BLASTX nr result

ID: Aconitum21_contig00023426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023426
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    66   3e-09
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    65   6e-09
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    59   5e-07

>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
 Frame = -2

Query: 500 GQVVAIDFDGEPTLEQVMPPVTLLGNGA------YLVEDLSGDLLVVDFK--------SL 363
           G   A+D  G   + ++   + L+ N        YLVE L GDLL+VD           L
Sbjct: 151 GNFYAVDNTGRTVIVRLNTELGLIANPVFGGDKKYLVESL-GDLLLVDMYLSIDTAEGGL 209

Query: 362 RDGKYFM-------------FKVFKLDLIQGKWTEVHNLGDCVLFLSNNGVIARSLSDCP 222
             G+ F+             FKVFKLD     W EV +LGD VLFL ++   + S+SD  
Sbjct: 210 SFGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLS 269

Query: 221 GCERNCIYTTETVFWGPCSQLRFGIYNLKDHIIQARNIG-FPLKLS-----GHFWLRNEL 60
           GC+ NCI+  +  F+     LR       D ++  R+IG F L+       G++    ++
Sbjct: 270 GCKGNCIFFVDNFFYSRDENLRAN--GGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKM 327

Query: 59  FWLDP 45
           FW  P
Sbjct: 328 FWPPP 332


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 53/142 (37%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
 Frame = -2

Query: 503 NGQVVAIDFDGEPTLEQV-MPPVTLL-------GNGAYLVEDLSGDLLVVD--FKSLRDG 354
           NG+  A+D  G   +  +  PPV  L       GN   LVE  +G+LL+V+  F     G
Sbjct: 205 NGEFYAVDNTGRTVVVAIGSPPVLSLIADSVIGGNKKSLVES-NGELLMVNTYFDQGIHG 263

Query: 353 ---KYFMFKVFKLDLIQGKWTEVHNLGDCVLFLSNNGVIARSLSDCPGCERNCIYTTETV 183
              +   FKVFKL+ I   W EV NLGD +LFL      +   S+  GCE NCIY T + 
Sbjct: 264 IMNRAVRFKVFKLNQIGHMWVEVENLGDRILFLGEKSTFSAVASEFCGCEGNCIYYTNSF 323

Query: 182 FWGPCSQ-----LRFGIYNLKD 132
           F+ P  Q        GI+NL++
Sbjct: 324 FF-PNDQEDDAYTGIGIFNLEN 344


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 17/141 (12%)
 Frame = -2

Query: 503 NGQVVAIDFDGEPTLEQV-MPPVTLL-------GNGAYLVEDLSGDLLVVDFK-----SL 363
           NG+  AID  G   +  +  PPV  L       G+   LVE  +G+LL+VD         
Sbjct: 206 NGEFYAIDNTGRTVVVAIGSPPVLSLIADSVFGGDKKSLVES-NGELLMVDTYFGQGIHR 264

Query: 362 RDGKYFMFKVFKLDLIQGKWTEVHNLGDCVLFLSNNGVIARSLSDCPGCERNCIYTTETV 183
           R  +   FKVFKLD I   W EV +LG+ +LFL      +   S+  GCE NCIY T T 
Sbjct: 265 RMKRAVRFKVFKLDQIGHMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTF 324

Query: 182 F----WGPCSQLRFGIYNLKD 132
           F     G  +     I+NL++
Sbjct: 325 FCPNGQGDNAYTAIDIFNLEN 345


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
 Frame = -2

Query: 500 GQVVAIDFDGE-PTLEQVMPPVTLLGNGAYLVEDLSGDLLVVDFKSLRDG------KYFM 342
           GQ+V  D +G  P +  +  P  + G+  YLV    G LLV  +  L         K   
Sbjct: 230 GQIVVCDVNGNSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTAR 289

Query: 341 FKVFKLDLIQGKWTEVHNLGDCVLFLSNNGVIARSLSDCPGCERNCIYTTETV----FWG 174
           F+VFKLDL   +W  V +LGD +LF+  N  +A S S   GC  +CIY T+      + G
Sbjct: 290 FEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDG 349

Query: 173 PCSQLRFGIYNLKDHIIQ 120
              +   GI+ L D  I+
Sbjct: 350 HIGEHDLGIFKLSDGSIE 367


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
 Frame = -2

Query: 500 GQVVAIDFDGE-PTLEQVMPPVTLLGNGAYLVEDLSGDLLVVDFKSLRDG---------- 354
           G +   D  G  P +  +  P    G+  YLVE     LLV  +  L             
Sbjct: 226 GSIAVCDVSGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIY 285

Query: 353 KYFMFKVFKLDLIQGKWTEVHNLGDCVLFLSNNGVIARSLSDCPGCERNCIYTT----ET 186
           +   F+V +LDL   +W  V +LGD  LFL  N  ++ S  D PGC+ NCIY T    E 
Sbjct: 286 RTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345

Query: 185 VFWGPCSQLRFGIYNLKDHIIQARNIGFPLKLSGHFWLR 69
            + G   +   GI+NL+D  I+      PL  S HF +R
Sbjct: 346 NYDGIGGEQDLGIFNLEDGSIE------PLPCS-HFRIR 377


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