BLASTX nr result

ID: Aconitum21_contig00021741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021741
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513540.1| cap binding protein, putative [Ricinus commu...    61   1e-07
ref|XP_003548901.1| PREDICTED: nuclear cap-binding protein subun...    60   2e-07
ref|XP_003553301.1| PREDICTED: nuclear cap-binding protein subun...    59   5e-07
ref|XP_003632252.1| PREDICTED: nuclear cap-binding protein subun...    57   1e-06
gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]         57   1e-06

>ref|XP_002513540.1| cap binding protein, putative [Ricinus communis]
           gi|223547448|gb|EEF48943.1| cap binding protein,
           putative [Ricinus communis]
          Length = 824

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
 Frame = +3

Query: 3   DTMAVDSEEPSEMEVDRDLEKSKKRLSNG------YNLGEKEQWCLTTLGYV 140
           D M VD +E SEM+VD +  + KK  SNG      YN+GEKEQWCL+TLGYV
Sbjct: 727 DEMVVDLDESSEMDVDNENGRPKKSQSNGEKSSYVYNIGEKEQWCLSTLGYV 778


>ref|XP_003548901.1| PREDICTED: nuclear cap-binding protein subunit 1-like [Glycine max]
          Length = 853

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +3

Query: 9   MAVDSEEPSEMEVDRDLEKSKKRLSNGYNLGEKEQWCLTTLGYV 140
           MAVD EEPS ME+D       +R  N YN+GEKEQWC+TTLGYV
Sbjct: 768 MAVDPEEPSSMELDNQ----NQRPQNSYNVGEKEQWCITTLGYV 807


>ref|XP_003553301.1| PREDICTED: nuclear cap-binding protein subunit 1-like [Glycine max]
          Length = 863

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
 Frame = +3

Query: 9   MAVDSEEPSEMEVDRDLEKSKKRLSNG------YNLGEKEQWCLTTLGYV 140
           MAVD EEPS ME+D + ++ +   +NG      YN+GEKEQWC+ TLGYV
Sbjct: 768 MAVDPEEPSSMELDNESQRPQNSQTNGEKKGGAYNVGEKEQWCIITLGYV 817


>ref|XP_003632252.1| PREDICTED: nuclear cap-binding protein subunit 1-like isoform 2
           [Vitis vinifera] gi|296083820|emb|CBI24208.3| unnamed
           protein product [Vitis vinifera]
          Length = 865

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
 Frame = +3

Query: 3   DTMAVDSEEPSEMEVDRDLEKSKK------RLSNGYNLGEKEQWCLTTLGYV 140
           D MAVD EE S M+VD +  + +K      + +NGYN+GEKEQWCL+ LGYV
Sbjct: 768 DEMAVDLEESSTMDVDNENGRPQKSQTNGGKANNGYNVGEKEQWCLSILGYV 819


>gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 861

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
 Frame = +3

Query: 3   DTMAVDSEEPSEMEVDRDLEKSKKRLSNG------YNLGEKEQWCLTTLGYV 140
           D M +D E+ S ME+D+D E+ KK   NG      YNL EK+QWCLTTLGY+
Sbjct: 765 DDMTIDLEDSSAMELDKDDEQPKKSHPNGSGERKGYNLDEKQQWCLTTLGYL 816


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