BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021994
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago t...    65   6e-09
ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arab...    64   2e-08
ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
ref|XP_003620181.1| Pentatricopeptide repeat-containing protein ...    63   2e-08

>ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479250|gb|AES60453.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 772

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -2

Query: 385 ALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGLDXXXXXXXX*-- 212
           AL L   ME +G+ +D+F YN++ + LC+  R+++   +  +M  KG+            
Sbjct: 411 ALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIE 470

Query: 211 -FVQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQK 35
            + +   +     L ++M  K G  P++   N L+D +CK +  K+A   +  +I+    
Sbjct: 471 IYCKEGNLAEAERLFRDMEKK-GEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529

Query: 34  PDIYTYTSLLY 2
           PD+YTY+SL++
Sbjct: 530 PDLYTYSSLIH 540


>ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata] gi|297338544|gb|EFH68961.1| hypothetical protein
           ARALYDRAFT_471420 [Arabidopsis lyrata subsp. lyrata]
          Length = 667

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
 Frame = -2

Query: 388 AALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGL---DXXXXXXX 218
           AA+SL   ME++G+ S +  YN ++  LC+  ++ D V L  +M  + +           
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 217 X*FVQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQ 38
             FV+   +     L KEM  K GISP+    N L+D +C  +    A    DL++  + 
Sbjct: 283 DVFVKEGKLQEANELYKEMITK-GISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341

Query: 37  KPDIYTYTSLL 5
            PDI T+TSL+
Sbjct: 342 SPDIVTFTSLI 352


>ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
 Frame = -2

Query: 385 ALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGL---DXXXXXXXX 215
           A+ LL  ME  GV  ++  YNM++D LC+E    +   L   M GKG+            
Sbjct: 180 AIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIH 239

Query: 214 *FVQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQK 35
            F  A        L+ EM +K  + PDV   NILVD  CKL     A     L+I    +
Sbjct: 240 GFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLE 299

Query: 34  PDIYTYTSLL 5
           PD+ +  +L+
Sbjct: 300 PDVVSCNALM 309


>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
 Frame = -2

Query: 385 ALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGLD---XXXXXXXX 215
           A+ L   M+++G   D F YNM+IDSLC   R E+ + L   M   G             
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499

Query: 214 *FVQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQK 35
            F + + I     +  EM ++ GIS +V   N L+D  CK    + A    D ++    K
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQ-GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558

Query: 34  PDIYTYTSLL 5
           PD +TY SLL
Sbjct: 559 PDKFTYNSLL 568



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -2

Query: 385 ALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGLDXXXXXXXX*F- 209
           ALSLL  MES G + ++  YN +ID  C+ +R E+  +++  M  +G+            
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534

Query: 208 --VQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQK 35
              + R +     L+ +M ++ G+ PD    N L+  FC+  D K+A      + S   +
Sbjct: 535 GLCKNRRVEEAAQLMDQMLME-GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCE 593

Query: 34  PDIYTYTSLL 5
           PD  TY +L+
Sbjct: 594 PDSVTYGTLI 603


>ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495196|gb|AES76399.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 559

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
 Frame = -2

Query: 388 AALSLLVTMESRGVTSDMFNYNMIIDSLCREERFEDVVDLYLNMFGKGLDXXXXXXXX*- 212
           AAL LL  ++ + V  ++  YN IIDS+C+ +   +  DLY  M  KG+           
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254

Query: 211 --FVQAR*IPTTTLLIKEMNVKWGISPDVKMLNILVDKFCKLDDFKRAFMYRDLIISTSQ 38
             F     +   T L  +M  +  I+P+V   NILVD FCK    K A     +++    
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFE-NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313

Query: 37  KPDIYTYTSLL 5
           KPD++TY SL+
Sbjct: 314 KPDVFTYNSLM 324