BLASTX nr result
ID: Aconitum21_contig00022397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00022397
(579 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containi... 270 2e-70
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,... 237 9e-61
ref|XP_002868306.1| pentatricopeptide repeat-containing protein ... 226 2e-57
ref|NP_193153.3| pentatricopeptide repeat-containing protein [Ar... 226 3e-57
gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|A... 226 3e-57
>ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 270 bits (689), Expect = 2e-70
Identities = 125/192 (65%), Positives = 159/192 (82%)
Frame = +2
Query: 2 FLQMRNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVT 181
FLQMR+ PDV+TLPLVLRACA+SG++ G++VHGLCV+MG + +LFVASALVF+YVT
Sbjct: 98 FLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVT 157
Query: 182 VGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSL 361
G+V + R +FD+MP+RD VLWTAML GYAQH EP+ +L ++R+MVS G+ LDGVVM+SL
Sbjct: 158 FGKVLDARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMVSAGVALDGVVMISL 217
Query: 362 LLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQRDV 541
LL C QL WL+HGKSVHGW RRCL LGL+LGNAL+ Y KC AL ++ +F +MP+RDV
Sbjct: 218 LLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALGYSYNLFDKMPERDV 277
Query: 542 ISWSTLIVGYGL 577
ISWS++I+GYGL
Sbjct: 278 ISWSSIILGYGL 289
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Frame = +2
Query: 104 VHGLCVKMGSDDNLFVASALVFLYVTVGRVC-EGRKVFDQMPQRDHVLWTAMLVGYAQHG 280
+H ++ DN+ ++S L+ +Y +G++ VF MP R+ W ++ +++
Sbjct: 30 LHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHSLSVFLHMPHRNIYSWNIIIGEFSRSH 89
Query: 281 EPLASLDLYRKMVSEGMQLDGVVMVSLLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGN 460
P S+DL+ +M D + +L C+ ++ G SVHG CV ++ L + +
Sbjct: 90 LPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHGLCVEMGMEKSLFVAS 149
Query: 461 ALIDVYTKCCALSSAHAVFMRMPQRDVISWSTLIVGY 571
AL+ +Y + A +F MP+RD + W+ ++ GY
Sbjct: 150 ALVFMYVTFGKVLDARVLFDEMPERDAVLWTAMLAGY 186
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/125 (29%), Positives = 66/125 (52%)
Frame = +2
Query: 2 FLQMRNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVT 181
F QM ++ V D + +L AC G + +G +VHG + L + +ALV+ YV
Sbjct: 199 FRQMVSAGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVK 258
Query: 182 VGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSL 361
+ +FD+MP+RD + W+++++GY G +LDL+ +M G++ + V +
Sbjct: 259 CAALGYSYNLFDKMPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGA 318
Query: 362 LLVCS 376
L C+
Sbjct: 319 LSACT 323
>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 488
Score = 237 bits (605), Expect = 9e-61
Identities = 122/195 (62%), Positives = 148/195 (75%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 FLQMR-NSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYV 178
F+ MR +S QPD ++LPLVLRACA SG G +VHGLCVKMG +LFV SALVF+YV
Sbjct: 124 FIDMRRDSHFQPDDFSLPLVLRACAGSGLGKLGSSVHGLCVKMGLAVSLFVGSALVFMYV 183
Query: 179 TVGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMV--SEGMQLDGVVM 352
T G V R VFD+M +RD VLWTA+L GYAQ+GEP L ++R+MV S ++LD VVM
Sbjct: 184 TFGNVSNARVVFDEMAKRDSVLWTALLSGYAQNGEPKLGLQVFREMVDNSTRVKLDWVVM 243
Query: 353 VSLLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQ 532
VSLLLVC QL L+HGKSVHGWCVR CL+L LSLGNA++ +Y KC L+ AH F +MP+
Sbjct: 244 VSLLLVCGQLGSLKHGKSVHGWCVRNCLRLELSLGNAIVHMYIKCGMLAYAHRFFDKMPE 303
Query: 533 RDVISWSTLIVGYGL 577
RDV SWS+LI+GYGL
Sbjct: 304 RDVFSWSSLILGYGL 318
Score = 72.8 bits (177), Expect = 4e-11
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Frame = +2
Query: 74 SSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVTVGRVC-EGRKVFDQMPQRDHVLWT 250
SS +T+ +H ++ DN+ ++S LV +Y R+ F MP ++ W
Sbjct: 46 SSPDLTHLRHLHARLLRTSLYDNVVLSSKLVLMYSHHNRLTPHSLSTFFHMPCKNIYSWN 105
Query: 251 AMLVGYAQHGEPLASLDLYRKMVSEG-MQLDGVVMVSLLLVCSQLRWLRHGKSVHGWCVR 427
++ +A+ P S+DL+ M + Q D + +L C+ + G SVHG CV+
Sbjct: 106 IIIGEFARSNLPEKSVDLFIDMRRDSHFQPDDFSLPLVLRACAGSGLGKLGSSVHGLCVK 165
Query: 428 RCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQRDVISWSTLIVGY 571
L + L +G+AL+ +Y +S+A VF M +RD + W+ L+ GY
Sbjct: 166 MGLAVSLFVGSALVFMYVTFGNVSNARVVFDEMAKRDSVLWTALLSGY 213
Score = 71.6 bits (174), Expect = 9e-11
Identities = 34/119 (28%), Positives = 66/119 (55%)
Frame = +2
Query: 17 NSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVTVGRVC 196
++RV+ D + +L C G++ +G +VHG CV+ L + +A+V +Y+ G +
Sbjct: 233 STRVKLDWVVMVSLLLVCGQLGSLKHGKSVHGWCVRNCLRLELSLGNAIVHMYIKCGMLA 292
Query: 197 EGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSLLLVC 373
+ FD+MP+RD W+++++GY G +L L+ +M G++ + V + +L C
Sbjct: 293 YAHRFFDKMPERDVFSWSSLILGYGLSGNVSVALCLFDQMHMRGIKPNDVTFLGILSAC 351
>ref|XP_002868306.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314142|gb|EFH44565.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 458
Score = 226 bits (576), Expect = 2e-57
Identities = 112/193 (58%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 FLQM-RNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYV 178
FL+M R S V+PD +TLPLVLRAC++S G +H LC+K+G + +LFV SALV +YV
Sbjct: 102 FLRMWRESNVRPDDFTLPLVLRACSASREAKFGDLIHVLCLKLGFNASLFVRSALVIMYV 161
Query: 179 TVGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVS 358
+G + RK+FD MP RD VL+TAM GY Q GE L L ++R+M G LD VVMVS
Sbjct: 162 DLGEILHARKLFDDMPVRDSVLYTAMFGGYVQQGEALLGLAVFREMRYSGFLLDSVVMVS 221
Query: 359 LLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQRD 538
LL+ C QL L+HGKSVHGWC+RRC GL+LGNA+ D+Y KC L AH VF+ MP+RD
Sbjct: 222 LLMACGQLGALKHGKSVHGWCIRRCSCFGLNLGNAITDMYVKCSILDYAHTVFVNMPRRD 281
Query: 539 VISWSTLIVGYGL 577
VISWS+LI+GYGL
Sbjct: 282 VISWSSLILGYGL 294
Score = 78.2 bits (191), Expect = 9e-13
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 FLQMRNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVT 181
F +MR S D + +L AC GA+ +G +VHG C++ S L + +A+ +YV
Sbjct: 204 FREMRYSGFLLDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCFGLNLGNAITDMYVK 263
Query: 182 VGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSL 361
+ VF MP+RD + W+++++GY G+ + S+ L+ +M+ EG++ + V + +
Sbjct: 264 CSILDYAHTVFVNMPRRDVISWSSLILGYGLDGDVVVSIKLFDEMLQEGIEPNAVTFLGV 323
Query: 362 LLVCSQLRWLRHGKSVH-GWCVRRCLQ 439
L C+ HG V W R +Q
Sbjct: 324 LSACA------HGGLVEKSWLYLRLMQ 344
>ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g14170 gi|332657989|gb|AEE83389.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 226 bits (575), Expect = 3e-57
Identities = 110/193 (56%), Positives = 142/193 (73%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 FLQM-RNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYV 178
FL+M R S V+PD +TLPL+LRAC++S +G +H LC+K+G +LFV+SALV +YV
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 179 TVGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVS 358
+G++ RK+FD MP RD VL+TAM GY Q GE + L ++R+M G LD VVMVS
Sbjct: 181 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 359 LLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQRD 538
LL+ C QL L+HGKSVHGWC+RRC LGL+LGNA+ D+Y KC L AH VF+ M +RD
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 539 VISWSTLIVGYGL 577
VISWS+LI+GYGL
Sbjct: 301 VISWSSLILGYGL 313
Score = 70.9 bits (172), Expect = 1e-10
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 FLQMRNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVT 181
F +M S D + +L AC GA+ +G +VHG C++ S L + +A+ +YV
Sbjct: 223 FREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVK 282
Query: 182 VGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSL 361
+ VF M +RD + W+++++GY G+ + S L+ +M+ EG++ + V + +
Sbjct: 283 CSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGV 342
Query: 362 LLVCSQLRWLRHGKSVH-GWCVRRCLQ 439
L C+ HG V W R +Q
Sbjct: 343 LSACA------HGGLVEKSWLYFRLMQ 363
Score = 56.2 bits (134), Expect = 4e-06
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +2
Query: 140 NLFVASALVFLYVTVGRVCE-GRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKM 316
N+ ++S LV Y + + VF MP R+ W ++ +++ G S+DL+ +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 317 VSEG-MQLDGVVMVSLLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCA 493
E ++ D + +L CS R + G +H C++ L + +AL+ +Y
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 494 LSSAHAVFMRMPQRDVISWSTLIVGY 571
L A +F MP RD + ++ + GY
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGY 210
>gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] gi|55733761|gb|AAV59277.1|
At4g14170 [Arabidopsis thaliana]
Length = 458
Score = 226 bits (575), Expect = 3e-57
Identities = 110/193 (56%), Positives = 142/193 (73%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 FLQM-RNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYV 178
FL+M R S V+PD +TLPL+LRAC++S +G +H LC+K+G +LFV+SALV +YV
Sbjct: 102 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 161
Query: 179 TVGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVS 358
+G++ RK+FD MP RD VL+TAM GY Q GE + L ++R+M G LD VVMVS
Sbjct: 162 DMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 221
Query: 359 LLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCALSSAHAVFMRMPQRD 538
LL+ C QL L+HGKSVHGWC+RRC LGL+LGNA+ D+Y KC L AH VF+ M +RD
Sbjct: 222 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 281
Query: 539 VISWSTLIVGYGL 577
VISWS+LI+GYGL
Sbjct: 282 VISWSSLILGYGL 294
Score = 70.9 bits (172), Expect = 1e-10
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 FLQMRNSRVQPDVYTLPLVLRACASSGAITNGMAVHGLCVKMGSDDNLFVASALVFLYVT 181
F +M S D + +L AC GA+ +G +VHG C++ S L + +A+ +YV
Sbjct: 204 FREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVK 263
Query: 182 VGRVCEGRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKMVSEGMQLDGVVMVSL 361
+ VF M +RD + W+++++GY G+ + S L+ +M+ EG++ + V + +
Sbjct: 264 CSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGV 323
Query: 362 LLVCSQLRWLRHGKSVH-GWCVRRCLQ 439
L C+ HG V W R +Q
Sbjct: 324 LSACA------HGGLVEKSWLYFRLMQ 344
Score = 56.2 bits (134), Expect = 4e-06
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +2
Query: 140 NLFVASALVFLYVTVGRVCE-GRKVFDQMPQRDHVLWTAMLVGYAQHGEPLASLDLYRKM 316
N+ ++S LV Y + + VF MP R+ W ++ +++ G S+DL+ +M
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 105
Query: 317 VSEG-MQLDGVVMVSLLLVCSQLRWLRHGKSVHGWCVRRCLQLGLSLGNALIDVYTKCCA 493
E ++ D + +L CS R + G +H C++ L + +AL+ +Y
Sbjct: 106 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 165
Query: 494 LSSAHAVFMRMPQRDVISWSTLIVGY 571
L A +F MP RD + ++ + GY
Sbjct: 166 LLHARKLFDDMPVRDSVLYTAMFGGY 191