BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023186
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34194.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   165   4e-39
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   163   1e-38
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata...   163   1e-38
ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medic...   156   1e-36

>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  165 bits (417), Expect = 4e-39
 Identities = 88/167 (52%), Positives = 112/167 (67%), Gaps = 7/167 (4%)
 Frame = -1

Query: 480  GSKVIYPLNSVGEVYHDLAKKDGISLTDCVHNAKEFSITSMSGGYRRVFQKPLDFEWELL 301
            GS+ IYP N + +VYHD AKKD ISLT+  H+ KEFSIT+M+GG+RRVFQKP+DFEWELL
Sbjct: 509  GSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELL 568

Query: 300  RYTDGDVPLAETDLDIIAKSKPVNII--EEKTN---PENG--CIDHNKQLENLKNETTLG 142
             YT+G++PLAETD D I KSKP NII  E+  N    EN   C+  ++  E+  N +T  
Sbjct: 569  TYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNLSTDN 628

Query: 141  SKTXXXXXXXXXXXXDSVHNTDIQSQLALKLAFTLPASCYATMAIRE 1
            ++                 +   ++Q ALKL+FTLPASCYATMAIRE
Sbjct: 629  NEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRE 675


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  165 bits (417), Expect = 4e-39
 Identities = 88/167 (52%), Positives = 112/167 (67%), Gaps = 7/167 (4%)
 Frame = -1

Query: 480  GSKVIYPLNSVGEVYHDLAKKDGISLTDCVHNAKEFSITSMSGGYRRVFQKPLDFEWELL 301
            GS+ IYP N + +VYHD AKKD ISLT+  H+ KEFSIT+M+GG+RRVFQKP+DFEWELL
Sbjct: 510  GSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELL 569

Query: 300  RYTDGDVPLAETDLDIIAKSKPVNII--EEKTN---PENG--CIDHNKQLENLKNETTLG 142
             YT+G++PLAETD D I KSKP NII  E+  N    EN   C+  ++  E+  N +T  
Sbjct: 570  TYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQCMKQSESFEHNVNLSTDN 629

Query: 141  SKTXXXXXXXXXXXXDSVHNTDIQSQLALKLAFTLPASCYATMAIRE 1
            ++                 +   ++Q ALKL+FTLPASCYATMAIRE
Sbjct: 630  NEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATMAIRE 676


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  163 bits (413), Expect = 1e-38
 Identities = 88/160 (55%), Positives = 107/160 (66%)
 Frame = -1

Query: 480  GSKVIYPLNSVGEVYHDLAKKDGISLTDCVHNAKEFSITSMSGGYRRVFQKPLDFEWELL 301
            GS+VIYP N + E+YHDLAKKDGISLT+ +H  KEFSITSM+GGYRRVFQKP+DFEWELL
Sbjct: 547  GSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELL 606

Query: 300  RYTDGDVPLAETDLDIIAKSKPVNIIEEKTNPENGCIDHNKQLENLKNETTLGSKTXXXX 121
             YTD + PLAETDLD I  +KPV  +      E+  +  +    +   ET L  +T    
Sbjct: 607  TYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNPHD-SGETNLKDQTDSNE 665

Query: 120  XXXXXXXXDSVHNTDIQSQLALKLAFTLPASCYATMAIRE 1
                    DS      Q+Q+ALK+A TLP+SCYATMAIRE
Sbjct: 666  AEKDTGNPDSE-----QTQMALKMALTLPSSCYATMAIRE 700


>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
            gi|297330312|gb|EFH60731.1| pseudouridylate synthase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  163 bits (413), Expect = 1e-38
 Identities = 91/172 (52%), Positives = 108/172 (62%), Gaps = 12/172 (6%)
 Frame = -1

Query: 480  GSKVIYPLNSVGEVYHDLAKKDGISLTDCVHNAKEFSITSMSGGYRRVFQKPLDFEWELL 301
            GS+VIYP N + E+YHDLAKKDGISLT+ +H  KEFSITSM+GGYRRVFQKP+DFEWELL
Sbjct: 542  GSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKPIDFEWELL 601

Query: 300  RYTDGDVPLAETDLDIIAKSKPVNII-----------EEKTNPENGCIDHNKQLENLKNE 154
             YTD + PLAETDLD I   KPV+ +           +  TNP   C        NLK++
Sbjct: 602  TYTDSNKPLAETDLDRITVYKPVDKVGSAEEIEDEPLKSDTNPHESC------ETNLKDQ 655

Query: 153  TTLGSKTXXXXXXXXXXXXDSVHNTDI-QSQLALKLAFTLPASCYATMAIRE 1
            T                      N D  Q+Q+ALK+A TLP+SCYATMAIRE
Sbjct: 656  T------------DSKEDEKDTRNPDSEQTQMALKMALTLPSSCYATMAIRE 695


>ref|XP_003626418.1| Pseudouridylate synthase-like protein [Medicago truncatula]
           gi|355501433|gb|AES82636.1| Pseudouridylate
           synthase-like protein [Medicago truncatula]
          Length = 669

 Score =  156 bits (395), Expect = 1e-36
 Identities = 88/166 (53%), Positives = 106/166 (63%), Gaps = 6/166 (3%)
 Frame = -1

Query: 480 GSKVIYPLNSVGEVYHDLAKKDGISLTDCVHNAKEFSITSMSGGYRRVFQKPLDFEWELL 301
           GS+ IYP N + EVY+DL  KDGISLTD VHNAKEFSITS++G YRRVFQKP+DFEWELL
Sbjct: 501 GSRSIYPTNDIVEVYNDLTSKDGISLTDSVHNAKEFSITSVTGSYRRVFQKPIDFEWELL 560

Query: 300 RYTDGDVPLAETDLDIIAKSKPVNI-----IEEKTNPENGCIDHNKQLENLKNETTLGSK 136
            YTD + PL ETDLD I KSKP+ +     + E+      CI   +  ++   E  L   
Sbjct: 561 TYTDSNKPLVETDLDKIGKSKPIIVNTVCALNEQKEKVFDCISQLESSDDAPKEVIL--- 617

Query: 135 TXXXXXXXXXXXXDSVHNTDIQ-SQLALKLAFTLPASCYATMAIRE 1
                        +SVH++  Q S  ALKL FTLP+S YATMAIRE
Sbjct: 618 ----------PHDESVHDSSSQDSHTALKLTFTLPSSSYATMAIRE 653