BLASTX nr result

ID: Aconitum21_contig00022367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022367
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   169   2e-40
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...   159   3e-37
ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thalia...   159   3e-37
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...   153   2e-35

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/116 (67%), Positives = 92/116 (79%)
 Frame = -3

Query: 349 LPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELEKCRGWNQLEKHEWGDVFDIL 170
           LPSKPRSP+LVSDSV  LCDVGSPWRSQWKLFAC+L  L+K + W +L++HEWGDVFDIL
Sbjct: 191 LPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEWGDVFDIL 250

Query: 169 KRPWLIRGMGNKLLMVGGLKSSFSLTPSCSXXXXXXXXXXXLEWDEAGRMPLDMFR 2
           +RP L++G+GN++LMVGGLKSSFSL   CS           LEWDE GRMP +MFR
Sbjct: 251 RRPRLVKGLGNQILMVGGLKSSFSLNAVCSTILILRLDLDSLEWDELGRMPPEMFR 306


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/117 (65%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 LPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELEK-CRGWNQLEKHEWGDVFDI 173
           LPSKPRSP+L+SDSVF LCDVGSPWRSQWKLF C L++L      W  LE+ EWGD+FDI
Sbjct: 195 LPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNWVCLERQEWGDIFDI 254

Query: 172 LKRPWLIRGMGNKLLMVGGLKSSFSLTPSCSXXXXXXXXXXXLEWDEAGRMPLDMFR 2
           +KRP L+RG GNKLLM+GGLKS+FSL  SCS           LEW+EAGRMP+DM+R
Sbjct: 255 IKRPRLVRGKGNKLLMIGGLKSNFSLNTSCSTILILRLDLERLEWEEAGRMPVDMYR 311


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333503|gb|EFH63921.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/118 (66%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 LPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELEKCR-GWNQLEKHEWGDVFDI 173
           LPSKPRSPVL+S SVF LCDVGSPWRSQWKLF+C L  L      W  LEKHEWGD+FDI
Sbjct: 194 LPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEWGDIFDI 253

Query: 172 LKRPWLIRGMG-NKLLMVGGLKSSFSLTPSCSXXXXXXXXXXXLEWDEAGRMPLDMFR 2
           +KRP L+RG G +KLLM+GGLKS+FSL P+CS           LEW+EAGRMPL+M+R
Sbjct: 254 IKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEAGRMPLEMYR 311


>ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thaliana]
           gi|75098682|sp|O49279.1|SKI15_ARATH RecName:
           Full=SKP1-interacting partner 15; AltName: Full=F-box
           only protein 3 gi|2829924|gb|AAC00632.1| Unknown protein
           [Arabidopsis thaliana] gi|17473630|gb|AAL38278.1|
           unknown protein [Arabidopsis thaliana]
           gi|21553606|gb|AAM62699.1| F-box protein AtFBX3
           [Arabidopsis thaliana] gi|30725584|gb|AAP37814.1|
           At1g76920 [Arabidopsis thaliana]
           gi|332197782|gb|AEE35903.1| SKP1-interacting partner 15
           [Arabidopsis thaliana]
          Length = 374

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/118 (66%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 LPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELEKCR-GWNQLEKHEWGDVFDI 173
           LPSKPRSPVL+S SVF LCDVGSPWRSQWKLF+C L  L      W  LEKHEWGD+FDI
Sbjct: 194 LPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEWGDIFDI 253

Query: 172 LKRPWLIRGMG-NKLLMVGGLKSSFSLTPSCSXXXXXXXXXXXLEWDEAGRMPLDMFR 2
           +KRP L+RG G +KLLM+GGLKS+FSL P+CS           LEW+EAGRMPL+M+R
Sbjct: 254 IKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEAGRMPLEMYR 311


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
           gi|222856938|gb|EEE94485.1| f-box family protein
           [Populus trichocarpa]
          Length = 374

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/117 (61%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 LPSKPRSPVLVSDSVFTLCDVGSPWRSQWKLFACSLAELEKC-RGWNQLEKHEWGDVFDI 173
           LPSKPRSP+L+SDSVF LCDVGS WRSQWKLF C+L  L      W  L + EWGD+FDI
Sbjct: 193 LPSKPRSPILISDSVFALCDVGSRWRSQWKLFTCTLTNLNNSYNNWVCLGRLEWGDIFDI 252

Query: 172 LKRPWLIRGMGNKLLMVGGLKSSFSLTPSCSXXXXXXXXXXXLEWDEAGRMPLDMFR 2
           +KRP L+RG GNKLLM+G LKS+FSL PSCS           +EW+EAGRMP +M++
Sbjct: 253 IKRPRLVRGKGNKLLMIGVLKSNFSLNPSCSTILILRLDLARMEWEEAGRMPSEMYK 309


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