BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023072
         (1817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   632   e-179
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   610   e-172
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   561   e-157
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   561   e-157
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar...   554   e-155

>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
            [Vitis vinifera]
          Length = 612

 Score =  632 bits (1630), Expect = e-179
 Identities = 304/461 (65%), Positives = 380/461 (82%)
 Frame = +2

Query: 2    FDEMPERDVVSWNTMVIMFAKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEF 181
            FD+MPE+DVVSWNTMVI  A+ G++ +AL FY++FR+L I  N FSFAGVL  CVKL+E 
Sbjct: 149  FDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKE- 207

Query: 182  WLPLTKQVHGQVLVSGFLSNLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
             + LT+QVHGQ+LV+GFLSN+VLSSS++DAY K G+MGDA+++FD+M  +DVLAWTTMVS
Sbjct: 208  -VGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVS 266

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYAK GDM++A  LF E+PE NPVSWT+LISGYAR G+G +AL+LF+ MM   ++PDQFT
Sbjct: 267  GYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFT 326

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIG 721
            F             KHGK IH +L+R  F+PN IVVS+LIDMYSKCGSLG+GR VFD++G
Sbjct: 327  FSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMG 386

Query: 722  DKLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNACSHSGLVEEGI 901
            +KLDV+LWNT+ISALAQHG GEE+I++  DM R G KPD+ T VV+LNACSHSGLV++G+
Sbjct: 387  NKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGL 446

Query: 902  HLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDGKVWNALLGACKI 1081
            + FES++ DYGI   QEHYACL+DLLGRAG F+E+ D L+KMPYKPD +VWNALLG C+I
Sbjct: 447  NFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRI 506

Query: 1082 HGNIELGSIAAEHLIDQEPQSSAAYVLLSNMYALTGKWESVEKVRHLMNERQVKKEQAIS 1261
            HG+IELG  AAE LI+ EPQSS AYVLLS++YA+ G+WESV+KVR LMNERQVKKE+AIS
Sbjct: 507  HGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAIS 566

Query: 1262 WVEVESKVHSFSVFDHLHPSKDEIYLALEQLTGQMDDETSL 1384
            W+E+E+KVHSFSV D  HP K++IY  LEQL GQM+++ SL
Sbjct: 567  WLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQMEEDASL 607



 Score =  145 bits (366), Expect = 3e-32
 Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 32/329 (9%)
 Frame = +2

Query: 197  KQVHGQVLVSGFLS-NLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVSGYAK 373
            K+VH  + ++G       LS+ +++ YAK G   +A++VFD+M  +++ +W  M+SGYAK
Sbjct: 79   KRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAK 138

Query: 374  LGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFTFXXX 553
            LG ++ AR+LFD++PE + VSW +++  +A+ G   EAL+ +S+    GI+ + F+F   
Sbjct: 139  LGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGV 198

Query: 554  XXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIGDKLD 733
                         + +HG ++   F  N ++ SS++D Y KCG +G  R +FD +  + D
Sbjct: 199  LTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSAR-D 257

Query: 734  VILWNTM-------------------------------ISALAQHGLGEESIKLFHDMTR 820
            V+ W TM                               IS  A++G+G ++++LF  M  
Sbjct: 258  VLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMML 317

Query: 821  VGTKPDRTTLVVVLNACSHSGLVEEGIHLFESITQDYGIAADQEHYACLVDLLGRAGKFK 1000
               +PD+ T    L AC+    ++ G  +   + +      +    + L+D+  + G   
Sbjct: 318  FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLR-INFQPNTIVVSALIDMYSKCGSLG 376

Query: 1001 ELKDLLKKMPYKPDGKVWNALLGACKIHG 1087
              + +   M  K D  +WN ++ A   HG
Sbjct: 377  IGRKVFDLMGNKLDVVLWNTIISALAQHG 405



 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
 Frame = +2

Query: 482 EALKLFSDMMTRGIKPDQFTFXXXXXXXXXXXXXKHGKSIHGHLIRT-LFKPNAIVVSSL 658
           EA+    ++  RG++ D  T              + GK +H HL  T L +P   + + L
Sbjct: 42  EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101

Query: 659 IDMYSKCGSLGVGRSVFDIIG---------------------------DKL---DVILWN 748
           I+MY+KCG     R VFD +                            DK+   DV+ WN
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161

Query: 749 TMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNAC 871
           TM+ A AQ G  +E+++ + +  ++G + +  +   VL  C
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVC 202


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  610 bits (1573), Expect = e-172
 Identities = 294/460 (63%), Positives = 370/460 (80%)
 Frame = +2

Query: 2    FDEMPERDVVSWNTMVIMFAKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEF 181
            FD+MPE+DVVSWNTMVI +AK+GF  DAL FY + R+L IG+NE+SFAG+L  CVK++E 
Sbjct: 140  FDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKE- 198

Query: 182  WLPLTKQVHGQVLVSGFLSNLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
             L L+KQ HGQVLV+GFLSNLV+SSS++DAYAK   MGDA+R+FD+M ++DVLAWTTMVS
Sbjct: 199  -LELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVS 257

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYA+ GD+E AR LFD +PE NPV+WTSLI+GYAR  LG +AL+LF+ MM   I+PDQFT
Sbjct: 258  GYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFT 317

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIG 721
            F              HGK IHG+LIRT  +PN IVVSSLIDMYSKCG L VGR VFD++G
Sbjct: 318  FSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMG 377

Query: 722  DKLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNACSHSGLVEEGI 901
            DK DV+LWNT+IS+LAQHG G+E+I++F DM R+G KPDR TL+V+LNACSHSGLV+EG+
Sbjct: 378  DKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGL 437

Query: 902  HLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDGKVWNALLGACKI 1081
             L+ESIT  +G+  +QEHYACL+DLLGRAG F  L + L+KMP KP+ ++WNALLG C++
Sbjct: 438  RLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRM 497

Query: 1082 HGNIELGSIAAEHLIDQEPQSSAAYVLLSNMYALTGKWESVEKVRHLMNERQVKKEQAIS 1261
            HGNIE G   AE +I+ +PQSSAAYVLLS+++A  G+WE VE VR LMNER V+K++AIS
Sbjct: 498  HGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAIS 557

Query: 1262 WVEVESKVHSFSVFDHLHPSKDEIYLALEQLTGQMDDETS 1381
            W+E+E+KVHSF+  D LHP K+ IYLAL+QL G M++  S
Sbjct: 558  WIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHMEEVLS 597



 Score =  142 bits (359), Expect = 2e-31
 Identities = 89/332 (26%), Positives = 164/332 (49%), Gaps = 31/332 (9%)
 Frame = +2

Query: 185  LPLTKQVHGQVLVSGFLS-NLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
            L L K VH  + V+G    N  L++ +++ Y+K G    A +VFD+M  +++ +W  M+S
Sbjct: 66   LKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLS 125

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYAKLG ++ AR+LFD++PE + VSW +++  YA++G   +AL+ + ++   GI  ++++
Sbjct: 126  GYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYS 185

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFD--I 715
            F             +  K  HG ++   F  N ++ SS++D Y+KC  +G  R +FD  I
Sbjct: 186  FAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMI 245

Query: 716  IGDKL----------------------------DVILWNTMISALAQHGLGEESIKLFHD 811
            I D L                            + + W ++I+  A+H LG ++++LF  
Sbjct: 246  IRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTK 305

Query: 812  MTRVGTKPDRTTLVVVLNACSHSGLVEEGIHLFESITQDYGIAADQEHYACLVDLLGRAG 991
            M  +  +PD+ T    L A +    +  G  +   + +   I  +    + L+D+  + G
Sbjct: 306  MMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRT-NIRPNTIVVSSLIDMYSKCG 364

Query: 992  KFKELKDLLKKMPYKPDGKVWNALLGACKIHG 1087
              +  + +   M  K D  +WN ++ +   HG
Sbjct: 365  CLEVGRLVFDLMGDKWDVVLWNTIISSLAQHG 396


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like
            [Cucumis sativus]
          Length = 611

 Score =  561 bits (1447), Expect = e-157
 Identities = 276/458 (60%), Positives = 350/458 (76%)
 Frame = +2

Query: 2    FDEMPERDVVSWNTMVIMFAKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEF 181
            FD M E+DVVSWNT+V+ +AK G F +A+  Y  FR+L++GFN FSFAGVLI CVKL+E 
Sbjct: 152  FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKE- 210

Query: 182  WLPLTKQVHGQVLVSGFLSNLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
             L L KQVHGQVLV+GFLSNLVLSSSIVDAY+K G M  A+ +FD+M VKD+ AWTT+VS
Sbjct: 211  -LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVS 269

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYAK GDM +A  LF ++PE NPVSW++LISGYAR  LG EAL  F+ MM  GI P+Q+T
Sbjct: 270  GYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYT 329

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIG 721
            F             KHGK +HG+LIRT F+ N IVVSSLIDMYSKCG L     VF ++G
Sbjct: 330  FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMG 389

Query: 722  DKLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNACSHSGLVEEGI 901
            +K DV++WNTMISALAQ+G GE+++++F+DM   G KPDR T +V+L+ACSHSGLV+EG+
Sbjct: 390  NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGL 449

Query: 902  HLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDGKVWNALLGACKI 1081
              F+++T D+G+  DQEHYACL+DLLGRAG F EL + L+ M  KPD +VW+ALLG C+I
Sbjct: 450  RFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRI 509

Query: 1082 HGNIELGSIAAEHLIDQEPQSSAAYVLLSNMYALTGKWESVEKVRHLMNERQVKKEQAIS 1261
            H NIELG   AE +I+ +PQSSAAYV L+++YA  GKWESVEKVR LM+E+ ++KE+ IS
Sbjct: 510  HNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGIS 569

Query: 1262 WVEVESKVHSFSVFDHLHPSKDEIYLALEQLTGQMDDE 1375
            W++V +K HSF   D LHP K+EIYL LEQL    +++
Sbjct: 570  WIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEED 607



 Score =  141 bits (355), Expect = 7e-31
 Identities = 96/377 (25%), Positives = 177/377 (46%), Gaps = 31/377 (8%)
 Frame = +2

Query: 59   AKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEFWLPLTKQVHGQVLVSGFLS 238
            +  G   +AL + ++  +  I      F  +L  C K + F     K VH  +  +GF  
Sbjct: 38   SSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYF--KGGKCVHLHLKHTGFKR 95

Query: 239  -NLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVSGYAKLGDMETARRLFDEI 415
               ++++ ++  Y + G   +A++VFD+M V+++ +W  M++GYAKLGD+  AR+LFD +
Sbjct: 96   PTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM 155

Query: 416  PEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFTFXXXXXXXXXXXXXKHGK 595
             E + VSW +++  YA+ G   EA+ L+ D     +  + F+F             +  K
Sbjct: 156  MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAK 215

Query: 596  SIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDII------------------G 721
             +HG ++   F  N ++ SS++D YSKCG +   R++FD +                  G
Sbjct: 216  QVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWG 275

Query: 722  D------------KLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLN 865
            D            + + + W+ +IS  A++ LG E++  F  M + G  P++ T    L 
Sbjct: 276  DMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLC 335

Query: 866  ACSHSGLVEEGIHLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDG 1045
            AC+    ++ G  +   + + Y    +    + L+D+  + G  +    +   M  K D 
Sbjct: 336  ACASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDV 394

Query: 1046 KVWNALLGACKIHGNIE 1096
             VWN ++ A   +G+ E
Sbjct: 395  VVWNTMISALAQNGHGE 411


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like
            [Cucumis sativus]
          Length = 611

 Score =  561 bits (1447), Expect = e-157
 Identities = 276/458 (60%), Positives = 350/458 (76%)
 Frame = +2

Query: 2    FDEMPERDVVSWNTMVIMFAKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEF 181
            FD M E+DVVSWNT+V+ +AK G F +A+  Y  FR+L++GFN FSFAGVLI CVKL+E 
Sbjct: 152  FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKE- 210

Query: 182  WLPLTKQVHGQVLVSGFLSNLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
             L L KQVHGQVLV+GFLSNLVLSSSIVDAYAK G M  A+ +FD+M VKD+ AWTT+VS
Sbjct: 211  -LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVS 269

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYAK GDM +A  LF ++PE NPVSW++LISGYAR  LG EAL  F+ MM  GI P+Q+T
Sbjct: 270  GYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYT 329

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIG 721
            F             KHGK +HG+LIRT F+ N IVVSSLIDMYSKCG L     VF ++G
Sbjct: 330  FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMG 389

Query: 722  DKLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNACSHSGLVEEGI 901
            +K DV++WNTMISALAQ+G GE+++++F+DM   G KPDR T +V+L+ACSHSGLV+EG+
Sbjct: 390  NKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGL 449

Query: 902  HLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDGKVWNALLGACKI 1081
              F+++T D+G+  DQEHY+CL+DLLGRAG F EL + L+ M  KPD +VW+ALLG C+I
Sbjct: 450  RFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRI 509

Query: 1082 HGNIELGSIAAEHLIDQEPQSSAAYVLLSNMYALTGKWESVEKVRHLMNERQVKKEQAIS 1261
            H NIELG   AE +I+ +PQSSAAYV L+++YA  GKWESVEKVR LM+E+ ++KE+ IS
Sbjct: 510  HNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGIS 569

Query: 1262 WVEVESKVHSFSVFDHLHPSKDEIYLALEQLTGQMDDE 1375
            W++V +K HSF   D LHP K+EIYL LEQL    +++
Sbjct: 570  WIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEED 607



 Score =  139 bits (351), Expect = 2e-30
 Identities = 94/377 (24%), Positives = 177/377 (46%), Gaps = 31/377 (8%)
 Frame = +2

Query: 59   AKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEFWLPLTKQVHGQVLVSGFLS 238
            +  G   +AL + ++  +  +      F  +L  C K + F     K VH  +  +GF  
Sbjct: 38   SSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYF--KGGKCVHLHLKHTGFKR 95

Query: 239  -NLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVSGYAKLGDMETARRLFDEI 415
               ++++ ++  Y + G   +A++VFD+M V+++ +W  M++GYAKLGD+  AR+LFD +
Sbjct: 96   PTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRM 155

Query: 416  PEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFTFXXXXXXXXXXXXXKHGK 595
             E + VSW +++  YA+ G   EA+ L+ D     +  + F+F             +  K
Sbjct: 156  MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAK 215

Query: 596  SIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDII------------------G 721
             +HG ++   F  N ++ SS++D Y+KCG +   R++FD +                  G
Sbjct: 216  QVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWG 275

Query: 722  D------------KLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLN 865
            D            + + + W+ +IS  A++ LG E++  F  M + G  P++ T    L 
Sbjct: 276  DMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLC 335

Query: 866  ACSHSGLVEEGIHLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDG 1045
            AC+    ++ G  +   + + Y    +    + L+D+  + G  +    +   M  K D 
Sbjct: 336  ACASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDV 394

Query: 1046 KVWNALLGACKIHGNIE 1096
             VWN ++ A   +G+ E
Sbjct: 395  VVWNTMISALAQNGHGE 411


>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
            [Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 597

 Score =  554 bits (1427), Expect = e-155
 Identities = 273/462 (59%), Positives = 344/462 (74%), Gaps = 2/462 (0%)
 Frame = +2

Query: 2    FDEMPERDVVSWNTMVIMFAKNGFFKDALLFYNQFRKLNIGFNEFSFAGVLIACVKLEEF 181
            FD MPERDVVSWNTMVI +A++G   +AL FY +FR+  I FNEFSFAG+L ACVK  + 
Sbjct: 136  FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ- 194

Query: 182  WLPLTKQVHGQVLVSGFLSNLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVS 361
             L L +Q HGQVLV+GFLSN+VLS SI+DAYAK G M  A+R FD+M VKD+  WTT++S
Sbjct: 195  -LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253

Query: 362  GYAKLGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFT 541
            GYAKLGDME A +LF E+PE NPVSWT+LI+GY R G G  AL LF  M+  G+KP+QFT
Sbjct: 254  GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313

Query: 542  FXXXXXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIG 721
            F             +HGK IHG++IRT  +PNAIV+SSLIDMYSK GSL     VF I  
Sbjct: 314  FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373

Query: 722  DKLDVILWNTMISALAQHGLGEESIKLFHDMTRVGTKPDRTTLVVVLNACSHSGLVEEGI 901
            DK D + WNTMISALAQHGLG +++++  DM +   +P+RTTLVV+LNACSHSGLVEEG+
Sbjct: 374  DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433

Query: 902  HLFESITQDYGIAADQEHYACLVDLLGRAGKFKELKDLLKKMPYKPDGKVWNALLGACKI 1081
              FES+T  +GI  DQEHYACL+DLLGRAG FKEL   +++MP++PD  +WNA+LG C+I
Sbjct: 434  RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493

Query: 1082 HGNIELGSIAAEHLIDQEPQSSAAYVLLSNMYALTGKWESVEKVRHLMNERQVKKEQAIS 1261
            HGN ELG  AA+ LI  +P+SSA Y+LLS++YA  GKWE VEK+R +M +R+V KE+A+S
Sbjct: 494  HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553

Query: 1262 WVEVESKVHSFSVFD--HLHPSKDEIYLALEQLTGQMDDETS 1381
            W+E+E KV +F+V D  H H  K+EIY  L  L   +++E S
Sbjct: 554  WIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEAS 595



 Score =  138 bits (347), Expect = 6e-30
 Identities = 99/363 (27%), Positives = 166/363 (45%), Gaps = 39/363 (10%)
 Frame = +2

Query: 197  KQVHGQVLVSGFLS-NLVLSSSIVDAYAKSGVMGDAQRVFDQMRVKDVLAWTTMVSGYAK 373
            K +H  + ++GF   N +LS+ ++  Y K G   DA +VFDQM ++++ +W  MVSGY K
Sbjct: 66   KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125

Query: 374  LGDMETARRLFDEIPEPNPVSWTSLISGYARTGLGFEALKLFSDMMTRGIKPDQFTFXXX 553
             G +  AR +FD +PE + VSW +++ GYA+ G   EAL  + +    GIK ++F+F   
Sbjct: 126  SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185

Query: 554  XXXXXXXXXXKHGKSIHGHLIRTLFKPNAIVVSSLIDMYSKCGSLGVGRSVFDIIGDKLD 733
                      +  +  HG ++   F  N ++  S+ID Y+KCG +   +  FD +  K D
Sbjct: 186  LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-D 244

Query: 734  VILWNTMISALA-------------------------------QHGLGEESIKLFHDMTR 820
            + +W T+IS  A                               + G G  ++ LF  M  
Sbjct: 245  IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304

Query: 821  VGTKPDRTTLVVVLNACSHSGLVEEG--IHLFESITQDYGIAADQEHYACLVDLLGRAGK 994
            +G KP++ T    L A +    +  G  IH +   T    +  +    + L+D+  ++G 
Sbjct: 305  LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT---NVRPNAIVISSLIDMYSKSGS 361

Query: 995  FKELKDLLKKMPYKPDGKVWNALLGACKIHGNIELGSIAAEHLIDQ-----EPQSSAAYV 1159
             +  + + +    K D   WN ++ A   HG   LG  A   L D      +P  +   V
Sbjct: 362  LEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVV 418

Query: 1160 LLS 1168
            +L+
Sbjct: 419  ILN 421