BLASTX nr result

ID: Aconitum21_contig00022861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022861
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21507.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   144   6e-33
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   139   3e-31
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   133   2e-29
ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...   129   2e-28

>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  144 bits (364), Expect = 6e-33
 Identities = 80/156 (51%), Positives = 100/156 (64%)
 Frame = +3

Query: 60  SSSSTSGALIPNFPDDLSIQILARVPYAHHSSLSLVCKSWRSTLHSPFYFTTRSQLNCTQ 239
           SSSS+S  LIPN PDD+++Q +ARVP + H  L LVCKSWRS L+SP +F+TRS LNC Q
Sbjct: 14  SSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQ 73

Query: 240 TFLYINFRIHGSSFKWVRLXXXXXXXXXXXXXXXXXXVGSAFAVLGSKIYVIGGSINEVP 419
             LY+  R++  + KW  L                  +GSAFA +GSKI+V+GGS+N+V 
Sbjct: 74  HSLYLIVRVN-CTLKWFVL-NQNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131

Query: 420 CRDVWVFDSTVRRWGEGVKMRVGREFAAAGVVNGKI 527
              V VFD     W  G +MRVGREFAAAGVV  KI
Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVVGRKI 167


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  144 bits (364), Expect = 6e-33
 Identities = 80/156 (51%), Positives = 100/156 (64%)
 Frame = +3

Query: 60  SSSSTSGALIPNFPDDLSIQILARVPYAHHSSLSLVCKSWRSTLHSPFYFTTRSQLNCTQ 239
           SSSS+S  LIPN PDD+++Q +ARVP + H  L LVCKSWRS L+SP +F+TRS LNC Q
Sbjct: 14  SSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQ 73

Query: 240 TFLYINFRIHGSSFKWVRLXXXXXXXXXXXXXXXXXXVGSAFAVLGSKIYVIGGSINEVP 419
             LY+  R++  + KW  L                  +GSAFA +GSKI+V+GGS+N+V 
Sbjct: 74  HSLYLIVRVN-CTLKWFVL-NQNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVA 131

Query: 420 CRDVWVFDSTVRRWGEGVKMRVGREFAAAGVVNGKI 527
              V VFD     W  G +MRVGREFAAAGVV  KI
Sbjct: 132 SPTVQVFDCRFGTWELGPRMRVGREFAAAGVVGRKI 167


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score =  139 bits (349), Expect = 3e-31
 Identities = 75/155 (48%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
 Frame = +3

Query: 66  SSTSGALIPNFPDDLSIQILARVPYAHHSSLSLVCKSWRSTLHSPFYFTTRSQLNCTQTF 245
           S +   LIP  P+D+++  LAR+P +HH +LSLV K  RS L+SP  FTTRS L CTQ  
Sbjct: 11  SESPNNLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPL 70

Query: 246 LYINFRIHGSSFKWVRL-XXXXXXXXXXXXXXXXXXVGSAFAVLGSKIYVIGGSINEVPC 422
           LY+  R   SS +W  L                   VGSA+AVLG  IYV+GGSI +VP 
Sbjct: 71  LYLTLRSRDSSLQWFTLHRTNPNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIQDVPS 130

Query: 423 RDVWVFDSTVRRWGEGVKMRVGREFAAAGVVNGKI 527
             VW+ D    RW  G  MRV REFAAAGV++GKI
Sbjct: 131 SHVWLLDCRFHRWLRGPPMRVAREFAAAGVLHGKI 165


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score =  133 bits (334), Expect = 2e-29
 Identities = 73/161 (45%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
 Frame = +3

Query: 54  EGSSSSTSGALIPNFPDDLSIQILARVPYAHHSSLSLVCKSWRSTLHSPFYFTTRSQLNC 233
           E   S++   LIP+ PDD+++  L R+P + H +LSLV K  R+ L SP  FTTR+ L C
Sbjct: 8   ESEESASPNNLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILFTTRTLLQC 67

Query: 234 TQTFLYINFRIHGSS---FKWVRLXXXXXXXXXXXXXXXXXXVGSAFAVLGSKIYVIGGS 404
           TQ  LY+  R   SS   F  +                    VGSA+AVLG  IYV+GGS
Sbjct: 68  TQPLLYLTLRSRHSSLLQFFTLHRTNPNNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGS 127

Query: 405 INEVPCRDVWVFDSTVRRWGEGVKMRVGREFAAAGVVNGKI 527
           I++VP  +VW+ D    RW  G  MRVGREFAAAGV++GKI
Sbjct: 128 IHDVPSPNVWLLDCRFNRWLRGPSMRVGREFAAAGVLHGKI 168


>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
           gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
           SKIP6 [Medicago truncatula]
          Length = 356

 Score =  129 bits (325), Expect = 2e-28
 Identities = 68/148 (45%), Positives = 91/148 (61%)
 Frame = +3

Query: 84  LIPNFPDDLSIQILARVPYAHHSSLSLVCKSWRSTLHSPFYFTTRSQLNCTQTFLYINFR 263
           LIP+ PDD++I  LARVP +HH++L+LV K   S L S  +FT RS +  TQ  LY++ R
Sbjct: 9   LIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHILYLSLR 68

Query: 264 IHGSSFKWVRLXXXXXXXXXXXXXXXXXXVGSAFAVLGSKIYVIGGSINEVPCRDVWVFD 443
              +S ++  L                  +GSA+AV+  KIY+IGGS+N+VP R VW+ D
Sbjct: 69  TRSTSLQFFTLHNNHRLLPLPPLPSPT--IGSAYAVIHHKIYLIGGSVNDVPSRHVWILD 126

Query: 444 STVRRWGEGVKMRVGREFAAAGVVNGKI 527
               RW  G  MRV REFAAAGV++GKI
Sbjct: 127 CRFHRWLPGPSMRVAREFAAAGVIDGKI 154


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