BLASTX nr result

ID: Aconitum21_contig00023490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023490
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp....    91   1e-16
ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Ar...    90   2e-16
dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]         90   2e-16
ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group] g...    86   2e-15
ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein lig...    85   7e-15

>ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309434|gb|EFH39858.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 516

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
 Frame = -2

Query: 300 QPQGEEIEVNQQPQPMETGQSSTGDQS--MQVDLDLVKPYLECPICLKPRRQSRMAKGCL 127
           + + EE E  +  +  ++  S +GDQS  M++DL  ++  ++CPICL   +++R    CL
Sbjct: 89  EEEEEEEEEEEDEEEEDSKSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECL 148

Query: 126 HRFCKKCIDKAIQFGNHECPVCRTHIPSKRSLVADIRSDNVI 1
           HRFC++CIDK+++ GN+ECP CR H  S+RSL  D + D +I
Sbjct: 149 HRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALI 190


>ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
           gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName:
           Full=Putative E3 ubiquitin-protein ligase RING1a;
           AltName: Full=Polycomb complex protein RING1a; AltName:
           Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
           finger protein 434 gi|332007702|gb|AED95085.1| putative
           E3 ubiquitin-protein ligase RING1a [Arabidopsis
           thaliana]
          Length = 522

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/102 (41%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
 Frame = -2

Query: 300 QPQGEEIEVNQQPQPMETGQSSTGDQS--MQVDLDLVKPYLECPICLKPRRQSRMAKGCL 127
           + + EE E  ++     +  S +GDQS  M++DL  ++  ++CPICL   +++R    CL
Sbjct: 94  EEEEEEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECL 153

Query: 126 HRFCKKCIDKAIQFGNHECPVCRTHIPSKRSLVADIRSDNVI 1
           HRFC++CIDK+++ GN+ECP CR H  S+RSL  D + D +I
Sbjct: 154 HRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALI 195


>dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
          Length = 486

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/102 (41%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
 Frame = -2

Query: 300 QPQGEEIEVNQQPQPMETGQSSTGDQS--MQVDLDLVKPYLECPICLKPRRQSRMAKGCL 127
           + + EE E  ++     +  S +GDQS  M++DL  ++  ++CPICL   +++R    CL
Sbjct: 94  EEEEEEEEEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECL 153

Query: 126 HRFCKKCIDKAIQFGNHECPVCRTHIPSKRSLVADIRSDNVI 1
           HRFC++CIDK+++ GN+ECP CR H  S+RSL  D + D +I
Sbjct: 154 HRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALI 195


>ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
           gi|53792319|dbj|BAD53026.1| putative ring finger protein
           1 [Oryza sativa Japonica Group]
           gi|215767809|dbj|BAH00038.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619392|gb|EEE55524.1| hypothetical protein
           OsJ_03751 [Oryza sativa Japonica Group]
           gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa
           Japonica Group]
          Length = 489

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
 Frame = -2

Query: 348 MPPRRSYSAGSTSK---PPQPQGE---EIEVNQQPQPMETGQSSTGDQS--MQVDLDLVK 193
           +PPR   +A + +K    PQPQ E   + E             S GD    + V L  ++
Sbjct: 49  LPPRGGSAAAAAAKRAADPQPQREGDSDAEFGGGVDGDSESSQSDGDMDEFIIVKLAEIR 108

Query: 192 PYLECPICLKPRRQSRMAKGCLHRFCKKCIDKAIQFGNHECPVCRTHIPSKRSLVADIRS 13
             ++CPICL   R++R    CLHRFC+ CIDK+++ GN+ECP CRTH  S+RSL  D   
Sbjct: 109 KEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNY 168

Query: 12  DNVI 1
           D +I
Sbjct: 169 DALI 172


>ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Cucumis sativus]
          Length = 495

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
 Frame = -2

Query: 294 QGEEIEVNQQPQPMETGQSSTGDQSMQ---------VDLDLVKPYLECPICLKPRRQSRM 142
           +GEE +  QQ +     + S G QS           V+L  ++  ++CPICL   +++R 
Sbjct: 62  EGEEEKQRQQLEEATGDRDSEGTQSSSSEEKPEFIFVELSGIRKDVQCPICLGIIKKTRT 121

Query: 141 AKGCLHRFCKKCIDKAIQFGNHECPVCRTHIPSKRSLVADIRSDNVI 1
              CLHRFC++CIDK+++ GN+ECP CRTH  S+RSL  D   D +I
Sbjct: 122 VMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 168


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