BLASTX nr result

ID: Aconitum21_contig00022709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022709
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   172   3e-41
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   156   2e-36

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/141 (65%), Positives = 118/141 (83%)
 Frame = +2

Query: 2   MEVVSHLMNAYGKVGHFDEVVTIMHQVISRNSNLTSEAYSAAISCFGKAGQLEIMETMLK 181
           +++VS L++AYGK+GHF EV  I+HQV SR+ N   E YS AISCFGK GQLE+ME  LK
Sbjct: 125 IQIVSKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALK 184

Query: 182 EMVSSGVPLDSSTGNAFLTYYSKYGSLSQMEYAYGRLKRSRILIQEQGIRAMASAYIHQK 361
           EMVS G P+DS+TGNAF+ YYS +GSL++ME AY RLK+SRILI+E+GIRAM+ AYI +K
Sbjct: 185 EMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEK 244

Query: 362 QFYKLGEFVRDLGLGRKNAGN 424
           ++Y+LG+F+RD+GLGRKN GN
Sbjct: 245 KYYRLGQFLRDVGLGRKNVGN 265


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  183 bits (464), Expect = 1e-44
 Identities = 88/141 (62%), Positives = 115/141 (81%)
 Frame = +2

Query: 2   MEVVSHLMNAYGKVGHFDEVVTIMHQVISRNSNLTSEAYSAAISCFGKAGQLEIMETMLK 181
           ++V+S L NAYGK+GHFD +  ++ QV  R S+L  EAYS AISCFGK  QLE+ME+ L+
Sbjct: 90  VQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLR 149

Query: 182 EMVSSGVPLDSSTGNAFLTYYSKYGSLSQMEYAYGRLKRSRILIQEQGIRAMASAYIHQK 361
           EMVSSG  ++S+TGN+F+ YYS +GSL +ME AYGRLKRSR LI+++GI AMA AYI ++
Sbjct: 150 EMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKR 209

Query: 362 QFYKLGEFVRDLGLGRKNAGN 424
           +FY+LGEF+RD+GLGRKN GN
Sbjct: 210 KFYRLGEFLRDVGLGRKNVGN 230


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/141 (57%), Positives = 111/141 (78%)
 Frame = +2

Query: 2   MEVVSHLMNAYGKVGHFDEVVTIMHQVISRNSNLTSEAYSAAISCFGKAGQLEIMETMLK 181
           +++VS L++AY K GHF+EV+ I+ Q+   N +L  EAYS AISCFGK GQL++ME  LK
Sbjct: 129 IQIVSRLIDAYSKKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLMENALK 188

Query: 182 EMVSSGVPLDSSTGNAFLTYYSKYGSLSQMEYAYGRLKRSRILIQEQGIRAMASAYIHQK 361
           +MV  G P+D +TGNAF+ YYS +GSL+ ME AY RLKRSR L+  +GIRA++ AY+ ++
Sbjct: 189 DMVLRGFPVDYATGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVKER 248

Query: 362 QFYKLGEFVRDLGLGRKNAGN 424
           +FY+LGEF+RD+GLGRK+ GN
Sbjct: 249 KFYRLGEFLRDVGLGRKDVGN 269


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/142 (58%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   MEVVSHLMNAYGKVGHFDEVVTIMHQVIS-RNSNLTSEAYSAAISCFGKAGQLEIMETML 178
           ++V+S L++ Y K G FDEV+ I+ Q+ S R  +   + YS AISCFGK GQLE+ME  L
Sbjct: 129 VQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELMEDTL 188

Query: 179 KEMVSSGVPLDSSTGNAFLTYYSKYGSLSQMEYAYGRLKRSRILIQEQGIRAMASAYIHQ 358
           K+MVS G  +DS+TGNAF+ YYS +GSL++ME AY RLKRSR+LI+ +GIRAM+ AYI +
Sbjct: 189 KKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFAYIKE 248

Query: 359 KQFYKLGEFVRDLGLGRKNAGN 424
           ++FY L EF+RD+GLGRKN GN
Sbjct: 249 RKFYGLSEFLRDVGLGRKNLGN 270


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/141 (55%), Positives = 103/141 (73%)
 Frame = +2

Query: 2   MEVVSHLMNAYGKVGHFDEVVTIMHQVISRNSNLTSEAYSAAISCFGKAGQLEIMETMLK 181
           +++VS L++AYGK+GHF EV  I+HQ                       GQLE+ME  LK
Sbjct: 170 IQIVSKLIDAYGKMGHFGEVTRILHQ----------------------GGQLEMMENALK 207

Query: 182 EMVSSGVPLDSSTGNAFLTYYSKYGSLSQMEYAYGRLKRSRILIQEQGIRAMASAYIHQK 361
           EMVS G P+DS+TGNAF+ YYS +GSL++ME AY RLK+SRILI+E+GIRAM+ AYI +K
Sbjct: 208 EMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEK 267

Query: 362 QFYKLGEFVRDLGLGRKNAGN 424
           ++Y+LG+F+RD+GLGRKN GN
Sbjct: 268 KYYRLGQFLRDVGLGRKNVGN 288


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