BLASTX nr result

ID: Aconitum21_contig00021746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021746
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311786.1| SIN3 component, histone deacetylase complex ...   215   3e-54
ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein ...   214   5e-54
ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein ...   213   2e-53
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...   212   2e-53
ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm...   211   7e-53

>ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
           gi|222851606|gb|EEE89153.1| SIN3 component, histone
           deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score =  215 bits (548), Expect = 3e-54
 Identities = 120/201 (59%), Positives = 141/201 (70%), Gaps = 25/201 (12%)
 Frame = +1

Query: 1   QRIDTTGVIATIKELFKGNRDLILGFNTFLPKGYEITLPFEDDTL-LKKPVELEEAINFV 177
           QRIDT GVIA +KELFKG+RDLILGFNTFLPKGYEITLP E++    KKPVE EEAINFV
Sbjct: 46  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEEEQPPQKKPVEFEEAINFV 105

Query: 178 NKIKMQTRFQNDDCVYIQFLEILNMYRKEKKTITEVYQEVAILFRDHRDLLDEFTHFLPE 357
           NKIK  TRFQ DD VY  FL+ILNMYRKE K+I+EVYQEVA LFRDH DLL EFTHFLP+
Sbjct: 106 NKIK--TRFQGDDHVYKSFLDILNMYRKENKSISEVYQEVAALFRDHHDLLLEFTHFLPD 163

Query: 358 AST----------------------LLRLTHRD-TERGMTSHAERDLTVDHPDAKKS-SS 465
           +S                        +R  H D  ER M SHAERD++VD PD     + 
Sbjct: 164 SSAAASALFPSARNSAPRDRSSAMPTMRQMHVDKKERAMASHAERDISVDRPDPDHDRAM 223

Query: 466 LKMDEEQRRLTERDNERKEDK 528
           ++ D++QRR  E++ ER+ED+
Sbjct: 224 IRADKDQRRRVEKEKERREDR 244


>ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1407

 Score =  214 bits (546), Expect = 5e-54
 Identities = 118/200 (59%), Positives = 137/200 (68%), Gaps = 24/200 (12%)
 Frame = +1

Query: 1   QRIDTTGVIATIKELFKGNRDLILGFNTFLPKGYEITLPFEDDTLL-KKPVELEEAINFV 177
           QRIDT GVIA +KELFKG+RDLILGFNTFLPKGYEITLP ED+ L  KKPVE EEAINFV
Sbjct: 76  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDEQLAPKKPVEFEEAINFV 135

Query: 178 NKIKMQTRFQNDDCVYIQFLEILNMYRKEKKTITEVYQEVAILFRDHRDLLDEFTHFLPE 357
           NKIK  TRFQ DD VY  FL+ILNMYRKE K+ITEVYQEVA +F+DH DLLDEFTHFLP+
Sbjct: 136 NKIK--TRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAIFQDHPDLLDEFTHFLPD 193

Query: 358 AS-----------------------TLLRLTHRDTERGMTSHAERDLTVDHPDAKKSSSL 468
           AS                       T+ +L     ER + SH + D +VD PD      L
Sbjct: 194 ASAAASTHFVSARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDNDRGL 253

Query: 469 KMDEEQRRLTERDNERKEDK 528
              E++RR  E++ ER+ED+
Sbjct: 254 LRIEKERRRVEKEKERREDR 273


>ref|XP_003517876.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1414

 Score =  213 bits (541), Expect = 2e-53
 Identities = 118/200 (59%), Positives = 136/200 (68%), Gaps = 24/200 (12%)
 Frame = +1

Query: 1   QRIDTTGVIATIKELFKGNRDLILGFNTFLPKGYEITLPFEDDTLL-KKPVELEEAINFV 177
           QRIDT GVIA +KELFKG+RDLILGFNTFLPKGYEITLP EDD    KKPVE EEAINFV
Sbjct: 76  QRIDTVGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDDQPAPKKPVEFEEAINFV 135

Query: 178 NKIKMQTRFQNDDCVYIQFLEILNMYRKEKKTITEVYQEVAILFRDHRDLLDEFTHFLPE 357
           NKIK  TRFQ DD VY  FL+ILNMYRKE K+ITEVYQEVA +F+DH DLLDEFTHFLP+
Sbjct: 136 NKIK--TRFQGDDHVYKSFLDILNMYRKEDKSITEVYQEVAAIFQDHPDLLDEFTHFLPD 193

Query: 358 AS-----------------------TLLRLTHRDTERGMTSHAERDLTVDHPDAKKSSSL 468
           AS                       T+ +L     ER + SH + D +VD PD      L
Sbjct: 194 ASAAASTHYASARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDHDRGL 253

Query: 469 KMDEEQRRLTERDNERKEDK 528
              E++RR  E++ ER+ED+
Sbjct: 254 LRIEKERRRVEKEKERREDR 273


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
           gi|222863669|gb|EEF00800.1| SIN3 component, histone
           deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score =  212 bits (540), Expect = 2e-53
 Identities = 119/201 (59%), Positives = 139/201 (69%), Gaps = 25/201 (12%)
 Frame = +1

Query: 1   QRIDTTGVIATIKELFKGNRDLILGFNTFLPKGYEITLPFEDDTL-LKKPVELEEAINFV 177
           QRIDT GVIA +KELFKG+RDLILGFNTFLPKGYEITLP ED+    KKPVE EEAINFV
Sbjct: 50  QRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFV 109

Query: 178 NKIKMQTRFQNDDCVYIQFLEILNMYRKEKKTITEVYQEVAILFRDHRDLLDEFTHFLPE 357
           NKIK  TRFQ DD VY  FL+ILN+YRKE K+I+EVYQEVA LFRDH DLL EFTHFLP+
Sbjct: 110 NKIK--TRFQGDDRVYKSFLDILNLYRKENKSISEVYQEVASLFRDHHDLLLEFTHFLPD 167

Query: 358 AST----------------------LLRLTHRD-TERGMTSHAERDLTVDHPDAKKS-SS 465
           +S                        +R  H D  ER   SHA+RD +VD PD     S 
Sbjct: 168 SSAAASAHFPTGRNPALRDRSSAMPTMRQMHVDKKERATASHADRDFSVDRPDPDHDRSM 227

Query: 466 LKMDEEQRRLTERDNERKEDK 528
           ++ D++QRR  E++ ER+ED+
Sbjct: 228 IRADKDQRRRAEKEKERREDR 248


>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
           gi|223540688|gb|EEF42251.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1452

 Score =  211 bits (536), Expect = 7e-53
 Identities = 120/202 (59%), Positives = 139/202 (68%), Gaps = 26/202 (12%)
 Frame = +1

Query: 1   QRIDTTGVIATIKELFKGNRDLILGFNTFLPKGYEITLPFEDDTL-LKKPVELEEAINFV 177
           QRIDT GVIA +K+LFKG+RDLILGFNTFLPKGYEITLP ED+    KKPVE EEAINFV
Sbjct: 100 QRIDTAGVIARVKDLFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQKKPVEFEEAINFV 159

Query: 178 NKIKMQTRFQNDDCVYIQFLEILNMYRKEKKTITEVYQEVAILFRDHRDLLDEFTHFLPE 357
           NKIK  TRFQ DD VY  FL+ILNMYRKE K+ITEVYQEVA LF+DH DLL EFTHFLP+
Sbjct: 160 NKIK--TRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPD 217

Query: 358 AST-----------------------LLRLTHRDTERGMT-SHAERDLTVDHPDAKKSSS 465
           +S                         +R  H D +  MT SHA+ D +VD PD     S
Sbjct: 218 SSATASAHYAPSVRNSIHRDRSSAMPTMRQMHIDKKERMTASHADCDFSVDRPDPDHDRS 277

Query: 466 L-KMDEEQRRLTERDNERKEDK 528
           L + D+EQRR  E++ ER+ED+
Sbjct: 278 LIRSDKEQRRRGEKEKERREDR 299


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