BLASTX nr result
ID: Aconitum21_contig00022948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00022948
(754 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 75 5e-15
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 68 2e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 69 1e-13
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 64 2e-13
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 64 3e-13
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 75.1 bits (183), Expect(2) = 5e-15
Identities = 39/155 (25%), Positives = 71/155 (45%)
Frame = -2
Query: 480 IWKIKAQRKIRNFIWKLLSNSLATKVNIYNKHLNLSDISPMCTTSLETIYPCFFECQHAK 301
+WKIK RK ++F W+ LS LAT ++++H+ + P C E+I F C ++
Sbjct: 926 VWKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSR 985
Query: 300 ATWFASFLQLDTNSIPHCSPLDIWNFILDKYQDSQEFSFILSFISYLLWSI*NARNKLTF 121
W S + P S ++F+L + ++ I+ ++LW I +RN+ F
Sbjct: 986 QIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIF 1045
Query: 120 ESTVIPPIKTLESALHSTKEYRNLWDPNFITDSNP 16
E+ + P L+ A+ ++ T+ P
Sbjct: 1046 ENVIESPQVILDFAIQEANVWKQANSKEVATEYPP 1080
Score = 32.0 bits (71), Expect(2) = 5e-15
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 706 KWNIPKLHEHFLLDGVNVILELSINSNNRPDQLIWHYYNSGYYTVKLGY 560
+W + +L E + +IL + + + D W + SG YTVK GY
Sbjct: 851 QWKLGRLQELVDPSDIPLILGIRPSRTYKSDDFSWSFTKSGNYTVKSGY 899
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 68.2 bits (165), Expect(2) = 2e-14
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 7/165 (4%)
Frame = -2
Query: 480 IWKIKAQRKIRNFIWKLLSNSLATKVNIYNKHLNLSDISPMCTTSLETIYPCFFECQHAK 301
IW + K+++F+W+ LS +LAT + + + + I P C E+I F C A
Sbjct: 1202 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFAT 1261
Query: 300 ATWFASFLQLDTNSIPHCSPLDIWNFILDKYQDSQEFSFILSFISYLLWSI*NARNKLTF 121
W+ S L N + + + IL+ QD+ F +L+W I ARN + F
Sbjct: 1262 MAWWLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF 1321
Query: 120 ESTVIPPIKTLESA-------LHSTKEYRNLWDPNFITDSNPISW 7
P KT+ SA L++T+ ++ P N I W
Sbjct: 1322 NKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEW 1366
Score = 37.0 bits (84), Expect(2) = 2e-14
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 703 WNIPKLHEHFLLDGVNVILELSINSNNRPDQLIWHYYNSGYYTVKLGYNLVT 548
W+ K+ + I + + + +PD++IW+Y +G YTV+ GY L+T
Sbjct: 1128 WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLT 1179
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 68.9 bits (167), Expect(2) = 1e-13
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Frame = -2
Query: 489 WKSIWKIKAQRKIRNFIWKLLSNSLATKVNIYNKHLNLSDISPMCTTSLETIYPCFFECQ 310
W+ IWK K K++ F WK + N LA N+ + +N+ P C ET + C
Sbjct: 1051 WQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCD 1110
Query: 309 HAKATWFASFLQLDTNSIPHCSPLDIW-NFILDKYQDSQEFSFILSFISYLLWSI*NARN 133
+ W+ S L++ T +I IW +LD ++D++ ++ + W+I RN
Sbjct: 1111 ESSRAWYISPLRIHTGNI-EAGSFRIWVESLLDTHKDTEWWALFW----MICWNIWLGRN 1165
Query: 132 KLTFESTVIPPIKTLESALHSTKEY 58
K FE + + +E A+ E+
Sbjct: 1166 KWVFEKKKLAFQEVVERAVRGVMEF 1190
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 745 GPSKVSKFILPSLKWNIPKLHEHFLLDGVNVILELSINSNNRPDQLIWHYYNSGYYTVKL 566
GP KV + I +WN+ L+ F I + + +PDQ +W +G +TV+
Sbjct: 968 GPQKVCELISND-RWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRS 1026
Query: 565 GY 560
Y
Sbjct: 1027 AY 1028
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Frame = -2
Query: 480 IWKIKAQRKIRNFIWKLLSNSLATKVNIYNKHLNLSDISPMCTTSLETIYPCFFECQHAK 301
IW + K+++F+W+ LS +LAT + + + + P C E+I F C A
Sbjct: 1428 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 1487
Query: 300 ATWFASFLQLDTNSIPHCSPLDIWNFILDKYQDSQEFSFILSFISYLLWSI*NARNKLTF 121
W S L N + + + IL+ QD+ F +L+W I ARN + F
Sbjct: 1488 MAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF 1547
Query: 120 ESTVIPPIKTLESA-------LHSTKEYRNLWDPNFITDSNPISW 7
P KT+ SA L++T+ ++ P N I W
Sbjct: 1548 NKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEW 1592
Score = 37.0 bits (84), Expect(2) = 2e-13
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 703 WNIPKLHEHFLLDGVNVILELSINSNNRPDQLIWHYYNSGYYTVKLGYNLVT 548
W+ K+ + I + + + +PD++IW+Y +G YTV+ GY L+T
Sbjct: 1354 WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLT 1405
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 64.3 bits (155), Expect(2) = 3e-13
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Frame = -2
Query: 480 IWKIKAQRKIRNFIWKLLSNSLATKVNIYNKHLNLSDISPMCTTSLETIYPCFFECQHAK 301
IW + K+++F+W+ LS +LAT + + + + P C E+I F C A
Sbjct: 162 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 221
Query: 300 ATWFASFLQLDTNSIPHCSPLDIWNFILDKYQDSQEFSFILSFISYLLWSI*NARNKLTF 121
W S L N + + + IL+ QD+ F +L+W I ARN + F
Sbjct: 222 MAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF 281
Query: 120 ESTVIPPIKTLESA-------LHSTKEYRNLWDPNFITDSNPISW 7
P KT+ SA L++T+ ++ P N I W
Sbjct: 282 NKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEW 326
Score = 37.0 bits (84), Expect(2) = 3e-13
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 703 WNIPKLHEHFLLDGVNVILELSINSNNRPDQLIWHYYNSGYYTVKLGYNLVT 548
W+ K+ + I + + + +PD++IW+Y +G YTV+ GY L+T
Sbjct: 88 WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLT 139