BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022648
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2...   664   0.0  
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ...   606   e-171
ref|NP_001189950.1| uncharacterized protein [Arabidopsis thalian...   598   e-168

>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
            predicted protein [Populus trichocarpa]
          Length = 845

 Score =  664 bits (1713), Expect = 0.0
 Identities = 320/453 (70%), Positives = 378/453 (83%)
 Frame = -1

Query: 1411 ETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQES 1232
            E A RVF+ M NKT VSWN+++AGF+RN DMESA ++F  MPD DLVSWNTMIGALVQES
Sbjct: 393  EMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQES 452

Query: 1231 LFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDT 1052
            +F+EAIE FRVMQ+EG+  DKVTM+ VASACGYLGA DLAKW+H YIKK DIH DM L T
Sbjct: 453  MFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGT 512

Query: 1051 ALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMP 872
            ALVDM+ARCGDP+S+MQVF KM ++DVSAWTAAI AMAMEGNG  AI LFDEM++QG+ P
Sbjct: 513  ALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKP 572

Query: 871  DAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHEL 692
            D V FV +LTA SH GLVEQG  IFRSM+D YGI PQ VHYGCMVDLLGRAGLL+EA  L
Sbjct: 573  DGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSL 632

Query: 691  IESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATELSPDKTGIHILLSNLYASAGKW 512
            I SM MEPN ++WG+LLAACR H NV++AAYAA+  +EL P++TGIH+LLSN+YASAG+W
Sbjct: 633  INSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRW 692

Query: 511  TDVVRVRMDMKAKGVHKLPGSSSIEVNGTIHEFTSCDESHPLTTQIVRMLDEMECKLKDA 332
             DV +VR+ +K KG HK+PGSSSIE+NG I EFT+ DESHP  T I  ML E+ C+L+D 
Sbjct: 693  DDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDI 752

Query: 331  GHVPNLSNVLLDVDKHEKEHMLSRHSEKLAIAFGLISSDHGTKIHVVKNLRMCSDCHSFA 152
            G+VP+L+NVLLDV++ EKE++LSRHSEKLAIAF LIS+  G  I V KNLR+CSDCHSFA
Sbjct: 753  GYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFA 812

Query: 151  KLVSGAYNREIVVRDNNRFHFFKGGLCSCKDYW 53
            KLVS +Y+REI+VRDNNRFHFF+ G CSC DYW
Sbjct: 813  KLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  107 bits (266), Expect = 1e-20
 Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            N +V  +++   ++ A ++F+   DK+LV +NT++   V++ L  E +     M   G +
Sbjct: 279  NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARC--------- 1025
             D++TM++  SAC  L      KW H Y+ +N +     +  A+++MY +C         
Sbjct: 339  PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398

Query: 1024 ----------------------GDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAI 911
                                  GD ES+ ++F  M + D+ +W   I A+  E   ++AI
Sbjct: 399  FDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAI 458

Query: 910  SLFDEMIKQGVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYG----- 746
             LF  M  +G+  D V  VGV +AC + G ++  K I         I  + +H+      
Sbjct: 459  ELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGY------IKKKDIHFDMHLGT 512

Query: 745  CMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLAACRTHNN 617
             +VD+  R G    A ++   M ++ +   W A + A     N
Sbjct: 513  ALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 48/184 (26%), Positives = 98/184 (53%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            N+++  +    +++   R+F+ M ++++VSW ++IG   +   ++EA+  F  M   G++
Sbjct: 178  NSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIR 237

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQV 998
             + VTM+ V SAC  L    L + V   I + ++  +  +  ALVDMY +CG  + + ++
Sbjct: 238  PNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKI 297

Query: 997  FQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLV 818
            F +  +K++  +   +     +G   + +++  EM+K G  PD +  +  ++ACS    V
Sbjct: 298  FDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDV 357

Query: 817  EQGK 806
              GK
Sbjct: 358  SCGK 361



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 61/233 (26%), Positives = 118/233 (50%), Gaps = 5/233 (2%)
 Frame = -1

Query: 1321 MESASRLFEL-MPDKDLVSWNTMIGALVQE----SLFEEAIEQFRVMQNEGVKGDKVTMM 1157
            +E A +  EL + D  ++  + M  +L++      L  +AI  FR +   G   D  T  
Sbjct: 84   LEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFP 143

Query: 1156 AVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQVFQKMKEK 977
             V SAC    A      VH  I K     DM ++ +L+  Y  CG+ +   +VF KM E+
Sbjct: 144  FVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSER 203

Query: 976  DVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLVEQGKLIF 797
            +V +WT+ I   A  G  ++A+SLF EM++ G+ P++V  VGV++AC+    ++ G+ + 
Sbjct: 204  NVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVC 263

Query: 796  RSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLA 638
              +  +  +    +    +VD+  + G + +A ++ +   ++ N +++  +++
Sbjct: 264  TCI-GELELEVNALMVNALVDMYMKCGAIDKARKIFDEC-VDKNLVLYNTIMS 314


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
            [Vitis vinifera]
          Length = 836

 Score =  659 bits (1699), Expect = 0.0
 Identities = 317/454 (69%), Positives = 373/454 (82%)
 Frame = -1

Query: 1414 PETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQE 1235
            PE A RVF+ M NKT VSWN++ AGFIRN D+ESA  +F  +P+++ V WNTMI  LVQ+
Sbjct: 384  PEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQK 443

Query: 1234 SLFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLD 1055
            SLFE+AIE FR MQ EG+K D+VTMM +ASACGYLGAP+LAKWVH YI+KN I  DMRL+
Sbjct: 444  SLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLN 503

Query: 1054 TALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVM 875
            TALVDM+ARCGDP+S+MQVF KM E+DVSAWTAAI  MAMEGNGE A  LF++M+ QGV 
Sbjct: 504  TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 563

Query: 874  PDAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHE 695
            PD V FV VLTACSH G VEQG  IF S+ +D+GI PQI HYGCMVDLLGRAGLL EA +
Sbjct: 564  PDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFD 622

Query: 694  LIESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATELSPDKTGIHILLSNLYASAGK 515
            LI+SMPMEPN +VWG+LLAACR H NVE+A YAA+   EL+P + G+H+LLSN+YASAGK
Sbjct: 623  LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 682

Query: 514  WTDVVRVRMDMKAKGVHKLPGSSSIEVNGTIHEFTSCDESHPLTTQIVRMLDEMECKLKD 335
            WTDV RVR++++ KGV K+PGSSS++VNG IHEFTS DESHP  T I  ML EM C+  D
Sbjct: 683  WTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSD 742

Query: 334  AGHVPNLSNVLLDVDKHEKEHMLSRHSEKLAIAFGLISSDHGTKIHVVKNLRMCSDCHSF 155
            AGH+P+LSNVLLDVD+ EKE++LSRHSEKLAIAFGLI++     I VVKNLRMCSDCHSF
Sbjct: 743  AGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSF 802

Query: 154  AKLVSGAYNREIVVRDNNRFHFFKGGLCSCKDYW 53
            AK+ S  YNREI+VRDNNRFHFF+ GLCSC DYW
Sbjct: 803  AKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 69/306 (22%), Positives = 144/306 (47%), Gaps = 9/306 (2%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            N ++  +     M+   ++FE M ++++VSW ++I    +    +EA+  F  M   G++
Sbjct: 170  NCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIR 229

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQV 998
               VTM+ V SAC  L   D+ + V  YI +  +  +  +  ALVDMY +CG  +++ ++
Sbjct: 230  PSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRL 289

Query: 997  FQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSH---- 830
            F +  ++++  +   +   A +G   +A+++ DEM++QG  PD V  +  ++A +     
Sbjct: 290  FDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDL 349

Query: 829  -SGLVEQGKLIFRSMQ--DDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAI 659
              G V  G +I   ++  D  G          ++D+  + G    A  + + M      +
Sbjct: 350  FYGKVCHGYVIRNGLEGWDSIG--------NVIIDMYMKCGKPEMACRVFDLM-SNKTVV 400

Query: 658  VWGALLAACRTHNNVELAAYAAKNATELSPDKTGI--HILLSNLYASAGKWTDVVRVRMD 485
             W +L A    + +VE    +A       P++  +  + ++S L      + D + +  +
Sbjct: 401  SWNSLTAGFIRNGDVE----SAWEVFNQIPERNAVFWNTMISGL-VQKSLFEDAIELFRE 455

Query: 484  MKAKGV 467
            M+ +G+
Sbjct: 456  MQGEGI 461



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 5/233 (2%)
 Frame = -1

Query: 1321 MESASRLFELMP-----DKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVKGDKVTMM 1157
            ++ A + FEL       D  L   N++I       L  EAI  +  M   GV  +  T  
Sbjct: 76   LDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135

Query: 1156 AVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQVFQKMKEK 977
             V S C  + A      VH  + K  +  D+ +   L+  YA CG  +   +VF+ M E+
Sbjct: 136  FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195

Query: 976  DVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLVEQGKLIF 797
            +V +WT+ I   A     ++A+SLF EM++ G+ P +V  V V++AC+    ++ G+ + 
Sbjct: 196  NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVC 255

Query: 796  RSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLA 638
              +  + G+    V    +VD+  + G +  A  L +   ++ N +++  +L+
Sbjct: 256  AYI-GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDEC-VDRNLVLYNTILS 306



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 67/298 (22%), Positives = 113/298 (37%), Gaps = 31/298 (10%)
 Frame = -1

Query: 1411 ETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQES 1232
            + A R+F+   ++  V +NT+++ + R                               + 
Sbjct: 284  DAAKRLFDECVDRNLVLYNTILSNYAR-------------------------------QG 312

Query: 1231 LFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDT 1052
            L  EA+     M  +G + D+VTM++  SA   L      K  H Y+ +N +     +  
Sbjct: 313  LAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGN 372

Query: 1051 ALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEK--------------- 917
             ++DMY +CG PE + +VF  M  K V +W +        G+ E                
Sbjct: 373  VIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVF 432

Query: 916  ----------------AISLFDEMIKQGVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQ 785
                            AI LF EM  +G+  D V  +G+ +AC + G  E  K +   ++
Sbjct: 433  WNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIE 492

Query: 784  DDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLAACRTHNNVE 611
             + GIP  +     +VD+  R G    A ++   M  E +   W A +       N E
Sbjct: 493  KN-GIPCDMRLNTALVDMFARCGDPQSAMQVFNKM-TERDVSAWTAAIGTMAMEGNGE 548


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Glycine max]
          Length = 836

 Score =  647 bits (1669), Expect = 0.0
 Identities = 310/453 (68%), Positives = 376/453 (83%)
 Frame = -1

Query: 1411 ETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQES 1232
            E A +VF  MPNKT V+WN+++AG +R+ DME A R+F+ M ++DLVSWNTMIGALVQ S
Sbjct: 384  EAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVS 443

Query: 1231 LFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDT 1052
            +FEEAIE FR MQN+G+ GD+VTM+ +ASACGYLGA DLAKWV  YI+KNDIH D++L T
Sbjct: 444  MFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGT 503

Query: 1051 ALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMP 872
            ALVDM++RCGDP S+M VF++M+++DVSAWTAAI  MAMEGN E AI LF+EM++Q V P
Sbjct: 504  ALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKP 563

Query: 871  DAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHEL 692
            D V FV +LTACSH G V+QG+ +F SM+  +GI P IVHYGCMVDLLGRAGLL EA +L
Sbjct: 564  DDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL 623

Query: 691  IESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATELSPDKTGIHILLSNLYASAGKW 512
            I+SMP+EPN +VWG+LLAACR H NVELA YAA+  T+L+P++ GIH+LLSN+YASAGKW
Sbjct: 624  IQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKW 683

Query: 511  TDVVRVRMDMKAKGVHKLPGSSSIEVNGTIHEFTSCDESHPLTTQIVRMLDEMECKLKDA 332
            TDV RVR+ MK KGV K+PGSSSIEV G IHEFTS DESH   T I  ML+E+ C+L +A
Sbjct: 684  TDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEA 743

Query: 331  GHVPNLSNVLLDVDKHEKEHMLSRHSEKLAIAFGLISSDHGTKIHVVKNLRMCSDCHSFA 152
            G+VP+ +NVLLDVD+ EKEH+LSRHSEKLA+A+GLI++  G  I VVKNLRMCSDCHSFA
Sbjct: 744  GYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFA 803

Query: 151  KLVSGAYNREIVVRDNNRFHFFKGGLCSCKDYW 53
            KLVS  YNREI VRDNNR+HFFK G CSC+DYW
Sbjct: 804  KLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  107 bits (267), Expect = 8e-21
 Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 32/286 (11%)
 Frame = -1

Query: 1372 TTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQ 1193
            +T+  N +V  +++  D+ +A ++F+   +K+LV +NT++   V      + +     M 
Sbjct: 265  STIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEML 324

Query: 1192 NEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPE 1013
             +G + DKVTM++  +AC  LG   + K  H Y+ +N +     +  A++DMY +CG  E
Sbjct: 325  QKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKRE 384

Query: 1012 SSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIK------------------ 887
            ++ +VF+ M  K V  W + I  +  +G+ E A  +FDEM++                  
Sbjct: 385  AACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSM 444

Query: 886  -------------QGVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQ-DDYGIPPQIVHY 749
                         QG+  D V  VG+ +AC + G ++  K +   ++ +D  +  Q+   
Sbjct: 445  FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQL--G 502

Query: 748  GCMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLAACRTHNNVE 611
              +VD+  R G  + A  + + M  + +   W A +       N E
Sbjct: 503  TALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTE 547



 Score =  100 bits (249), Expect = 9e-19
 Identities = 65/251 (25%), Positives = 121/251 (48%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            N+++  +     ++   +LF+ M ++++VSW ++I       L +EA+  F  M   GV+
Sbjct: 169  NSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVE 228

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQV 998
             + VTM+ V SAC  L   +L K V +YI +  +     +  ALVDMY +CGD  ++ Q+
Sbjct: 229  PNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQI 288

Query: 997  FQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLV 818
            F +   K++  +   +            + + DEM+++G  PD V  +  + AC+  G +
Sbjct: 289  FDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDL 348

Query: 817  EQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLA 638
              GK     +  + G+         ++D+  + G    A ++ E MP     + W +L+A
Sbjct: 349  SVGKSSHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIA 406

Query: 637  ACRTHNNVELA 605
                  ++ELA
Sbjct: 407  GLVRDGDMELA 417



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
 Frame = -1

Query: 1378 NKTTVSWNTVVAGFIRNSDMESASRLFELMPDKD-----LVSWNTMIGALVQESLFEEAI 1214
            +K   + N ++A  ++   +ES         D D     L  +N +I       L ++AI
Sbjct: 56   HKPASNLNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAI 115

Query: 1213 EQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMY 1034
              +  M   G+  DK T   + SAC  + A      VH  + K  +  D+ +  +L+  Y
Sbjct: 116  LLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFY 175

Query: 1033 ARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFV 854
            A CG  +   ++F  M E++V +WT+ I   +     ++A+SLF +M + GV P+ V  V
Sbjct: 176  AECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMV 235

Query: 853  GVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPM 674
             V++AC+    +E GK +  S   + G+    +    +VD+  + G +  A ++ +    
Sbjct: 236  CVISACAKLKDLELGKKVC-SYISELGMELSTIMVNALVDMYMKCGDICAARQIFDEC-A 293

Query: 673  EPNAIVWGALLA 638
              N +++  +++
Sbjct: 294  NKNLVMYNTIMS 305


>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512083|gb|AES93706.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  606 bits (1562), Expect = e-171
 Identities = 285/453 (62%), Positives = 363/453 (80%)
 Frame = -1

Query: 1411 ETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQES 1232
            E A +VF+ M NKT V+WN+++AG +R+ ++E A R+F  MP+ +LVSWNTMIGA+VQ S
Sbjct: 376  EAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQAS 435

Query: 1231 LFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDT 1052
            +FEEAI+  R MQN+G+KGD+VTM+ +ASACGYLGA DLAKW++ YI+KNDIH DM+L T
Sbjct: 436  MFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGT 495

Query: 1051 ALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMP 872
            ALVDM++RCGDP ++M+VF+ M+++DVSAWTAAI   A+EGN + AI LFDEM+KQ V  
Sbjct: 496  ALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKA 555

Query: 871  DAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHEL 692
            D   FV +LTA SH G V+QG+ +F +M+  +G+ PQIVHYGCMVDLLGRAGLL EA +L
Sbjct: 556  DDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDL 615

Query: 691  IESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATELSPDKTGIHILLSNLYASAGKW 512
            ++SMP++PN ++WG+ LAACR H NVE A YA +  T+L+P+K GIH+LLSN+YASAGKW
Sbjct: 616  MKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKW 675

Query: 511  TDVVRVRMDMKAKGVHKLPGSSSIEVNGTIHEFTSCDESHPLTTQIVRMLDEMECKLKDA 332
             DV RVR+ MK KG  K+ GSSSIEV+G I EFTS DESH    QI  ML E+ C++   
Sbjct: 676  NDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQV 735

Query: 331  GHVPNLSNVLLDVDKHEKEHMLSRHSEKLAIAFGLISSDHGTKIHVVKNLRMCSDCHSFA 152
            G+VP+ +NVL+DVD+ EKEH+LSRHSEKLA+A+GLI++  G  I VVKNLRMCSDCHSFA
Sbjct: 736  GYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFA 795

Query: 151  KLVSGAYNREIVVRDNNRFHFFKGGLCSCKDYW 53
            KLVS  Y REI VRDNNR+HFFK G CSC+D+W
Sbjct: 796  KLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  112 bits (279), Expect = 3e-22
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 32/297 (10%)
 Frame = -1

Query: 1369 TVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQN 1190
            T+  N ++  +++  DM +   +F+   DK+LV +NT++   VQ  L  E +     M  
Sbjct: 258  TLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQ 317

Query: 1189 EGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPES 1010
            +G + DKVTM++  +AC  LG   + K  H Y+ +N +     +  A++DMY +CG  E+
Sbjct: 318  KGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREA 377

Query: 1009 SMQVFQKMKEKDVSAWTAAIVAMAMEGN-------------------------------G 923
            + +VF  M  K V  W + I  +  +G                                 
Sbjct: 378  ACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMF 437

Query: 922  EKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQ-DDYGIPPQIVHYG 746
            E+AI L  EM  QG+  D V  VG+ +AC + G ++  K I+  ++ +D  I  Q+    
Sbjct: 438  EEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQL--GT 495

Query: 745  CMVDLLGRAGLLTEAHELIESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATEL 575
             +VD+  R G    A  + E+M  + +   W A +       N       AK A EL
Sbjct: 496  ALVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGN-------AKGAIEL 544



 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 4/255 (1%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            N+++  +     ++   ++F+ M ++++VSW ++I      ++ +EA+  F  M   GV+
Sbjct: 161  NSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVE 220

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQV 998
             + VTM+   SAC  L   +L K V N + +  + S+  +  AL+DMY +CGD  +  ++
Sbjct: 221  PNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREI 280

Query: 997  FQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGLV 818
            F +  +K++  +   +      G   + + + DEM+++G  PD V  +  + AC+  G +
Sbjct: 281  FDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDL 340

Query: 817  EQGK----LIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIESMPMEPNAIVWG 650
              GK     +FR+     G+         ++D+  + G    A ++ +SM      + W 
Sbjct: 341  SVGKSSHAYVFRN-----GLERLDNISNAIIDMYMKCGKREAACKVFDSM-SNKTVVTWN 394

Query: 649  ALLAACRTHNNVELA 605
            +L+A       +ELA
Sbjct: 395  SLIAGLVRDGELELA 409



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 58/255 (22%), Positives = 120/255 (47%), Gaps = 6/255 (2%)
 Frame = -1

Query: 1384 MPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKD-----LVSWNTMIGALVQESLFEE 1220
            M  K   + N ++A  ++    ES +       + +     L + NT+I       L +E
Sbjct: 45   MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 104

Query: 1219 AIEQF-RVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALV 1043
            AI  +  ++   G+  D  T   + SAC  + A      VH  + K  +  D+ +  +L+
Sbjct: 105  AIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI 164

Query: 1042 DMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAV 863
              YA CG  +   +VF +M E++V +WT+ I   ++    ++A+ LF EM++ GV P+ V
Sbjct: 165  HFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPV 224

Query: 862  AFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHELIES 683
              V  ++AC+    +E GK +  ++  + G+    +    ++D+  + G +    E+ + 
Sbjct: 225  TMVCAISACAKLKDLELGKKVC-NLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDE 283

Query: 682  MPMEPNAIVWGALLA 638
               + N +++  +++
Sbjct: 284  F-SDKNLVMYNTIMS 297


>ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
            gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g22690 gi|9279687|dbj|BAB01244.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643145|gb|AEE76666.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 842

 Score =  598 bits (1541), Expect = e-168
 Identities = 286/454 (62%), Positives = 359/454 (79%), Gaps = 1/454 (0%)
 Frame = -1

Query: 1411 ETAFRVFNPMPNKTTVSWNTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQES 1232
            +TAFR+F+ M NKT V+WN++VAG++ N ++++A   FE MP+K++VSWNT+I  LVQ S
Sbjct: 389  DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448

Query: 1231 LFEEAIEQFRVMQN-EGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLD 1055
            LFEEAIE F  MQ+ EGV  D VTMM++ASACG+LGA DLAKW++ YI+KN I  D+RL 
Sbjct: 449  LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508

Query: 1054 TALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVM 875
            T LVDM++RCGDPES+M +F  +  +DVSAWTAAI AMAM GN E+AI LFD+MI+QG+ 
Sbjct: 509  TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568

Query: 874  PDAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDLLGRAGLLTEAHE 695
            PD VAFVG LTACSH GLV+QGK IF SM   +G+ P+ VHYGCMVDLLGRAGLL EA +
Sbjct: 569  PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628

Query: 694  LIESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATELSPDKTGIHILLSNLYASAGK 515
            LIE MPMEPN ++W +LLAACR   NVE+AAYAA+    L+P++TG ++LLSN+YASAG+
Sbjct: 629  LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688

Query: 514  WTDVVRVRMDMKAKGVHKLPGSSSIEVNGTIHEFTSCDESHPLTTQIVRMLDEMECKLKD 335
            W D+ +VR+ MK KG+ K PG+SSI++ G  HEFTS DESHP    I  MLDE+  +   
Sbjct: 689  WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASH 748

Query: 334  AGHVPNLSNVLLDVDKHEKEHMLSRHSEKLAIAFGLISSDHGTKIHVVKNLRMCSDCHSF 155
             GHVP+LSNVL+DVD+ EK  MLSRHSEKLA+A+GLISS+ GT I +VKNLR+CSDCHSF
Sbjct: 749  LGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSF 808

Query: 154  AKLVSGAYNREIVVRDNNRFHFFKGGLCSCKDYW 53
            AK  S  YNREI++RDNNRFH+ + G CSC D+W
Sbjct: 809  AKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQFRVMQNEGVK 1178
            + +V  +++ + ++ A RLF+     +L   N M    V++ L  EA+  F +M + GV+
Sbjct: 275  SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334

Query: 1177 GDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARC--------- 1025
             D+++M++  S+C  L      K  H Y+ +N   S   +  AL+DMY +C         
Sbjct: 335  PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394

Query: 1024 ----------------------GDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAI 911
                                  G+ +++ + F+ M EK++ +W   I  +      E+AI
Sbjct: 395  FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454

Query: 910  SLFDEMIKQ-GVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVD 734
             +F  M  Q GV  D V  + + +AC H G ++  K I+  ++ + GI   +     +VD
Sbjct: 455  EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVD 513

Query: 733  LLGRAGLLTEAHELIESMPMEPNAIVWGALLAACRTHNNVELAAYAAKNATE--LSPD 566
            +  R G    A  +  S+    +   W A + A     N E A     +  E  L PD
Sbjct: 514  MFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
 Frame = -1

Query: 1267 WNTMIGALVQESLFEEAIEQFRVMQNEGVKGDKVTMMAVASACGYLGAPDLAKWVHNYIK 1088
            +N++I       L  EAI  F  M N G+  DK T     SAC    A      +H  I 
Sbjct: 102  YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 1087 KNDIHSDMRLDTALVDMYARCGDPESSMQVFQKMKEKDVSAWTAAIVAMAMEGNGEKAIS 908
            K     D+ +  +LV  YA CG+ +S+ +VF +M E++V +WT+ I   A     + A+ 
Sbjct: 162  KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 907  LFDEMIK-QGVMPDAVAFVGVLTACSHSGLVEQGKLIFRSMQDDYGIPPQIVHYGCMVDL 731
            LF  M++ + V P++V  V V++AC+    +E G+ ++  +++  GI    +    +VD+
Sbjct: 222  LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDM 280

Query: 730  LGRAGLLTEAHELIE 686
              +   +  A  L +
Sbjct: 281  YMKCNAIDVAKRLFD 295



 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 48/185 (25%), Positives = 103/185 (55%), Gaps = 1/185 (0%)
 Frame = -1

Query: 1357 NTVVAGFIRNSDMESASRLFELMPDKDLVSWNTMIGALVQESLFEEAIEQF-RVMQNEGV 1181
            N++V  +    +++SA ++F+ M ++++VSW +MI    +    ++A++ F R++++E V
Sbjct: 173  NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232

Query: 1180 KGDKVTMMAVASACGYLGAPDLAKWVHNYIKKNDIHSDMRLDTALVDMYARCGDPESSMQ 1001
              + VTM+ V SAC  L   +  + V+ +I+ + I  +  + +ALVDMY +C   + + +
Sbjct: 233  TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292

Query: 1000 VFQKMKEKDVSAWTAAIVAMAMEGNGEKAISLFDEMIKQGVMPDAVAFVGVLTACSHSGL 821
            +F +    ++    A       +G   +A+ +F+ M+  GV PD ++ +  +++CS    
Sbjct: 293  LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352

Query: 820  VEQGK 806
            +  GK
Sbjct: 353  ILWGK 357