BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021733
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   227   1e-57
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              227   1e-57
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   219   2e-55
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   212   5e-53
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   209   2e-52

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  227 bits (578), Expect = 1e-57
 Identities = 118/213 (55%), Positives = 155/213 (72%), Gaps = 7/213 (3%)
 Frame = -2

Query: 618  RAGSKGNILKLIQQGVALGLQHSSIPLSFSIP----CKSKFKSDYEAI---DTPQSSDNN 460
            +AGSKGN+LKL+QQG+ LGLQHS +PLSF IP    C +  K     +   DT + +++ 
Sbjct: 763  KAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESY 822

Query: 459  VPYAVVESSFLKGLDPVECFMHSVSSRSVSFADNAEVPGTIFKKLMFFMRDLYVAYDGTV 280
            +PYAVVE+SFL GL+P+ECF+HSV+SR  SF+DNA++PGT+ ++LMFFMRDLY+AYDGTV
Sbjct: 823  IPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTV 882

Query: 279  RSSNGNHLYQFSYGVPKESSVQNNSNHELFVESTYDSVQSGDPVGSSAACSISEAAYSAL 100
            R++ GN L QFSY +   S+  +  N +      YD    G PVGS +AC+ISEAAYSAL
Sbjct: 883  RNAYGNQLVQFSYNIEHTSTPSDGINED---TCAYD--MGGQPVGSISACAISEAAYSAL 937

Query: 99   DQPISTLESSPLLNLKNLLESSQKKTAVNQTAS 1
            DQPIS LE SPLLNLK +LE   +K+  ++T S
Sbjct: 938  DQPISLLEPSPLLNLKRVLECGLRKSTADRTVS 970


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  227 bits (578), Expect = 1e-57
 Identities = 118/213 (55%), Positives = 155/213 (72%), Gaps = 7/213 (3%)
 Frame = -2

Query: 618  RAGSKGNILKLIQQGVALGLQHSSIPLSFSIP----CKSKFKSDYEAI---DTPQSSDNN 460
            +AGSKGN+LKL+QQG+ LGLQHS +PLSF IP    C +  K     +   DT + +++ 
Sbjct: 632  KAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESY 691

Query: 459  VPYAVVESSFLKGLDPVECFMHSVSSRSVSFADNAEVPGTIFKKLMFFMRDLYVAYDGTV 280
            +PYAVVE+SFL GL+P+ECF+HSV+SR  SF+DNA++PGT+ ++LMFFMRDLY+AYDGTV
Sbjct: 692  IPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTV 751

Query: 279  RSSNGNHLYQFSYGVPKESSVQNNSNHELFVESTYDSVQSGDPVGSSAACSISEAAYSAL 100
            R++ GN L QFSY +   S+  +  N +      YD    G PVGS +AC+ISEAAYSAL
Sbjct: 752  RNAYGNQLVQFSYNIEHTSTPSDGINED---TCAYD--MGGQPVGSISACAISEAAYSAL 806

Query: 99   DQPISTLESSPLLNLKNLLESSQKKTAVNQTAS 1
            DQPIS LE SPLLNLK +LE   +K+  ++T S
Sbjct: 807  DQPISLLEPSPLLNLKRVLECGLRKSTADRTVS 839


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  219 bits (559), Expect = 2e-55
 Identities = 115/199 (57%), Positives = 147/199 (73%), Gaps = 7/199 (3%)
 Frame = -2

Query: 618  RAGSKGNILKLIQQGVALGLQHSSIPLSFSIP----CKSKFKSDYEAI---DTPQSSDNN 460
            +AGSKGN+LKL+QQG+ LGLQHS +PLSF IP    C +  K     +   DT + +++ 
Sbjct: 733  KAGSKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESY 792

Query: 459  VPYAVVESSFLKGLDPVECFMHSVSSRSVSFADNAEVPGTIFKKLMFFMRDLYVAYDGTV 280
            +PYAVVE+SFL GL+P+ECF+HSV+SR  SF+DNA++PGT+ ++LMFFMRDLY+AYDGTV
Sbjct: 793  IPYAVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTV 852

Query: 279  RSSNGNHLYQFSYGVPKESSVQNNSNHELFVESTYDSVQSGDPVGSSAACSISEAAYSAL 100
            R++ GN L QFSY +   S+  +  N +      YD    G PVGS +AC+ISEAAYSAL
Sbjct: 853  RNAYGNQLVQFSYNIEHTSTPSDGINED---TCAYD--MGGQPVGSISACAISEAAYSAL 907

Query: 99   DQPISTLESSPLLNLKNLL 43
            DQPIS LE SPLLNLKN L
Sbjct: 908  DQPISLLEPSPLLNLKNHL 926


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  212 bits (539), Expect = 5e-53
 Identities = 112/214 (52%), Positives = 143/214 (66%), Gaps = 8/214 (3%)
 Frame = -2

Query: 618  RAGSKGNILKLIQQGVALGLQHSSIPLSFSIPCK--------SKFKSDYEAIDTPQSSDN 463
            +AGSKGN++KL+Q  + LGLQHS + LSFS+P K         K     +    P  + +
Sbjct: 741  KAGSKGNLMKLVQHSMCLGLQHSLVTLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQS 800

Query: 462  NVPYAVVESSFLKGLDPVECFMHSVSSRSVSFADNAEVPGTIFKKLMFFMRDLYVAYDGT 283
             +PYAVVE+SFL GL+P ECF HSV++R  SF+DNAEVPGT+ +KL F MRD+Y AYDGT
Sbjct: 801  FIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGT 860

Query: 282  VRSSNGNHLYQFSYGVPKESSVQNNSNHELFVESTYDSVQSGDPVGSSAACSISEAAYSA 103
            VR++ GN L QF Y + + +S   + N      +  D    G PVGS AAC+ISEAAYSA
Sbjct: 861  VRNAYGNQLVQFCYDIDRPTSESESEN------NNRDRGIGGHPVGSLAACAISEAAYSA 914

Query: 102  LDQPISTLESSPLLNLKNLLESSQKKTAVNQTAS 1
            LDQPIS LE+SPLLNLK +LE   K+ +  QT S
Sbjct: 915  LDQPISLLEASPLLNLKRVLECGSKRNSTKQTFS 948


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  209 bits (533), Expect = 2e-52
 Identities = 112/212 (52%), Positives = 149/212 (70%), Gaps = 6/212 (2%)
 Frame = -2

Query: 618  RAGSKGNILKLIQQGVALGLQHSSIPLSFSIPCKSKFK--SDYEAIDTPQSSDNNVPYAV 445
            +AGSKGN+LKL+Q  + LGLQH+   LSF IP +      +  +A D  +S+   +P+AV
Sbjct: 784  KAGSKGNLLKLVQHSMCLGLQHALASLSFRIPHQLSCAGWNKQKADDATESAKRYIPHAV 843

Query: 444  VESSFLKGLDPVECFMHSVSSRSVSFADNAEVPGTIFKKLMFFMRDLYVAYDGTVRSSNG 265
            VE SFL GL+P+ECF+HSV+SR  SF+DNA++PGT+F+++MFFMRDL+ AYDGTVR++ G
Sbjct: 844  VEGSFLSGLNPIECFVHSVTSRDSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYG 903

Query: 264  NHLYQFSYGV----PKESSVQNNSNHELFVESTYDSVQSGDPVGSSAACSISEAAYSALD 97
            N L QFSY +    P  S  + N++  +          +G PVG  AAC+ISEAAYSALD
Sbjct: 904  NQLVQFSYNIDDMDPSGSVDEINNSDGI----------AGRPVGPLAACAISEAAYSALD 953

Query: 96   QPISTLESSPLLNLKNLLESSQKKTAVNQTAS 1
            QPIS LE SPLLNLKN+LE   K+ + +QT S
Sbjct: 954  QPISLLEKSPLLNLKNVLECGLKRNSAHQTMS 985