BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023282
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   130   8e-29
ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medica...   105   3e-21
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   105   5e-21
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   103   2e-20

>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
           gi|297736046|emb|CBI24084.3| unnamed protein product
           [Vitis vinifera]
          Length = 769

 Score =  130 bits (328), Expect = 8e-29
 Identities = 75/112 (66%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
 Frame = -2

Query: 454 LQCNVPTGQTGQVAAHHLPAGPAGSASDISGSNKTRPNPSESSFKASRESQSGKRKNQDK 275
           LQ NV TGQTG   +  L AGP  S SD+SGS+K+ P PS SSFK  R+ Q GKRK+ D+
Sbjct: 659 LQSNVSTGQTG--LSTQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDRQPGKRKDLDR 716

Query: 274 HEDDETATVQSRPLPRDAFMIRQIRKAR-GVTSQTGSAS-GSMISGEFSGST 125
            EDDETAT QS PLPRD F IRQIRKAR G TSQTGSAS GS  SGE SGST
Sbjct: 717 QEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQTGSASYGSAFSGELSGST 768


>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
           predicted protein [Populus trichocarpa]
          Length = 769

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = -2

Query: 454 LQCNVPTGQTGQVAAHHLPAGPAGSASDISGSNKTRPNPSESSFKASRESQSGKRKNQDK 275
           LQ +VP G+TG+      P     + SD+SGS+++RP PS SSFK +R+ QSGKRK++D+
Sbjct: 657 LQSDVPVGKTGKSGTTQTPMLSGPATSDLSGSSRSRPVPSGSSFK-TRDRQSGKRKDRDR 715

Query: 274 HEDDETATVQSRPLPRDAFMIRQIRKAR--GVTSQTGSAS-GSMISGEFSGST 125
            E+DETATVQS+PLPRD F IRQI+K+R    TSQTGS S GS +SG+ SGST
Sbjct: 716 QEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768


>ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula]
           gi|355493935|gb|AES75138.1| mRNA 3'-end-processing
           protein rna14 [Medicago truncatula]
          Length = 737

 Score =  105 bits (263), Expect = 3e-21
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 3/113 (2%)
 Frame = -2

Query: 454 LQCNVPTGQTGQVAA-HHLPAGPAGSASDISGSNKTRPNPSESSFKASRESQSGKRKNQD 278
           LQ ++PTGQ+ +V     LPAGPA + S++SGS+K+ P  S  S       Q GKRK  D
Sbjct: 624 LQSDLPTGQSVKVGIPSQLPAGPAPATSELSGSSKSHPVQSGLSHMQPGRKQYGKRKQLD 683

Query: 277 KHEDDETATVQSRPLPRDAFMIRQIRKAR-GVTSQTGSAS-GSMISGEFSGST 125
             E+D+T +VQS+PLP+DAF IRQ +KAR G TSQTGS S GS +SG+ SGST
Sbjct: 684 SQEEDDTKSVQSQPLPQDAFRIRQFQKARAGSTSQTGSVSYGSALSGDLSGST 736


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
           gi|223541464|gb|EEF43014.1| plant RNA cleavage
           stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  105 bits (261), Expect = 5e-21
 Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
 Frame = -2

Query: 454 LQCNVPTGQTGQVAAHH-LPAGPAGSASDISGSNKTRPNPSESSFKASRESQSGKRKNQD 278
           LQ  +  GQ G++     +PA PA + SD+SGS+K+RP       K SR+ QSGKRK+ +
Sbjct: 659 LQSELTNGQMGKLGTSPAVPAPPAPATSDLSGSSKSRP-----VLKPSRDRQSGKRKDIE 713

Query: 277 KHEDDETATVQSRPLPRDAFMIRQIRKAR-GVTSQTGSAS-GSMISGEFSGST 125
           + E+DETATVQS+PLPRD F IR  +KAR G  SQTGSAS GS +SG+ SGST
Sbjct: 714 RQEEDETATVQSQPLPRDIFRIRHSQKARVGTASQTGSASYGSALSGDLSGST 766


>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           3-like [Cucumis sativus]
          Length = 460

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/108 (55%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
 Frame = -2

Query: 442 VPTGQTGQVAAHHLPAGPAGSASDISGSNKTRPNPSESSFKASRESQSGKRKNQDKHEDD 263
           VP  ++G   A  +  GP  + SD+SGS+K+    S SS K +R+ QSGKRK+ D+ ED+
Sbjct: 354 VPLVKSGATPAQ-VSGGPVPTTSDLSGSSKSHAF-SNSSLKHTRDKQSGKRKDYDRQEDN 411

Query: 262 ETATVQSRPLPRDAFMIRQIRKARGVT-SQTGSAS-GSMISGEFSGST 125
           E+ TVQS+P+P+D F IRQI+KARG T SQTGSAS GS ISG+ SGST
Sbjct: 412 ESTTVQSQPMPKDXFRIRQIQKARGATSSQTGSASYGSAISGDLSGST 459