BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021808
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12
emb|CBI39592.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
 Frame = +1

Query: 70  KFLLSSPNFSQTLKPFSS------LPSNHPQHLDQSTILQLISNQHYRELKTLIINQTTP 231
           +F    P  + T  PFSS       P++H    D  TI QLI+ QH+ +LKT I+ +T P
Sbjct: 17  RFPSLDPKLNNTKTPFSSPNSTYTTPNSHT--FDTPTISQLIAKQHWSKLKT-IVKETNP 73

Query: 232 HNXXXXXXXXXXXXXXXXRYFNWSQKEFKITYQLKQHCELFQLLINSKEYGETRAQIDKF 411
            +                 YF W+QKEF   + ++Q C L  LL N+K Y + RA +D F
Sbjct: 74  SSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF 133

Query: 412 VKKTPGESISISSIFH 459
            K       S S+IFH
Sbjct: 134 AKNA---HYSNSTIFH 146


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/136 (35%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
 Frame = +1

Query: 70  KFLLSSPNFSQTLKPFSS------LPSNHPQHLDQSTILQLISNQHYRELKTLIINQTTP 231
           +F    P  + T  PFSS       P++H    D  TI QLI+ QH+ +LKT I+ +T P
Sbjct: 17  RFPSLDPKLNNTKTPFSSPNSTYTTPNSHT--FDTPTISQLIAKQHWSKLKT-IVKETNP 73

Query: 232 HNXXXXXXXXXXXXXXXXRYFNWSQKEFKITYQLKQHCELFQLLINSKEYGETRAQIDKF 411
            +                 YF W+QKEF   + ++Q C L  LL N+K Y + RA +D F
Sbjct: 74  SSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSF 133

Query: 412 VKKTPGESISISSIFH 459
            K       S S+IFH
Sbjct: 134 AKNA---HYSNSTIFH 146


>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/106 (39%), Positives = 58/106 (54%)
 Frame = +1

Query: 142 QHLDQSTILQLISNQHYRELKTLIINQTTPHNXXXXXXXXXXXXXXXXRYFNWSQKEFKI 321
           Q L  STI +L+SNQH+ ELK      T P                  R+F WSQKEF+I
Sbjct: 16  QSLSISTISELLSNQHWSELKPHF-RTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRI 74

Query: 322 TYQLKQHCELFQLLINSKEYGETRAQIDKFVKKTPGESISISSIFH 459
           +Y L+   ++  LL NSK+Y + R+ +DK VK    E  ++SS+FH
Sbjct: 75  SYGLETTGKVLHLLANSKKYSKVRSFLDKLVK---NEKHTVSSVFH 117


>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510082|gb|AES91224.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/106 (34%), Positives = 55/106 (51%)
 Frame = +1

Query: 142 QHLDQSTILQLISNQHYRELKTLIINQTTPHNXXXXXXXXXXXXXXXXRYFNWSQKEFKI 321
           Q L   TI +L+S QH+ ELK  +   T P                  R+F WSQKE+++
Sbjct: 16  QSLSIPTISELLSKQHWSELKPHL-RVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRL 74

Query: 322 TYQLKQHCELFQLLINSKEYGETRAQIDKFVKKTPGESISISSIFH 459
           +Y L+   ++   L NSK Y + R+ +D FVK    E  ++SS+FH
Sbjct: 75  SYGLEPTSKVLHFLANSKRYSKVRSFLDSFVK---NEKHTVSSVFH 117


>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +1

Query: 103 TLKPFSSLPSNHPQHLDQSTILQLISNQHYRELKTLIINQTTPHNXXXXXXXXXXXXXXX 282
           T  P  + P ++    D   I  LIS Q +  LK+ +  ++                   
Sbjct: 33  TYNPTCTAPISND--FDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLV 90

Query: 283 XRYFNWSQKEFKITYQLKQHCELFQLLINSKEYGETRAQIDKFVKKTPGE-SISISSIFH 459
            RYFNWS++E  + Y ++  C L  LL N+K Y + R+ +D FVK   GE + SIS IFH
Sbjct: 91  LRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVK---GETNCSISLIFH 147