BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023215
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subun...   110   5e-27
ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatu...   102   8e-25
ref|YP_006665813.1| ribosomal protein S11 (chloroplast) [Elodea ...   113   1e-23
gb|ADD30141.1| ribosomal protein S11 [Heuchera sanguinea]             113   1e-23
gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]               113   1e-23

>ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Cucumis
           sativus]
          Length = 466

 Score =  110 bits (274), Expect(2) = 5e-27
 Identities = 58/80 (72%), Positives = 60/80 (75%)
 Frame = -1

Query: 404 VSWSSAXXXXXXXXXXXTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 225
           +SWSSA           TPF        AIR VVDQGMQRAEVMIKGPGLGRDAALRAIR
Sbjct: 51  ISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRGVVDQGMQRAEVMIKGPGLGRDAALRAIR 110

Query: 224 RSGILLSFVRDVTPMPHNGC 165
           RSGILLSF+RDVTPMPHNGC
Sbjct: 111 RSGILLSFIRDVTPMPHNGC 130



 Score = 35.8 bits (81), Expect(2) = 5e-27
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -3

Query: 57  REKVAASTRTLQWKCVESR 1
           R+K+  STRTL+WKCVESR
Sbjct: 136 RQKIRVSTRTLKWKCVESR 154


>ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula]
           gi|355507111|gb|AES88253.1| 30S ribosomal protein S11
           [Medicago truncatula]
          Length = 466

 Score =  102 bits (255), Expect(2) = 8e-25
 Identities = 54/80 (67%), Positives = 58/80 (72%)
 Frame = -1

Query: 404 VSWSSAXXXXXXXXXXXTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 225
           +SWSSA           TPF        AIRTVVDQGMQRA V+IKGPGLGRDAALRAI 
Sbjct: 51  ISWSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIA 110

Query: 224 RSGILLSFVRDVTPMPHNGC 165
           RSGILL F+RDVTP+PHNGC
Sbjct: 111 RSGILLRFIRDVTPIPHNGC 130



 Score = 35.8 bits (81), Expect(2) = 8e-25
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -3

Query: 57  REKVAASTRTLQWKCVESR 1
           R+KV  S RTLQWKCVESR
Sbjct: 136 RQKVKVSARTLQWKCVESR 154


>ref|YP_006665813.1| ribosomal protein S11 (chloroplast) [Elodea canadensis]
           gi|374094630|gb|AEY84686.1| ribosomal protein S11
           (chloroplast) [Elodea canadensis]
          Length = 138

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/80 (76%), Positives = 61/80 (76%)
 Frame = -1

Query: 404 VSWSSAXXXXXXXXXXXTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 225
           VSWSSA           TPF        AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR
Sbjct: 51  VSWSSAGTSGFKGTRRGTPFAAQAAAINAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 110

Query: 224 RSGILLSFVRDVTPMPHNGC 165
           RSGILLSFVRDVTPMPHNGC
Sbjct: 111 RSGILLSFVRDVTPMPHNGC 130


>gb|ADD30141.1| ribosomal protein S11 [Heuchera sanguinea]
          Length = 138

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/80 (76%), Positives = 61/80 (76%)
 Frame = -1

Query: 404 VSWSSAXXXXXXXXXXXTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 225
           VSWSSA           TPF        AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR
Sbjct: 51  VSWSSAGTCGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 110

Query: 224 RSGILLSFVRDVTPMPHNGC 165
           RSGILLSFVRDVTPMPHNGC
Sbjct: 111 RSGILLSFVRDVTPMPHNGC 130


>gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]
          Length = 138

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/80 (76%), Positives = 61/80 (76%)
 Frame = -1

Query: 404 VSWSSAXXXXXXXXXXXTPFXXXXXXXXAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 225
           VSWSSA           TPF        AIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR
Sbjct: 51  VSWSSAGTCGFSGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIR 110

Query: 224 RSGILLSFVRDVTPMPHNGC 165
           RSGILLSFVRDVTPMPHNGC
Sbjct: 111 RSGILLSFVRDVTPMPHNGC 130