BLASTX nr result

ID: Aconitum21_contig00022182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022182
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica...   131   5e-29
emb|CBI22072.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica...   122   4e-26
ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [S...   120   9e-26

>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
           vinifera]
          Length = 1231

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/138 (52%), Positives = 93/138 (67%)
 Frame = -2

Query: 418 VYTFEAGLTNPERAVVHELCRKKGMVSKSKGKRNNRCVSVFKRKNKKQQDEKQMKNVSLT 239
           VYTFEA LTN ERAVVHE+CRK GM SKS G+ + R VSV+K K KK   +K+  N  L 
Sbjct: 41  VYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKTK-KKVDTKKEEGNPYLN 99

Query: 238 FSVETKEVLQDLFSRYPPGEGEQSKEKGRKHVEEFDKRRQTKDDSFQKPSISKAEIARKV 59
           FS E KEVL DLF+RYPP + E   +       + +K    KDD F +PS++KAEIA+KV
Sbjct: 100 FSEEAKEVLLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKV 159

Query: 58  EAIASKVNKSQNLRQIGE 5
           E +AS++ +  +LRQI E
Sbjct: 160 ELLASRIEEDPHLRQITE 177


>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
          Length = 1190

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/138 (52%), Positives = 93/138 (67%)
 Frame = -2

Query: 418 VYTFEAGLTNPERAVVHELCRKKGMVSKSKGKRNNRCVSVFKRKNKKQQDEKQMKNVSLT 239
           VYTFEA LTN ERAVVHE+CRK GM SKS G+ + R VSV+K K KK   +K+  N  L 
Sbjct: 41  VYTFEANLTNHERAVVHEVCRKMGMTSKSSGRGSQRRVSVYKTK-KKVDTKKEEGNPYLN 99

Query: 238 FSVETKEVLQDLFSRYPPGEGEQSKEKGRKHVEEFDKRRQTKDDSFQKPSISKAEIARKV 59
           FS E KEVL DLF+RYPP + E   +       + +K    KDD F +PS++KAEIA+KV
Sbjct: 100 FSEEAKEVLLDLFTRYPPDDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKV 159

Query: 58  EAIASKVNKSQNLRQIGE 5
           E +AS++ +  +LRQI E
Sbjct: 160 ELLASRIEEDPHLRQITE 177


>ref|XP_002307569.1| predicted protein [Populus trichocarpa] gi|222857018|gb|EEE94565.1|
           predicted protein [Populus trichocarpa]
          Length = 1195

 Score =  130 bits (327), Expect = 1e-28
 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = -2

Query: 418 VYTFEAGLTNPERAVVHELCRKKGMVSKSKGKRNNRCVSVFKRKNKKQQDEKQMKNVS-L 242
           VYTFEA L+N +RAVVHE+C+K GM SKS G+   R VSV+K   KK  D K  +N++ L
Sbjct: 39  VYTFEANLSNYDRAVVHEVCKKMGMKSKSSGRGGQRRVSVYK-NTKKLDDVKGKENLTHL 97

Query: 241 TFSVETKEVLQDLFSRYPPGEGEQSKEKGRKHVEEFDKRRQTKDDSFQKPSISKAEIARK 62
           TFS E+K VL +LFS YPP EG    E   KH     K R+ KDD F KPS  KAEIA+K
Sbjct: 98  TFSGESKMVLGELFSNYPPEEGGFGAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKK 157

Query: 61  VEAIASKVNKSQNLRQIGE 5
           VE+ AS++ K   L+QI E
Sbjct: 158 VESFASRIEKDVKLKQIVE 176


>ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
           distachyon]
          Length = 1272

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/138 (44%), Positives = 93/138 (67%)
 Frame = -2

Query: 418 VYTFEAGLTNPERAVVHELCRKKGMVSKSKGKRNNRCVSVFKRKNKKQQDEKQMKNVSLT 239
           V+TFEA ++  ERA +HE+CRK GM+SKSKG    RC+SV+KRK  +  D+++  +  L 
Sbjct: 115 VHTFEANISKQERAAIHEICRKMGMISKSKGYAERRCLSVYKRKQTQGPDKEEGPS-KLG 173

Query: 238 FSVETKEVLQDLFSRYPPGEGEQSKEKGRKHVEEFDKRRQTKDDSFQKPSISKAEIARKV 59
           FS E + VLQDLF+ YPP + E + E  +   ++  K +   D +F +P + K +IA+KV
Sbjct: 174 FSEEARNVLQDLFTHYPPTDAELNGEAVKNSSDKAAKIQWKTDSAFCRPVMHKHDIAKKV 233

Query: 58  EAIASKVNKSQNLRQIGE 5
           E +ASK+N+S+ LR+I E
Sbjct: 234 EILASKINESRQLRKIVE 251


>ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
           gi|241928377|gb|EES01522.1| hypothetical protein
           SORBIDRAFT_03g035700 [Sorghum bicolor]
          Length = 1299

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/138 (44%), Positives = 90/138 (65%)
 Frame = -2

Query: 418 VYTFEAGLTNPERAVVHELCRKKGMVSKSKGKRNNRCVSVFKRKNKKQQDEKQMKNVSLT 239
           VYTFE G++  ERA +H++CRK GM+SKS G    RC+SV+KRK K++ + ++  +  L 
Sbjct: 149 VYTFEPGISRQERAAIHQMCRKMGMLSKSSGNGEKRCLSVYKRKQKREPEMEEGPSY-LG 207

Query: 238 FSVETKEVLQDLFSRYPPGEGEQSKEKGRKHVEEFDKRRQTKDDSFQKPSISKAEIARKV 59
           FS E + VLQDLF  YPPG+ + + +  R   ++    +   D +F +P +SK +I +KV
Sbjct: 208 FSEEARHVLQDLFMHYPPGDADLNGDFDRNSSDKAANIKWKTDSAFCRPVMSKLDITKKV 267

Query: 58  EAIASKVNKSQNLRQIGE 5
           E +ASKVN S  LR+I E
Sbjct: 268 EMLASKVNGSYQLRKIME 285


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