BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022698
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   258   4e-67
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   228   5e-58
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-54
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar...   212   3e-53

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  258 bits (659), Expect = 4e-67
 Identities = 120/173 (69%), Positives = 148/173 (85%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           AGLID A++ FDEM +SNCRVFS+DYNRFIGVL+R SRFDLA++YY  MIP GFSL SFT
Sbjct: 22  AGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFT 81

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           YSRFISGLCKV+N VLI  LLEDMD+LG VPDIWAYNIYLN+L  E+QL++AL +++TM+
Sbjct: 82  YSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMV 141

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
            KGR+PD+VTYT +I+GLC++GR D+AVE+W  MV +G++PD  AC ALV GL
Sbjct: 142 EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/164 (26%), Positives = 80/164 (48%)
 Frame = -1

Query: 503 AIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFIS 324
           A ++F+EM         V +   I   +R+   ++AK+   +M  LG       Y+  + 
Sbjct: 343 AYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVD 402

Query: 323 GLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDP 144
            LCK   + + +++  DM + G+ PD+ +YN  +N L +  ++  A+ +   M   G  P
Sbjct: 403 HLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCP 462

Query: 143 DVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALV 12
           D VT+  +I GL    +L  A  +W++M+ +G+  DG     LV
Sbjct: 463 DEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 50/173 (28%), Positives = 82/173 (47%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           A  +D A  +    +E+      V YN  I  L   S    A + + EM   G +    T
Sbjct: 302 ANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVT 361

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           ++  I    +  +  +   LL+ M  LG++PD   Y   ++ L K  ++ MA ++   M+
Sbjct: 362 FTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMV 421

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
             G  PDVV+Y  LI+GLC++ R+  A+ L+ +M   G  PD V    ++ GL
Sbjct: 422 ESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGL 474



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 45/169 (26%), Positives = 75/169 (44%)
 Frame = -1

Query: 518 GLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTY 339
           G +DLA ++    +    +     YN  I    +    D A+     M   G      TY
Sbjct: 198 GKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTY 257

Query: 338 SRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIR 159
           +  ++  C    L     L++ M++ GV PD+++YN  L  L K ++L+ A  ++   + 
Sbjct: 258 NVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKME 317

Query: 158 KGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALV 12
                DVV+Y T+I  LC +     A +L+ EM  +G  PD V    L+
Sbjct: 318 AKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILI 366



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 47/170 (27%), Positives = 72/170 (42%)
 Frame = -1

Query: 512 IDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSR 333
           +D+A+ +   M+E       V Y   I  L R  RFD A   +  M+  GFS        
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 332 FISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKG 153
            + GLC    + L   L     +  +      YN  +N   +   ++ A +I+  M R G
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 152 RDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
            +PD+VTY  L++  C    L+ A  L  +M   G  PD  +   L+ GL
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGL 299


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  228 bits (580), Expect = 5e-58
 Identities = 102/173 (58%), Positives = 135/173 (78%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           AGLID A+Q+FDEM +SNCRVFS+DYNRFIGVLI  SRFDLA  YY +M   GFSL+SFT
Sbjct: 22  AGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFT 81

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           YSRFI+GLCKV+N   I+ LL DM+ L  +PDIWA+NIYL++L  E ++++AL +   ++
Sbjct: 82  YSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIV 141

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
           + GR PDVVTYT +IHG+CK  + D A++ W +M+ +G++PD  ACGA+V GL
Sbjct: 142 KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/166 (26%), Positives = 82/166 (49%)
 Frame = -1

Query: 503 AIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFIS 324
           A ++F+EM +       V +  FI   +    F++AK+   +M  +G S     Y+  I 
Sbjct: 344 AYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIID 403

Query: 323 GLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDP 144
            LCK   + + +++  DM + G+ PD+ ++N  +N   K  ++  A+ +   M  +G  P
Sbjct: 404 HLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYP 463

Query: 143 DVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFG 6
           D VTY  +I GL +  ++  A  +W +M+ +G+  D      L+ G
Sbjct: 464 DEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/150 (30%), Positives = 73/150 (48%)
 Frame = -1

Query: 452 VDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFISGLCKVRNLVLINTLLED 273
           V YN  I    +      A + + EM   G      T++ FI       +  +   LL+ 
Sbjct: 326 VSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQ 385

Query: 272 MDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDPDVVTYTTLIHGLCKSGR 93
           M ++G+ PD   Y   ++ L K  ++EMA +I   M+ +G  PDV+++  LI+G CK  R
Sbjct: 386 MTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSR 445

Query: 92  LDAAVELWNEMVARGYNPDGVACGALVFGL 3
           +  A+ L+ EM  RG  PD V    ++ GL
Sbjct: 446 VSEAMHLYEEMQNRGSYPDEVTYKLIIGGL 475



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
 Frame = -1

Query: 518 GLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTY 339
           G IDLA+++F++++++  +   V Y   I  + +  +FD A +++ +MI  GFS  +   
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187

Query: 338 SRFISGLCKVRNLVLINTLLEDMDKLGVVP-DIWAYNIYLNVLLKEDQLEMALAILRTMI 162
              + GLC  R + L   L+ D+ K G V      YN  ++   +  +++ A AI   M 
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
           R G +PD+VTY   ++  C    LD A +L   M   G  PD  +   L+ G+
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGI 300



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 35/207 (16%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           AG ID A  I   M  + C    V YN F+     +   D AK+    M   G     ++
Sbjct: 233 AGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYS 292

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           Y++ + G+CK         L+ +      + D+ +YN  +    K      A  +   M 
Sbjct: 293 YNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMG 352

Query: 161 RKGRDPDVVT-----------------------------------YTTLIHGLCKSGRLD 87
           +KG  PDVVT                                   YTT+I  LCKSG+++
Sbjct: 353 QKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVE 412

Query: 86  AAVELWNEMVARGYNPDGVACGALVFG 6
            A  ++ +MV +G +PD ++  AL+ G
Sbjct: 413 MAHSIFCDMVEQGISPDVISFNALING 439



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
 Frame = -1

Query: 497 QIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFISGL 318
           ++  +M   NC      +N ++ +L  + R DLA   + +++  G      TY+  I G+
Sbjct: 100 ELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGV 159

Query: 317 CKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGR-DPD 141
           CK++          DM   G  PD  A    +  L    ++++A  ++  +++ GR    
Sbjct: 160 CKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLS 219

Query: 140 VVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
            + Y  LI G C++GR+D A  + + M   G  PD
Sbjct: 220 TLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPD 254



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/136 (25%), Positives = 62/136 (45%)
 Frame = -1

Query: 518 GLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTY 339
           G  ++A ++ D+M E       + Y   I  L +  + ++A   + +M+  G S    ++
Sbjct: 374 GSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISF 433

Query: 338 SRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIR 159
           +  I+G CK   +     L E+M   G  PD   Y + +  L++E ++ +A  +   M+ 
Sbjct: 434 NALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMD 493

Query: 158 KGRDPDVVTYTTLIHG 111
           KG   D     TLI G
Sbjct: 494 KGFTLDRAIAQTLIRG 509


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  222 bits (565), Expect = 3e-56
 Identities = 105/173 (60%), Positives = 131/173 (75%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           AGLID A+++FDEM  S CRVF +DYNRFIGVLIR SRFDLA  YY +M PLGFSL+SFT
Sbjct: 22  AGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFT 81

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           YSRFISGLC+ +    I+ LL+DM+KL  VPDIWA+NIYLN+L +E++ E AL +   M+
Sbjct: 82  YSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMV 141

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
            +GR+PDVVT+T +I GLCK  + DAAV+ W  M+ +G  PD  AC AL  GL
Sbjct: 142 ERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGL 194



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
 Frame = -1

Query: 515 LIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYF---EMIPLGFSLTSF 345
           + + A+++  +M  S        YN+ +    + +  D  K Y F   +M+P GF     
Sbjct: 270 MFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPD--KAYLFMVTKMVPKGFC-DVV 326

Query: 344 TYSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTM 165
           +Y+  I   C + N      L E+M + G+ PD+  + I +   L+E   +MA  +L  M
Sbjct: 327 SYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLM 386

Query: 164 IRKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFG 6
              G  PD + YTT+I   CKSG+++ A  ++ +MV +G  PD V+  AL+ G
Sbjct: 387 AGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALING 439



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/156 (26%), Positives = 75/156 (48%)
 Frame = -1

Query: 503 AIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFIS 324
           A ++F+EM         V +   I   +R+   D+AK+    M  +G       Y+  I 
Sbjct: 344 AYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIID 403

Query: 323 GLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDP 144
             CK   + + +++  DM + G+ PD+ +YN  +N   K  ++   + +   M+++G  P
Sbjct: 404 HHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFP 463

Query: 143 DVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
           D VTY  +I  L +  +L  A  +W++M+ RG   D
Sbjct: 464 DEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLD 499



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
 Frame = -1

Query: 452 VDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFISGLCKVRNLVLINTLLED 273
           V YN  I      S    A + + EM   G +    T++  I    +  N  +   LL+ 
Sbjct: 326 VSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDL 385

Query: 272 MDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDPDVVTYTTLIHGLCKSGR 93
           M  +G++PD   Y   ++   K  ++EMA +I   M+ KG  PDVV+Y  LI+G CKS R
Sbjct: 386 MAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLR 445

Query: 92  LDAAVELWNEMVARGYNPDGVA----CGALV 12
           +   + L+ +M+ RG  PD V      GALV
Sbjct: 446 VGEVMHLYEQMLQRGSFPDEVTYKLIIGALV 476



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
 Frame = -1

Query: 509 DLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFS-LTSFTYSR 333
           D A+Q +  M++   R  +         L    + DLA      +I  G S +++  Y+ 
Sbjct: 166 DAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNA 225

Query: 332 FISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKG 153
            ISG C+   +     ++  M + G  PD+  YN+ LN    E   E A+ +L+ M    
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285

Query: 152 RDPDVVTYTTLIHGLCKSGRLDAA-VELWNEMVARGY 45
            +PDV +Y  L+   CK+   D A + +  +MV +G+
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF 322



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
 Frame = -1

Query: 503 AIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFIS 324
           A+++F  M+E       V +   I  L +  +FD A +++  M+  G    +        
Sbjct: 133 ALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAV 192

Query: 323 GLCKVRNLVLINTLLEDMDKLGVVP-DIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRD 147
           GLC    + L   L+  +   G+       YN  ++   +  +++ ALA++  M R G  
Sbjct: 193 GLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCK 252

Query: 146 PDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
           PD+VTY  L++  C     + AV+L  +M      PD
Sbjct: 253 PDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPD 289


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  216 bits (549), Expect = 2e-54
 Identities = 108/172 (62%), Positives = 130/172 (75%)
 Frame = -1

Query: 518 GLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTY 339
           GLID AI+IFDEM +S+C V S DYNRFIGVLI  SRFDLA+ YY  MIP GFSLT FTY
Sbjct: 23  GLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTY 82

Query: 338 SRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIR 159
           SRFIS LC+++N  LI  LLEDM +LG +PDIWA+NIYLN+L +E+ LE+AL     M+ 
Sbjct: 83  SRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVA 142

Query: 158 KGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
           KGR+PDVVTYT ++  LCK+ + D AVE W  MV +G +PD  AC ALV GL
Sbjct: 143 KGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGL 194



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/173 (30%), Positives = 84/173 (48%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           A  +D A ++ + M E      +V YN  IG L +      A R + EM     +    T
Sbjct: 302 ANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGT 360

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           ++  I       +  +   LL+ M +  ++PD+  Y   ++   K  ++EMA  + R MI
Sbjct: 361 FATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMI 420

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
             G  PDVV+Y  LI+GLCK+ ++  A+ L+ EM  RG  PD V    ++ GL
Sbjct: 421 EIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGL 473



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 36/192 (18%)
 Frame = -1

Query: 515 LIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYS 336
           L++LA++ FDEM+        V Y   +  L +  ++D A  ++  M+  G S      +
Sbjct: 129 LLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACT 188

Query: 335 RFISGLC--------------------KVRNLVLINTLLED----------------MDK 264
             + GLC                    K  NL+  N+L+                  M K
Sbjct: 189 ALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIF-NSLMSGFCKSGRISKALAIKSFMSK 247

Query: 263 LGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDPDVVTYTTLIHGLCKSGRLDA 84
            G  PD+  YNI LN       LE+A   ++ M R G +PDV +Y  L+ GLCK+ RLD 
Sbjct: 248 HGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDK 307

Query: 83  AVELWNEMVARG 48
           A +L N M  +G
Sbjct: 308 AYKLMNTMWEKG 319



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/102 (30%), Positives = 56/102 (54%)
 Frame = -1

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           Y+  +   CK R + +   +  DM ++G+ PD+ +YN  +N L K  ++  A+ +   M 
Sbjct: 396 YTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQ 455

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
            +G  PD VT+  +I GL +   L  A ++W++M+ +GY  D
Sbjct: 456 IRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLD 497



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/161 (27%), Positives = 76/161 (47%)
 Frame = -1

Query: 518 GLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTY 339
           G +DLA ++    ++   +  ++ +N  +    +  R   A      M   G      TY
Sbjct: 198 GKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257

Query: 338 SRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIR 159
           +  ++  C    L L    ++ M+++G+ PD+++YN  L  L K ++L+ A  ++ TM  
Sbjct: 258 NILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWE 317

Query: 158 KGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
           KG   D V+Y T+I  LCKS     A  L+ EM  +   PD
Sbjct: 318 KGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPD 357


>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
           gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
           thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  212 bits (539), Expect = 3e-53
 Identities = 98/173 (56%), Positives = 136/173 (78%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           +G+ID A+Q+FDEM  S+ RVFS DYNRFIGVL+R+SRF+LA+  Y++M P+GFSL  FT
Sbjct: 22  SGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFT 81

Query: 341 YSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMI 162
           YSRFISGLCKV+   LI+ LL DM+ LG +PDIWA+N+YL++L +E+++  A+     M+
Sbjct: 82  YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141

Query: 161 RKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGVACGALVFGL 3
           ++GR+PDVV+YT LI+GL ++G++  AVE+WN M+  G +PD  AC ALV GL
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/150 (30%), Positives = 72/150 (48%)
 Frame = -1

Query: 452 VDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFISGLCKVRNLVLINTLLED 273
           V Y+  I    R S    A R + EM   G  +   TY+  I    +  N  +   LL+ 
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385

Query: 272 MDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDPDVVTYTTLIHGLCKSGR 93
           M +LG+ PD   Y   L+ L K   ++ A  +   MI     PD ++Y +LI GLC+SGR
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445

Query: 92  LDAAVELWNEMVARGYNPDGVACGALVFGL 3
           +  A++L+ +M  +   PD +    ++ GL
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGL 475



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/156 (26%), Positives = 78/156 (50%)
 Frame = -1

Query: 503 AIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFTYSRFIS 324
           A ++F+EM +    +  V Y   I   +R+    +AK+   +M  LG S     Y+  + 
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403

Query: 323 GLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTMIRKGRDP 144
            LCK  N+     +  DM +  + PD  +YN  ++ L +  ++  A+ +   M  K   P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463

Query: 143 DVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPD 36
           D +T+  +I GL +  +L AA ++W++M+ +G+  D
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLG-FSLTSF 345
           AG +  A++I++ MI S     +      +  L    + DLA     E I      L++ 
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221

Query: 344 TYSRFISGLCKVRNLVLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTM 165
            Y+  ISG CK   +     L   M K+G  PD+  YN+ LN     + L+ A  ++  M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281

Query: 164 IRKGRDPDVVTYTTLIHGLCKSGRLDAAVE-LWNEMVARGY 45
           +R G   D  +Y  L+   C+    D     +  EM  RG+
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
 Frame = -1

Query: 521 AGLIDLAIQIFDEMIESNCRVFSVDYNRFIGVLIRDSRFDLAKRYYFEMIPLGFSLTSFT 342
           AG I+ A  +   M +  C    V YN  +     ++    A+    EM+  G  L +++
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292

Query: 341 YSRFISGLCKVRNL-VLINTLLEDMDKLGVVPDIWAYNIYLNVLLKEDQLEMALAILRTM 165
           Y++ +   C+V +     N ++++M+  G   D+ +Y+  +    +      A  +   M
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEM 351

Query: 164 IRKGRDPDVVTYTTLIHGLCKSGRLDAAVELWNEMVARGYNPDGV 30
            +KG   +VVTYT+LI    + G    A +L ++M   G +PD +
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396