BLASTX nr result

ID: Aconitum21_contig00022788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022788
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   325   3e-87
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   316   2e-84
ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   311   6e-83
ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group] g...   305   2e-81
gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japo...   305   2e-81

>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
           gi|297736046|emb|CBI24084.3| unnamed protein product
           [Vitis vinifera]
          Length = 769

 Score =  325 bits (833), Expect = 3e-87
 Identities = 159/183 (86%), Positives = 170/183 (92%)
 Frame = -1

Query: 551 IQSAKKIYEGLLSNVVNVTALVHIQFLRFLRRTEGVEPARKYFLDTRKSPNCTYHVYVAY 372
           IQ AKKIYE LL + VN TALVHIQF+RFLRRTEGVE ARKYFLD RKSPNCTYHV+VAY
Sbjct: 335 IQPAKKIYESLLGDGVNATALVHIQFIRFLRRTEGVEAARKYFLDARKSPNCTYHVFVAY 394

Query: 371 AMMSFCLDKDSKVAQNVFEAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALNTLP 192
           AMM+FCLDKD KVA NVFEAGLKRFMHEPGYILEYADFL RLNDDRNIRALFERAL++LP
Sbjct: 395 AMMAFCLDKDPKVAHNVFEAGLKRFMHEPGYILEYADFLSRLNDDRNIRALFERALSSLP 454

Query: 191 PEESVEVWNRFTQFEQTYGDLTSMLKVEQRRKEALSRTGEEGSSALEASLHDVVSRYSFM 12
           P+ESVEVW RFTQFEQTYGDL SMLKVEQRRKEALSRTGE+G++ALE+SL DVVSRYSFM
Sbjct: 455 PDESVEVWKRFTQFEQTYGDLASMLKVEQRRKEALSRTGEDGTTALESSLQDVVSRYSFM 514

Query: 11  DLW 3
           DLW
Sbjct: 515 DLW 517


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
           gi|223541464|gb|EEF43014.1| plant RNA cleavage
           stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  316 bits (809), Expect = 2e-84
 Identities = 155/183 (84%), Positives = 165/183 (90%)
 Frame = -1

Query: 551 IQSAKKIYEGLLSNVVNVTALVHIQFLRFLRRTEGVEPARKYFLDTRKSPNCTYHVYVAY 372
           IQ AKKIYE LL + VN TAL HIQF+RFLRR EGVE ARKYFLD RKSPNCTYHVYVAY
Sbjct: 336 IQPAKKIYETLLGDGVNATALAHIQFIRFLRRNEGVEAARKYFLDARKSPNCTYHVYVAY 395

Query: 371 AMMSFCLDKDSKVAQNVFEAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALNTLP 192
           A+M+FCLDKD K+A NVFEAGLKRFMHEP YILEYADFL RLNDD+NIRALFERAL++LP
Sbjct: 396 ALMAFCLDKDPKMAHNVFEAGLKRFMHEPVYILEYADFLSRLNDDKNIRALFERALSSLP 455

Query: 191 PEESVEVWNRFTQFEQTYGDLTSMLKVEQRRKEALSRTGEEGSSALEASLHDVVSRYSFM 12
           PEESVEVW RFTQFEQTYGDL SMLKVEQRRKEALSRTGE+G+SALE SL DV SRYSFM
Sbjct: 456 PEESVEVWKRFTQFEQTYGDLASMLKVEQRRKEALSRTGEDGASALEGSLQDVASRYSFM 515

Query: 11  DLW 3
           DLW
Sbjct: 516 DLW 518


>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
           predicted protein [Populus trichocarpa]
          Length = 769

 Score =  311 bits (796), Expect = 6e-83
 Identities = 150/183 (81%), Positives = 167/183 (91%)
 Frame = -1

Query: 551 IQSAKKIYEGLLSNVVNVTALVHIQFLRFLRRTEGVEPARKYFLDTRKSPNCTYHVYVAY 372
           IQ A+KIYE LL + VN TAL HIQF+RFLRR EGVE ARKYFLD RKSP+C+YHVYVAY
Sbjct: 338 IQPARKIYESLLGDGVNATALAHIQFIRFLRRNEGVEAARKYFLDARKSPDCSYHVYVAY 397

Query: 371 AMMSFCLDKDSKVAQNVFEAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALNTLP 192
           A+++FCLDKDSK+A N+FEAGLKRFMHEP YILEYADFL RLND+RNIRALFERAL++LP
Sbjct: 398 ALIAFCLDKDSKIAHNIFEAGLKRFMHEPVYILEYADFLSRLNDERNIRALFERALSSLP 457

Query: 191 PEESVEVWNRFTQFEQTYGDLTSMLKVEQRRKEALSRTGEEGSSALEASLHDVVSRYSFM 12
           PEESVEVW R+ QFEQTYGDL SMLKVEQRRKEALSRTGE+G+SALE+SL DVVSRYSFM
Sbjct: 458 PEESVEVWKRYIQFEQTYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFM 517

Query: 11  DLW 3
           DLW
Sbjct: 518 DLW 520


>ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group]
           gi|77556873|gb|ABA99669.1| Suppressor of forked protein
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113649595|dbj|BAF30107.1| Os12g0571900 [Oryza
           sativa Japonica Group] gi|215736851|dbj|BAG95780.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score =  305 bits (782), Expect = 2e-81
 Identities = 146/183 (79%), Positives = 163/183 (89%)
 Frame = -1

Query: 551 IQSAKKIYEGLLSNVVNVTALVHIQFLRFLRRTEGVEPARKYFLDTRKSPNCTYHVYVAY 372
           IQ AK IYE L++    +T+L HIQF+RFLRRTEG+E ARKYFLD RK P CTYHVYVAY
Sbjct: 315 IQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGCTYHVYVAY 374

Query: 371 AMMSFCLDKDSKVAQNVFEAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALNTLP 192
           A M+FCLDKD+KVAQ+VFEAGLKRFMHEPGYILEYADFLCRLNDDRN+RALFERAL+ LP
Sbjct: 375 ATMAFCLDKDAKVAQSVFEAGLKRFMHEPGYILEYADFLCRLNDDRNVRALFERALSLLP 434

Query: 191 PEESVEVWNRFTQFEQTYGDLTSMLKVEQRRKEALSRTGEEGSSALEASLHDVVSRYSFM 12
           PEES+EVW RF QFEQTYGDL+SMLKVEQRRKEALSRT E+  SALE +L+DVVSRYS+M
Sbjct: 435 PEESIEVWKRFAQFEQTYGDLSSMLKVEQRRKEALSRTSEDALSALENTLYDVVSRYSYM 494

Query: 11  DLW 3
           DLW
Sbjct: 495 DLW 497


>gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japonica Group]
          Length = 687

 Score =  305 bits (782), Expect = 2e-81
 Identities = 146/183 (79%), Positives = 163/183 (89%)
 Frame = -1

Query: 551 IQSAKKIYEGLLSNVVNVTALVHIQFLRFLRRTEGVEPARKYFLDTRKSPNCTYHVYVAY 372
           IQ AK IYE L++    +T+L HIQF+RFLRRTEG+E ARKYFLD RK P CTYHVYVAY
Sbjct: 311 IQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGCTYHVYVAY 370

Query: 371 AMMSFCLDKDSKVAQNVFEAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALNTLP 192
           A M+FCLDKD+KVAQ+VFEAGLKRFMHEPGYILEYADFLCRLNDDRN+RALFERAL+ LP
Sbjct: 371 ATMAFCLDKDAKVAQSVFEAGLKRFMHEPGYILEYADFLCRLNDDRNVRALFERALSLLP 430

Query: 191 PEESVEVWNRFTQFEQTYGDLTSMLKVEQRRKEALSRTGEEGSSALEASLHDVVSRYSFM 12
           PEES+EVW RF QFEQTYGDL+SMLKVEQRRKEALSRT E+  SALE +L+DVVSRYS+M
Sbjct: 431 PEESIEVWKRFAQFEQTYGDLSSMLKVEQRRKEALSRTSEDALSALENTLYDVVSRYSYM 490

Query: 11  DLW 3
           DLW
Sbjct: 491 DLW 493


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