BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022152
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   226   1e-57
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   218   3e-55
ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arab...   215   3e-54
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec...   214   6e-54

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  227 bits (578), Expect = 9e-58
 Identities = 105/120 (87%), Positives = 112/120 (93%)
 Frame = +2

Query: 152 IECLVLGAGQEVGKSCVVVSFGGKRIMFDCGMHMGHLDHRRYPDFSLIPNSPDFTNSLTC 331
           IECLVLGAGQEVGKSCVVV+  GKRIMFDCGMHMG+ DHRRYPDFSLI  S DF +SL C
Sbjct: 3   IECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSRDFDHSLDC 62

Query: 332 IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQFTS 511
           +IITHFHLDH+GALPYFTEVCGYNGPIYMTYPTKALAPLMLED+RKV+VDRRGEEEQFTS
Sbjct: 63  VIITHFHLDHVGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQFTS 122


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  226 bits (576), Expect = 1e-57
 Identities = 103/121 (85%), Positives = 113/121 (93%)
 Frame = +2

Query: 152 IECLVLGAGQEVGKSCVVVSFGGKRIMFDCGMHMGHLDHRRYPDFSLIPNSPDFTNSLTC 331
           IECLVLGAGQEVGKSCVVV+  GKRIMFDCGMHMG+ DHRRYPDFSLI  S DF ++L C
Sbjct: 3   IECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSGDFDSALHC 62

Query: 332 IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQFTS 511
           +IITHFHLDH+GALPYFTEVCGYNGP+YMTYPTKAL+PLMLEDYRKVMVDRRGEEEQFT+
Sbjct: 63  VIITHFHLDHVGALPYFTEVCGYNGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTA 122

Query: 512 E 514
           +
Sbjct: 123 D 123


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/121 (82%), Positives = 110/121 (90%)
 Frame = +2

Query: 152 IECLVLGAGQEVGKSCVVVSFGGKRIMFDCGMHMGHLDHRRYPDFSLIPNSPDFTNSLTC 331
           I+CLVLGAGQEVGKSCVVV+  GKRIMFDCGMH+G++DHRRYPDFS I  S D+ N L+C
Sbjct: 3   IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASHDYNNVLSC 62

Query: 332 IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQFTS 511
           IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPT ALAP+ LEDYRKVMVDRRGE EQFT+
Sbjct: 63  IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTN 122

Query: 512 E 514
           +
Sbjct: 123 D 123


>ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
           lyrata] gi|297320925|gb|EFH51346.1| hypothetical protein
           ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata]
          Length = 819

 Score =  215 bits (548), Expect = 3e-54
 Identities = 96/120 (80%), Positives = 110/120 (91%)
 Frame = +2

Query: 152 IECLVLGAGQEVGKSCVVVSFGGKRIMFDCGMHMGHLDHRRYPDFSLIPNSPDFTNSLTC 331
           I+CLVLGAGQE+GKSCVVV+  GKRIMFDCGMHMG  DH RYPDFSL+  S DF N+++C
Sbjct: 3   IDCLVLGAGQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLVSKSGDFDNAISC 62

Query: 332 IIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQFTS 511
           IIITHFH+DH+GALPYFTEVCGYNGPIYM+YPTKAL+PLMLEDYR+VMVDRRGE+E FT+
Sbjct: 63  IIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEDELFTT 122


>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Brachypodium distachyon]
          Length = 553

 Score =  214 bits (545), Expect = 6e-54
 Identities = 100/125 (80%), Positives = 113/125 (90%), Gaps = 4/125 (3%)
 Frame = +2

Query: 152 IECLVLGAGQEVGKSCVVVSFGGKRIMFDCGMHMGHLDHRRYPDFSLI----PNSPDFTN 319
           IECLVLGAGQEVGKSCVVV+ GGKRIMFDCGMHMG+ D  RYPDF+ I    P + DFT+
Sbjct: 3   IECLVLGAGQEVGKSCVVVTIGGKRIMFDCGMHMGYHDCNRYPDFARILAAAPETTDFTS 62

Query: 320 SLTCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEE 499
           +++C+IITHFHLDHIGALPYFTEVCGY+GPIYMTYPTKALAPLMLEDYRKVMVD+RGEEE
Sbjct: 63  AISCVIITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDQRGEEE 122

Query: 500 QFTSE 514
           Q++ E
Sbjct: 123 QYSYE 127