BLASTX nr result

ID: Aconitum21_contig00021811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021811
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   129   2e-28
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   127   1e-27
ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [S...   109   3e-22
gb|ACN27500.1| unknown [Zea mays] gi|224030613|gb|ACN34382.1| un...   108   8e-22

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/99 (62%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   DVPFLIKEFSRCSEEIPSDWRFLDTLPLARELAKLEGTENLSGKSVQALREYYGIPLIGK 182
           DVPFLI EFSRC+ E+P +WRFLDTLPLAREL K  G++   G S+QALREYY IPL+G 
Sbjct: 224 DVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGP 283

Query: 183 AHNAMSDVHTLSRVLQEMTKDLKLPVTSLMERSFKASEV 299
           AH  +SDV+TLS+VLQ +T +LK+ V +L++RSF AS++
Sbjct: 284 AHRVLSDVYTLSQVLQMLTFNLKVSVANLLDRSFTASDI 322


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/99 (62%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   DVPFLIKEFSRCSEEIPSDWRFLDTLPLARELAKLEGTENLSGKSVQALREYYGIPLIGK 182
           DVPFLI EFSRC+ E+P +WRFLDTLPLAREL K  G++   G S+QALREYY IPL+G 
Sbjct: 229 DVPFLINEFSRCNTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGP 288

Query: 183 AHNAMSDVHTLSRVLQEMTKDLKLPVTSLMERSFKASEV 299
           AH  +SDV+TLS+VLQ +T +LK+ V +L++RSF AS++
Sbjct: 289 AHRVLSDVYTLSQVLQMLTFNLKVSVANLLDRSFTASDI 327


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/99 (59%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   DVPFLIKEFSRCSEEIPSDWRFLDTLPLARELAKLEGTENLSGKSVQALREYYGIPLIGK 182
           DVPFLI EFSRC+ E+P +WRF+DTLPLARE  K  G++  SG S+QALREY+ IPL+G 
Sbjct: 232 DVPFLINEFSRCNTEVPPNWRFMDTLPLAREFIKSAGSDLPSGASLQALREYFRIPLVGP 291

Query: 183 AHNAMSDVHTLSRVLQEMTKDLKLPVTSLMERSFKASEV 299
           AH  +SDV+TLS++LQ +T +LK+ V +L++RSF AS++
Sbjct: 292 AHRVLSDVYTLSQILQMLTFNLKVSVANLLDRSFTASDI 330


>ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [Sorghum bicolor]
           gi|241921854|gb|EER94998.1| hypothetical protein
           SORBIDRAFT_01g037840 [Sorghum bicolor]
          Length = 583

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/99 (56%), Positives = 73/99 (73%)
 Frame = +3

Query: 3   DVPFLIKEFSRCSEEIPSDWRFLDTLPLARELAKLEGTENLSGKSVQALREYYGIPLIGK 182
           DVPFLI EF RC  E+P DW F+DTLP+AR+L   +G++ LS  S++ LRE Y IPL G 
Sbjct: 479 DVPFLIFEFRRCKLEMPGDWLFVDTLPIARQLVDSDGSK-LSSVSLKNLRERYNIPLTGS 537

Query: 183 AHNAMSDVHTLSRVLQEMTKDLKLPVTSLMERSFKASEV 299
           AH AM DV TL  VLQ++T +LKL V  L+E+SF+AS++
Sbjct: 538 AHRAMQDVTTLCYVLQKLTFELKLTVPQLLEKSFQASDL 576


>gb|ACN27500.1| unknown [Zea mays] gi|224030613|gb|ACN34382.1| unknown [Zea mays]
           gi|414866403|tpg|DAA44960.1| TPA: DNA polymerase III
           subunit epsilon isoform 1 [Zea mays]
           gi|414866404|tpg|DAA44961.1| TPA: DNA polymerase III
           subunit epsilon isoform 2 [Zea mays]
           gi|414866405|tpg|DAA44962.1| TPA: DNA polymerase III
           subunit epsilon isoform 3 [Zea mays]
          Length = 315

 Score =  108 bits (269), Expect = 8e-22
 Identities = 55/99 (55%), Positives = 73/99 (73%)
 Frame = +3

Query: 3   DVPFLIKEFSRCSEEIPSDWRFLDTLPLARELAKLEGTENLSGKSVQALREYYGIPLIGK 182
           DVPFL+ EF RC  E+P DW F+DTLP+A++L    G++ LS  S++ LRE Y IPL G 
Sbjct: 211 DVPFLMFEFRRCKVEMPGDWLFVDTLPIAKQLVDSNGSK-LSSVSLKFLRERYKIPLTGS 269

Query: 183 AHNAMSDVHTLSRVLQEMTKDLKLPVTSLMERSFKASEV 299
           AH AM DV TLS VLQ++T +LKL V  L+E+SF+AS++
Sbjct: 270 AHRAMQDVTTLSYVLQKLTFELKLTVPQLLEKSFRASDL 308


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