BLASTX nr result

ID: Aconitum21_contig00022724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022724
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    85   6e-15
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    71   9e-11
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 47/140 (33%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
 Frame = +1

Query: 13  MAWFLSNRRGPEWKQGTTAQAXXXXXXXXXXXXXXXXXXXXXXXXSKYFEYSSEIQKTEI 192
           M WF   RRGPEWKQG T Q                         S+Y +Y +++  + I
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 193 NFQXXXXXXXXXXXXXXRSMSFNWKFDFWRSRSRSVQDS--GHQGGSSPWGXXXXXXXXX 366
           NFQ               S S NW   F   + RS ++S    +G S PWG         
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLL 120

Query: 367 XXIAYQSSFHSQWFRPLWKS 426
             ++YQSSFHS+WF PLW+S
Sbjct: 121 VLLSYQSSFHSKWFGPLWRS 140


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 41/139 (29%), Positives = 54/139 (38%)
 Frame = +1

Query: 13  MAWFLSNRRGPEWKQGTTAQAXXXXXXXXXXXXXXXXXXXXXXXXSKYFEYSSEIQKTEI 192
           M WF   RRGPEWKQG T Q                         S Y  Y ++++ + +
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 193 NFQXXXXXXXXXXXXXXRSMSFNWKFDFWRSRSRSVQDSGHQGGSSPWGXXXXXXXXXXX 372
           N Q               S S NW   ++R R      +     S PWG           
Sbjct: 61  NLQIFLFLLPILLILFMASYSTNWLL-YYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLML 119

Query: 373 IAYQSSFHSQWFRPLWKSY 429
           ++YQSSFHS+WF PL  S+
Sbjct: 120 LSYQSSFHSKWFGPLRGSH 138


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 39/132 (29%), Positives = 50/132 (37%)
 Frame = +1

Query: 13  MAWFLSNRRGPEWKQGTTAQAXXXXXXXXXXXXXXXXXXXXXXXXSKYFEYSSEIQKTEI 192
           M WF   RRGPEWKQG T Q                         S Y  Y +++  + I
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 193 NFQXXXXXXXXXXXXXXRSMSFNWKFDFWRSRSRSVQDSGHQGGSSPWGXXXXXXXXXXX 372
           N Q               S S NW   ++R RS          GS PWG           
Sbjct: 61  NLQIFLVLLPILLILFMASYSTNWLL-YYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLML 119

Query: 373 IAYQSSFHSQWF 408
           ++Y+S+FHS+WF
Sbjct: 120 LSYRSTFHSKWF 131


Top