSEYTSNQGIIHQTSCVGTPQQNGVAERKNRHILEVTRALMLQMNVPK 287
           R+DNG+E+IN  F  Y S++GIIHQT+C GTP QNGVAERKNRH+LEV R+LM QMNVPK
Sbjct: 364 RTDNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQMNVPK 423

Query: 286 SYWSHGVLTATYLVNCTPSRILDFKSLLEVLKHRKIDISHLRVFGCVC 143
             WS  V+TA YL+N  PSRIL  KS  E+L  ++      +VFGCVC
Sbjct: 424 YLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKREFKVPPKVFGCVC 471


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/108 (61%), Positives = 80/108 (74%)
 Frame = -2

Query: 466 RSDNGSEFINRSFSEYTSNQGIIHQTSCVGTPQQNGVAERKNRHILEVTRALMLQMNVPK 287
           R+DNG+E+IN  F  Y S++GIIHQT+C GTP QNGVAERKNRH+LEV R+LM QMNVPK
Sbjct: 533 RTDNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQMNVPK 592

Query: 286 SYWSHGVLTATYLVNCTPSRILDFKSLLEVLKHRKIDISHLRVFGCVC 143
             WS  V+TA YL+N  PSRIL  KS  E+L  ++      +VFGCVC
Sbjct: 593 YLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKREFKVPPKVFGCVC 640


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1588

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/108 (60%), Positives = 78/108 (72%)
 Frame = -2

Query: 466  RSDNGSEFINRSFSEYTSNQGIIHQTSCVGTPQQNGVAERKNRHILEVTRALMLQMNVPK 287
            R+DNG+E+IN  F  Y S+ GIIHQT+C G P QNGVAERKNRH+LEV R+LM QMNVPK
Sbjct: 684  RTDNGTEYINSEFVSYVSDHGIIHQTTCPGAPPQNGVAERKNRHLLEVARSLMFQMNVPK 743

Query: 286  SYWSHGVLTATYLVNCTPSRILDFKSLLEVLKHRKIDISHLRVFGCVC 143
              WS  V+TA YL+N  PSRIL  KS  E+L  ++      +VFGCVC
Sbjct: 744  YLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKREFKVPPKVFGCVC 791


Top