BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023217
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   228   3e-58
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   209   2e-52
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ...   187   8e-46

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  228 bits (582), Expect = 3e-58
 Identities = 112/163 (68%), Positives = 133/163 (81%)
 Frame = -1

Query: 490 MGTKGLCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           M  KGLCDVVS+NT+I A C AS+TKRAYKLFEEMGGKGI PD+VT+TILI    REG +
Sbjct: 316 MEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSS 375

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
            +A++L DQM  + L+PDR+LYTT+VDHLCKTG++  A + F DMVE GI+PDVVSYNAL
Sbjct: 376 NIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNAL 435

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKEE 2
           INGLC+AS V+EAMHLYEDM      PDEVT+KLIIGGLI E+
Sbjct: 436 INGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEK 478



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/151 (33%), Positives = 77/151 (50%)
 Frame = -1

Query: 457 FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQML 278
           +N+LI  FC+A +  +A  +   M   G  PD+VTY +L+N    E     AE L  +M 
Sbjct: 222 YNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKME 281

Query: 277 NMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASMVN 98
              + PD   Y  ++  LCK  R+ +A    ++ +E     DVVSYN +I  LC AS   
Sbjct: 282 RSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTK 341

Query: 97  EAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
            A  L+E+M      PD VT+ ++I   ++E
Sbjct: 342 RAYKLFEEMGGKGITPDVVTFTILIKAFLRE 372



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/154 (28%), Positives = 75/154 (48%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+V++  +I   CRA     A +++  M  KG  PD      L+  L  +G   LA EL 
Sbjct: 148 DIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELT 207

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
              +   +   + +Y ++++  C+ G I +A++    M   G  PD+V+YN L+N  C  
Sbjct: 208 VGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDE 267

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
            ++ EA +L + M      PD  +Y  ++ GL K
Sbjct: 268 LLLEEAENLMKKMERSGVEPDVYSYNELLKGLCK 301



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)
 Frame = -1

Query: 484 TKGLCDVVS--FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           TK  C V S  +N  I    R S    A + ++ M  +G   +  TY+  I+ L +  + 
Sbjct: 36  TKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNF 95

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
            L E+L + M  +  VPD   Y   ++ LC   ++  A      MVEKG  PD+V+Y  +
Sbjct: 96  VLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIV 155

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGL 14
           INGLC+A   + A+ ++ +M      PDE   + ++ GL
Sbjct: 156 INGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/149 (30%), Positives = 71/149 (47%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+ ++N  +   C  +    A  + + M  KG  PDIVTYTI+IN L R G    A E++
Sbjct: 113 DIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIW 172

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
             M+     PD      +V  LC  G++  A    +  +   I      YN+LING C+A
Sbjct: 173 RNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQA 232

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLII 23
             +++A  +   M      PD VTY +++
Sbjct: 233 GWIDKAQSIISFMRRNGCEPDLVTYNVLL 261



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/154 (27%), Positives = 71/154 (46%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+V++N L+   C     + A  L ++M   G+ PD+ +Y  L+  L +      A  + 
Sbjct: 253 DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM 312

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
              +    + D + Y T++  LC     ++A   F +M  KGI+PDVV++  LI    + 
Sbjct: 313 VNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLRE 372

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
              N A  L + M  +   PD V Y  I+  L K
Sbjct: 373 GSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCK 406



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/152 (26%), Positives = 69/152 (45%)
 Frame = -1

Query: 463 VSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQ 284
           +++   I ++ +A    +A K F+EM         + Y   I  L R+    LAE+ +D+
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 283 MLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASM 104
           M+      +   Y+  +  LCK            DM   G  PD+ +YN  +N LC  + 
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 103 VNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
           ++ A+ + + M      PD VTY ++I GL +
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCR 161



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/119 (27%), Positives = 55/119 (46%)
 Frame = -1

Query: 475 LCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEE 296
           L D V + T++   C+      A+ +F +M   GI PD+V+Y  LIN L R      A  
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMH 450

Query: 295 LFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGL 119
           L++ M      PD + +  ++  L    ++  A   +  M+EKG + D      L+N +
Sbjct: 451 LYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/162 (62%), Positives = 124/162 (76%)
 Frame = -1

Query: 490 MGTKGLCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           M  KG CDVVS+NT+I AFC  S  +RAYKLFEEMG KGI PD+VT+TILI    REG++
Sbjct: 317 MVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNS 376

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
            +A++L D M  M L+PDRI YTT++DH CK+G+++ A + F DMVEKGI+PDVVSYNAL
Sbjct: 377 DMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNAL 436

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
           ING CK+  V E MHLYE M    + PDEVTYKLIIG L++E
Sbjct: 437 INGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRE 478



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
 Frame = -1

Query: 478 GLCDVVS--FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYL 305
           GL +V +  +N LI  FCRA    +A  +   M   G  PD+VTY +L+N    E     
Sbjct: 214 GLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEE 273

Query: 304 AEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFL-DMVEKGISPDVVSYNALI 128
           A +L  +M    + PD   Y  ++   CK     +A  F +  MV KG   DVVSYN +I
Sbjct: 274 AVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTII 332

Query: 127 NGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
              C  S    A  L+E+M      PD VT+ ++I   ++E
Sbjct: 333 KAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLRE 373



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 36/182 (19%)
 Frame = -1

Query: 460 SFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQM 281
           +++  I   C+         L ++M      PDI  + I +N LFRE     A E+F +M
Sbjct: 81  TYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRM 140

Query: 280 LNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPD----------------- 152
           +     PD + +T ++D LCK  +   A  F+L+M++KGI PD                 
Sbjct: 141 VERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQV 200

Query: 151 ---------VVS----------YNALINGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKL 29
                    V+S          YNALI+G C+A  +++A+ +   M     +PD VTY +
Sbjct: 201 DLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNV 260

Query: 28  II 23
           ++
Sbjct: 261 LL 262



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/119 (28%), Positives = 60/119 (50%)
 Frame = -1

Query: 475 LCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEE 296
           L D + + T+I   C++   + A+ +F +M  KGI PD+V+Y  LIN   +         
Sbjct: 392 LPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMH 451

Query: 295 LFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGL 119
           L++QML     PD + Y  ++  L +  ++  A   +  M+E+G++ D      LIN +
Sbjct: 452 LYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAI 510



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
 Frame = -1

Query: 463 VSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQ 284
           + +N  I    R S    A+  + +M   G      TY+  I+ L +       + L   
Sbjct: 45  IDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKD 104

Query: 283 MLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASM 104
           M  ++ VPD   +   ++ L +  R + A   F  MVE+G  PDVV++  +I+GLCK   
Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164

Query: 103 VNEAMHLYEDMCHIMTRPD-----------------EVTYKLIIG 20
            + A+  + +M     RPD                 ++ Y+LIIG
Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIG 209



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/150 (24%), Positives = 62/150 (41%)
 Frame = -1

Query: 457 FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQML 278
           + T I ++ +A     A K+F+EM         + Y   I  L R     LA   + +M 
Sbjct: 12  YRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMA 71

Query: 277 NMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASMVN 98
            +        Y+  +  LC+T           DM +    PD+ ++N  +N L + +   
Sbjct: 72  PLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREE 131

Query: 97  EAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
            A+ ++  M      PD VT+ +II GL K
Sbjct: 132 SALEVFGRMVERGREPDVVTFTIIIDGLCK 161


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  209 bits (532), Expect = 2e-52
 Identities = 101/163 (61%), Positives = 126/163 (77%)
 Frame = -1

Query: 490 MGTKGLCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           M  KGLCDVVS+NT+I AFC+   T  AYKLFEEMG KGI PD+VT+TI I     +G  
Sbjct: 317 MWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSF 376

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
            +A++L DQM  M L PD I YTT++DHLCK+G+++ A + F DMVE+GISPDV+S+NAL
Sbjct: 377 NIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNAL 436

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKEE 2
           ING CK S V+EAMHLYE+M +  + PDEVTYKLIIGGLI+E+
Sbjct: 437 INGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEK 479



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
 Frame = -1

Query: 490 MGTKGLC-DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGH 314
           MGT+G      +++  I   C+        +L  +M      PDI  + I ++ LF EG 
Sbjct: 70  MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129

Query: 313 TYLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNA 134
             LA E+F++++     PD + YT ++  +CK  +   A  F+ DM+ KG SPD  +  A
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189

Query: 133 LINGLCKASMVNEAMHLYED-MCHIMTRPDEVTYKLIIGGLIK 8
           ++ GLC    V+ A  L  D M     +   + Y  +I G  +
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCR 232



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/150 (28%), Positives = 66/150 (44%)
 Frame = -1

Query: 463 VSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQ 284
           + +N  I      S    A   + +MG +G      TY+  I  L +  +    +EL   
Sbjct: 45  IDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHD 104

Query: 283 MLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASM 104
           M  +N +PD   +   +  L   GRI  A   F  +V+ G  PDVV+Y  +I+G+CK   
Sbjct: 105 METLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKK 164

Query: 103 VNEAMHLYEDMCHIMTRPDEVTYKLIIGGL 14
            + A+  + DM H    PD      I+ GL
Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           DVV++  +I   C+      A + + +M  KG  PD      ++  L       LA EL 
Sbjct: 148 DVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELI 207

Query: 289 -DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCK 113
            D M +  +    ++Y  ++   C+ GRI +A+     M   G  PD+V+YN  +N  C 
Sbjct: 208 IDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCD 267

Query: 112 ASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
             M+++A  L + M      PD  +Y  ++ G+ K
Sbjct: 268 ELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           DV+SFN LI  FC+ S    A  L+EEM  +G +PD VTY ++I  L  E    +A  ++
Sbjct: 429 DVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVW 488

Query: 289 DQMLNMNLVPDRILYTTMV 233
            QM++     DR +  T++
Sbjct: 489 GQMMDKGFTLDRAIAQTLI 507



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/116 (26%), Positives = 58/116 (50%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D + + T+I   C++   + A+ +F +M  +GI PD++++  LIN   +      A  L+
Sbjct: 394 DCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLY 453

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALING 122
           ++M N    PD + Y  ++  L +  +I  A   +  M++KG + D      LI G
Sbjct: 454 EEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
 Frame = -1

Query: 448 LIVAFCRASYTKRAYKLFEEMGGKG-IFPDIVTYTILINTLFREGHTYLAEELFDQMLNM 272
           ++V  C       AY+L  ++   G +    + Y  LI+   R G    A+ +   M   
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249

Query: 271 NLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASMVNEA 92
              PD + Y   +++ C    +  A+     M   GI PDV SYN L+ G+CK +  ++A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309

Query: 91  MHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
             L  +        D V+Y  II    K
Sbjct: 310 YLLMTNKMWPKGLCDVVSYNTIIKAFCK 337


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  202 bits (515), Expect = 2e-50
 Identities = 93/161 (57%), Positives = 124/161 (77%)
 Frame = -1

Query: 490 MGTKGLCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           M TKG+CDVVS+NT+I AFC+A  T++ Y+LFEEM GKGI PD+VT+ ILI+   REG T
Sbjct: 321 MQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGST 380

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
           ++ ++L D+M  M ++PD I YT +VDHLCK G++  A + F DMVE G++PDV+SYNAL
Sbjct: 381 HVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNAL 440

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
           +NG CK S V +AMHL+++M      PDEVTYKLI+GGLI+
Sbjct: 441 LNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/151 (33%), Positives = 74/151 (49%)
 Frame = -1

Query: 457 FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQML 278
           +N LI  FCR     +A K+   M   G  PD+VTY IL+N    EG    A  L + M 
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286

Query: 277 NMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASMVN 98
              + PD   Y  ++   CK   + +A    ++ ++     DVVSYN +I   CKA    
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR 346

Query: 97  EAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
           +   L+E+MC    RPD VT+ ++I   ++E
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLRE 377



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/155 (30%), Positives = 83/155 (53%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+ +FNT +   CR +  + A +LF  M  KG  PD+V+YTI+I+ L        A +++
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
            ++++  L PD      +V  LC  GR+  A    + +++ G+  + + YNALI+G C+ 
Sbjct: 178 RRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRM 237

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
             V++AM +   M      PD VTY +++    +E
Sbjct: 238 GRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEE 272



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/154 (31%), Positives = 76/154 (49%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           DVVS+  +I A C A     A K++  +  KG+ PD      L+  L   G   LA EL 
Sbjct: 153 DVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELV 212

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
             ++   +  + ++Y  ++D  C+ GR+ +A      M   G  PD+V+YN L+N  C+ 
Sbjct: 213 VGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEE 272

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
            MV+EA+ L E M      PD  +Y  ++ G  K
Sbjct: 273 GMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/154 (25%), Positives = 71/154 (46%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+V++N L+   C       A +L E M   G+ PD+ +Y  L+    +      A  + 
Sbjct: 258 DLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMM 317

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
            + +    + D + Y T++   CK  R ++    F +M  KGI PD+V++N LI+   + 
Sbjct: 318 VERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLRE 377

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
              +    L ++M  +   PD + Y  ++  L K
Sbjct: 378 GSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
 Frame = -1

Query: 460 SFNTLIVAFCRASYTKRA---YKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           +++  I A C A         + L  +M   G  PDI  +   +N L R+     A ELF
Sbjct: 83  TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
             M +    PD + YT ++D LC   R  +A   +  +++KG+SPD  +  AL+ GLC  
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202

Query: 109 SMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
             V+ A  L   +     + + + Y  +I G  +
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/80 (38%), Positives = 47/80 (58%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           DV+S+N L+  FC+ S    A  LF+EM  KG++PD VTY +++  L R     LA  ++
Sbjct: 433 DVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVW 492

Query: 289 DQMLNMNLVPDRILYTTMVD 230
           DQM+      +R L  T+V+
Sbjct: 493 DQMMERGFTLNRHLSETLVN 512



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/119 (25%), Positives = 57/119 (47%)
 Frame = -1

Query: 475 LCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEE 296
           L D + +  ++   C+      A+ +F +M   G+ PD+++Y  L+N   +      A  
Sbjct: 396 LPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMH 455

Query: 295 LFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGL 119
           LFD+M +  L PD + Y  +V  L +  +I  A   +  M+E+G + +      L+N +
Sbjct: 456 LFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514


>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335822|gb|EFH66239.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score =  187 bits (475), Expect = 8e-46
 Identities = 90/163 (55%), Positives = 121/163 (74%)
 Frame = -1

Query: 490 MGTKGLCDVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHT 311
           M  +G CDVVS++TLI  FCRAS TK+AYKLFEEM  KGI  ++VT+T LI    REG++
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNS 376

Query: 310 YLAEELFDQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNAL 131
            +A++L DQM  + L PDRI YTT++DHLCK+G + +A   F DM+E  I+PD +SYN+L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSL 436

Query: 130 INGLCKASMVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKEE 2
           I+GLC++  V EA+ L+EDM      PDE+T+K IIGGLI+E+
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREK 479



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D+ +FN  +   CR +    A + F  M  +G  PD+V+YTILIN LFR G    A E++
Sbjct: 113 DIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKG-ISPDVVSYNALINGLCK 113
           + M+   + PD      +V  LC   ++  A     + ++   +   +V YNALI+G CK
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCK 232

Query: 112 ASMVNEAMHLYEDMCHIMTRPDEVTYKLII 23
           A  + +A  L   M  I   PD VTY +++
Sbjct: 233 AGRIEKAEALKSFMSKIGCEPDLVTYNVLL 262



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/154 (29%), Positives = 74/154 (48%)
 Frame = -1

Query: 466 VVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFD 287
           +V +N LI  FC+A   ++A  L   M   G  PD+VTY +L+N  +       AE +  
Sbjct: 220 IVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMT 279

Query: 286 QMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKAS 107
           +M+   +  D   Y  ++   C+     +  +F L  +E     DVVSY+ LI   C+AS
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRAS 339

Query: 106 MVNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIKE 5
              +A  L+E+M       + VT+  +I   ++E
Sbjct: 340 NTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLRE 373



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/148 (28%), Positives = 68/148 (45%)
 Frame = -1

Query: 457 FNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQML 278
           +N  I    + S  + A  ++ +M   G      TY+  I+ L +     L + L   M 
Sbjct: 47  YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDME 106

Query: 277 NMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASMVN 98
            +  +PD   +   +D LC+  ++  A   F  MV++G  PDVVSY  LINGL +A  V 
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166

Query: 97  EAMHLYEDMCHIMTRPDEVTYKLIIGGL 14
           +A+ ++  M      PD      ++ GL
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGL 194



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/152 (23%), Positives = 66/152 (43%)
 Frame = -1

Query: 463 VSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELFDQ 284
           +++ + I    ++     A ++F+EM           Y   I  L +E    LAE ++  
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 283 MLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKASM 104
           M+ M        Y+  +  LCK  + +       DM   G  PD+ ++N  ++ LC+ + 
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 103 VNEAMHLYEDMCHIMTRPDEVTYKLIIGGLIK 8
           V  A+  +  M      PD V+Y ++I GL +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFR 161



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/83 (36%), Positives = 46/83 (55%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D +S+N+LI   CR+     A KLFE+M GK   PD +T+  +I  L RE     A +++
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVW 488

Query: 289 DQMLNMNLVPDRILYTTMVDHLC 221
           DQM++     DR +  T++   C
Sbjct: 489 DQMMDKGFTLDRDVSDTLIKASC 511



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/121 (26%), Positives = 58/121 (47%)
 Frame = -1

Query: 469 DVVSFNTLIVAFCRASYTKRAYKLFEEMGGKGIFPDIVTYTILINTLFREGHTYLAEELF 290
           D + + T++   C++    +AY +F +M    I PD ++Y  LI+ L R G    A +LF
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453

Query: 289 DQMLNMNLVPDRILYTTMVDHLCKTGRIQQARTFFLDMVEKGISPDVVSYNALINGLCKA 110
           + M      PD + +  ++  L +  ++  A   +  M++KG + D    + LI   C  
Sbjct: 454 EDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513

Query: 109 S 107
           S
Sbjct: 514 S 514