BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023218
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   236   2e-61
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   225   5e-57
ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar...   219   4e-55
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   216   3e-54

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Vitis vinifera]
           gi|297744374|emb|CBI37344.3| unnamed protein product
           [Vitis vinifera]
          Length = 497

 Score =  236 bits (601), Expect(2) = 2e-61
 Identities = 111/137 (81%), Positives = 123/137 (89%)
 Frame = -1

Query: 458 SLIQVFELLREQLWYRPNPGVYIKLIVMLGKCKQPEKAHVLFQTMIDEGCIVNHESYTAL 279
           S ++VFELLREQLWYRPN G+YIKLIVMLGKCKQPEKAH LF  MIDEGC+VNHE+YTAL
Sbjct: 120 SALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTAL 179

Query: 278 LSAYSRSGFFDKAFSLLNLMKKTPGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQG 99
           LSAYSRSG FDKAFSLL  MK TP C+PD+ TY++L+KSCLQV AFD+V  LLSDMA+QG
Sbjct: 180 LSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQG 239

Query: 98  IKPNTVTYNTLIDAYGK 48
           IKPNTVTYNTLIDAYGK
Sbjct: 240 IKPNTVTYNTLIDAYGK 256



 Score = 26.2 bits (56), Expect(2) = 2e-61
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -3

Query: 45  RYEEMESTLMEMLR 4
           R+ EMESTL+EMLR
Sbjct: 259 RFAEMESTLLEMLR 272



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
 Frame = -1

Query: 380 VMLGKCKQP---EKAHVLFQTMIDEGCIVNHESYTALLSAYSRSGFFDKAFSLLNLMKKT 210
           V++  C Q    +K  VL   M ++G   N  +Y  L+ AY ++  F +  S L  M + 
Sbjct: 214 VLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLRE 273

Query: 209 PGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQGIKPNTVTYNTLIDAYGKTD 42
             CEPD++T    L++       + ++         GI+PN  T+N L+D+YGK +
Sbjct: 274 GKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAE 329


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Glycine max]
          Length = 515

 Score =  225 bits (574), Expect = 5e-57
 Identities = 106/137 (77%), Positives = 123/137 (89%)
 Frame = -1

Query: 458 SLIQVFELLREQLWYRPNPGVYIKLIVMLGKCKQPEKAHVLFQTMIDEGCIVNHESYTAL 279
           S ++VFELL EQ+WY+P+ GVYIKLIVMLGKCKQPEKAH LFQ M+DEGC+++ ESYTAL
Sbjct: 139 SALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTAL 198

Query: 278 LSAYSRSGFFDKAFSLLNLMKKTPGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQG 99
           LSAYSRSG  DKAFSLL  MK TPGC+PD+ TY+ILLKSCLQV AFD++Q+LLSDM ++G
Sbjct: 199 LSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRG 258

Query: 98  IKPNTVTYNTLIDAYGK 48
           IKPNTVTYNTLIDAYGK
Sbjct: 259 IKPNTVTYNTLIDAYGK 275



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
 Frame = -1

Query: 380 VMLGKCKQP---EKAHVLFQTMIDEGCIVNHESYTALLSAYSRSGFFDKAFSLLNLMKKT 210
           ++L  C Q    +K   L   M + G   N  +Y  L+ AY ++  F +  S+L  M   
Sbjct: 233 ILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLAD 292

Query: 209 PGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQGIKPNTVTYNTLIDAYGK 48
             C+PD++T    L++   +   + ++       + GI+PN  T+N L+D+YGK
Sbjct: 293 RYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGK 346


>ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|222844771|gb|EEE82318.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  220 bits (560), Expect(2) = 1e-55
 Identities = 104/136 (76%), Positives = 115/136 (84%)
 Frame = -1

Query: 446 VFELLREQLWYRPNPGVYIKLIVMLGKCKQPEKAHVLFQTMIDEGCIVNHESYTALLSAY 267
           VFELLREQLWYRP  G+Y+KLIVMLGKCKQP+KAH LFQ MIDEGC V HESYTALLSAY
Sbjct: 16  VFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAY 75

Query: 266 SRSGFFDKAFSLLNLMKKTPGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQGIKPN 87
            RSG FDKAFS++  MK TP C PD+ TY+IL+KSCLQV AFD+VQ LLSDM   GI+PN
Sbjct: 76  GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPN 135

Query: 86  TVTYNTLIDAYGKTDM 39
           TVTYNT+IDAYGK  M
Sbjct: 136 TVTYNTVIDAYGKAKM 151



 Score = 22.3 bits (46), Expect(2) = 1e-55
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 42  YEEMESTLMEML 7
           + EME+TLMEML
Sbjct: 152 FAEMEATLMEML 163


>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48730, chloroplastic; Flags: Precursor
           gi|332008334|gb|AED95717.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  219 bits (558), Expect = 4e-55
 Identities = 105/140 (75%), Positives = 120/140 (85%)
 Frame = -1

Query: 458 SLIQVFELLREQLWYRPNPGVYIKLIVMLGKCKQPEKAHVLFQTMIDEGCIVNHESYTAL 279
           S IQVFELLREQLWY+PN G+Y+KLIVMLGKCKQPEKAH LFQ MI+EGC+VNHE YTAL
Sbjct: 132 SAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191

Query: 278 LSAYSRSGFFDKAFSLLNLMKKTPGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQG 99
           +SAYSRSG FD AF+LL  MK +  C+PD+ TY+IL+KS LQV AFD+VQ LLSDM  QG
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251

Query: 98  IKPNTVTYNTLIDAYGKTDM 39
           I+PNT+TYNTLIDAYGK  M
Sbjct: 252 IRPNTITYNTLIDAYGKAKM 271


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
           chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  216 bits (550), Expect = 3e-54
 Identities = 103/140 (73%), Positives = 120/140 (85%)
 Frame = -1

Query: 458 SLIQVFELLREQLWYRPNPGVYIKLIVMLGKCKQPEKAHVLFQTMIDEGCIVNHESYTAL 279
           S ++VFELLREQLWYRP  G+YIKLIVMLGKCKQ EKA+ LFQ MI+EGC V+HESYTAL
Sbjct: 137 SALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTAL 196

Query: 278 LSAYSRSGFFDKAFSLLNLMKKTPGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQG 99
           LSAYSRSG  D+AFS+LN MK +P C+PD+ TY+IL+KSCLQV AF++ QTLLSDM  +G
Sbjct: 197 LSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRG 256

Query: 98  IKPNTVTYNTLIDAYGKTDM 39
           IKPNT+TYNT IDAYGK  M
Sbjct: 257 IKPNTITYNTFIDAYGKAKM 276



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
 Frame = -1

Query: 380 VMLGKCKQP---EKAHVLFQTMIDEGCIVNHESYTALLSAYSRSGFFDKAFSLLNLMKKT 210
           +++  C Q     KA  L   M+  G   N  +Y   + AY ++  F +  S+L  M   
Sbjct: 231 ILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLND 290

Query: 209 PGCEPDIFTYTILLKSCLQVSAFDRVQTLLSDMADQGIKPNTVTYNTLIDAYGKTD 42
            GC+PD++T    L++  +    + ++       + GI+P+  T+N L+D+YGK +
Sbjct: 291 DGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAE 346