BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00022025
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    57   1e-06
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    57   1e-06
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    57   1e-06
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    57   2e-06

>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/157 (26%), Positives = 61/157 (38%)
 Frame = -1

Query: 506 WFRCKIWKRRSGLLFNNSNKSTSSVIYDILSQIRESQSMFKKPDKNDVTVQIERHLGTVL 327
           W   +IWK R+ ++FN   +S S  +   LS   E+         +  T    R +    
Sbjct: 267 WLIWRIWKARNNVVFNKFRESPSKTV---LSAKAETHDWLNATQSHKKTPSPTRQIAENK 323

Query: 326 ISPEMVWIHPNLGTIKYNSDAAFSQNWSSRHPSFGWISRDSNGNPVAASGCPNIHAASVL 147
           I     W +P    +K N DA F         + GWI R+  G P++       H ++ L
Sbjct: 324 IE----WRNPPATYVKCNFDAGFDVQ--KLEATGGWIIRNHYGTPISWGSMKLAHTSNPL 377

Query: 146 AAEGMALRDALHHAVRNNVVEAIFESDCLNLVCFCNG 36
            AE  AL  AL         +   E DC  L+   NG
Sbjct: 378 EAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING 414


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/157 (26%), Positives = 61/157 (38%)
 Frame = -1

Query: 506  WFRCKIWKRRSGLLFNNSNKSTSSVIYDILSQIRESQSMFKKPDKNDVTVQIERHLGTVL 327
            W   +IWK R+ ++FN   +S S  +   LS   E+         +  T    R +    
Sbjct: 1307 WLIWRIWKARNNVVFNKFRESPSKTV---LSAKAETHDWLNATQSHKKTPSPTRQIAENK 1363

Query: 326  ISPEMVWIHPNLGTIKYNSDAAFSQNWSSRHPSFGWISRDSNGNPVAASGCPNIHAASVL 147
            I     W +P    +K N DA F         + GWI R+  G P++       H ++ L
Sbjct: 1364 IE----WRNPPATYVKCNFDAGFDVQ--KLEATGGWIIRNHYGTPISWGSMKLAHTSNPL 1417

Query: 146  AAEGMALRDALHHAVRNNVVEAIFESDCLNLVCFCNG 36
             AE  AL  AL         +   E DC  L+   NG
Sbjct: 1418 EAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING 1454


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/157 (26%), Positives = 61/157 (38%)
 Frame = -1

Query: 506  WFRCKIWKRRSGLLFNNSNKSTSSVIYDILSQIRESQSMFKKPDKNDVTVQIERHLGTVL 327
            W   +IWK R+ ++FN   +S S  +   LS   E+         +  T    R +    
Sbjct: 1533 WLIWRIWKARNNVVFNKFRESPSKTV---LSAKAETHDWLNATQSHKKTPSPTRQIAENK 1589

Query: 326  ISPEMVWIHPNLGTIKYNSDAAFSQNWSSRHPSFGWISRDSNGNPVAASGCPNIHAASVL 147
            I     W +P    +K N DA F         + GWI R+  G P++       H ++ L
Sbjct: 1590 IE----WRNPPATYVKCNFDAGFDVQ--KLEATGGWIIRNHYGTPISWGSMKLAHTSNPL 1643

Query: 146  AAEGMALRDALHHAVRNNVVEAIFESDCLNLVCFCNG 36
             AE  AL  AL         +   E DC  L+   NG
Sbjct: 1644 EAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING 1680


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/147 (26%), Positives = 62/147 (42%)
 Frame = -1

Query: 506 WFRCKIWKRRSGLLFNNSNKSTSSVIYDILSQIRESQSMFKKPDKNDVTVQIERHLGTVL 327
           W   ++WK R+ L+F   + S  + +    + ++E +         +  V   RH    +
Sbjct: 122 WILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTM 181

Query: 326 ISPEMVWIHPNLGTIKYNSDAAFSQNWSSRHPSFGWISRDSNGNPVAASGCPNIHAASVL 147
              +  W  P    IKYN D AF  N  +R+   GW+ RD NG  + +        +  L
Sbjct: 182 ARTK--WQRPPSTWIKYNYDGAF--NHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSL 237

Query: 146 AAEGMALRDALHHAVRNNVVEAIFESD 66
            +E  AL  A+ HA      + IFE D
Sbjct: 238 ESEFQALIIAMQHAWSQGYRKVIFEGD 264