BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021614
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   263   5e-68
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   263   8e-68
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   262   1e-67
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   262   1e-67
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                259   1e-66

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  263 bits (673), Expect = 5e-68
 Identities = 134/336 (39%), Positives = 194/336 (57%)
 Frame = +3

Query: 114  MEDDKILGPDGFTVGFFKSNWGTLGDCFIKGNKYIFNHSYMPIGINCTIISLIPKSKDKT 293
            ++D K  G DGF   FFK +W  +     +G    F + +M   INCT ++LIPK  +  
Sbjct: 453  IDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAK 512

Query: 294  GPRNFRLIACCNVILKVITKIISTRLKTHMDKMVHQNQNAYVPERDIQDKLLLTHELMRE 473
              +++R IACC+ + K+I+KI++ RL+  + ++V   Q  ++PER I D +LL  EL+R 
Sbjct: 513  HAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRG 572

Query: 474  YIRRNLSAKWTLKIDIKKAYDTVSWTTVEAVLIKFGIPPKMVLWIMHCVSTPSYFVRLNG 653
            Y RR++S +  +K+DI+KAYD+V W  +E++L + G P   + WIM CV T SY + LNG
Sbjct: 573  YNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNG 632

Query: 654  TIEGFFPGKRGLRQGGPLSPYLFVLIMEVFHNLLKNEVDQKRMRLHPKCKEIKLTHLAFA 833
                 F  ++GLRQG PLSP+LF L ME     + N         HPKC+ IKLTHL FA
Sbjct: 633  IPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFA 692

Query: 834  DDILWFFKPTVDSSIHIAQVLNKFSTITGLTINIAKSSLVCGGKAIEGVSKLANRLGVEL 1013
            DD+L F +    S   I    N FS  +GL  +I KS +  GG   E   +LA+R+ + +
Sbjct: 693  DDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPI 752

Query: 1014 IKTSVTYLGIPMTDTKIKDIHCRPLIDKINTKINNW 1121
                  YLG+P+   K+    C+PLIDKI T+   W
Sbjct: 753  GSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGW 788


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  263 bits (671), Expect = 8e-68
 Identities = 131/339 (38%), Positives = 202/339 (59%)
 Frame = +3

Query: 120  DDKILGPDGFTVGFFKSNWGTLGDCFIKGNKYIFNHSYMPIGINCTIISLIPKSKDKTGP 299
            +DK  G DGF   FFK +WG++      G +  FN+S M   INC +++L+PK +  T  
Sbjct: 452  NDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRV 511

Query: 300  RNFRLIACCNVILKVITKIISTRLKTHMDKMVHQNQNAYVPERDIQDKLLLTHELMREYI 479
            + FR IACC VI K+I+K+++ R+K  + ++V++ Q+ ++P R I D +LL  EL+R Y 
Sbjct: 512  KEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYT 571

Query: 480  RRNLSAKWTLKIDIKKAYDTVSWTTVEAVLIKFGIPPKMVLWIMHCVSTPSYFVRLNGTI 659
            R+++S +  +K+DI+KAYD+V W+ +E +L +FG P + V WIM CVST SY V +NG  
Sbjct: 572  RKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIP 631

Query: 660  EGFFPGKRGLRQGGPLSPYLFVLIMEVFHNLLKNEVDQKRMRLHPKCKEIKLTHLAFADD 839
               F  ++GLRQG P+SP+LF L ME     L+          HPKC+ + +THL FADD
Sbjct: 632  TQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADD 691

Query: 840  ILWFFKPTVDSSIHIAQVLNKFSTITGLTINIAKSSLVCGGKAIEGVSKLANRLGVELIK 1019
            +L F +    S  H+     KFS  +GL  +  KS++   G   E   +LA+ + ++L +
Sbjct: 692  LLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGE 751

Query: 1020 TSVTYLGIPMTDTKIKDIHCRPLIDKINTKINNWHTRHL 1136
                YLG+P+T  K+    C+PL++ I  +   W  + L
Sbjct: 752  LPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLL 790


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  262 bits (670), Expect = 1e-67
 Identities = 134/343 (39%), Positives = 208/343 (60%)
 Frame = +3

Query: 108  FSMEDDKILGPDGFTVGFFKSNWGTLGDCFIKGNKYIFNHSYMPIGINCTIISLIPKSKD 287
            FSM +DK  GPDG+T  F+K  W  +G  FI   +  F   ++P GIN TI++LIPK K+
Sbjct: 351  FSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKE 410

Query: 288  KTGPRNFRLIACCNVILKVITKIISTRLKTHMDKMVHQNQNAYVPERDIQDKLLLTHELM 467
                +++R I+CCNV+ KVI+KII+ RLK  + K +  NQ+A+V +R + + +LL  E++
Sbjct: 411  AKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIV 470

Query: 468  REYIRRNLSAKWTLKIDIKKAYDTVSWTTVEAVLIKFGIPPKMVLWIMHCVSTPSYFVRL 647
            ++Y + ++S++  LKIDI KA+D+V W  +  VL     PP+   WI  C++T S+ V++
Sbjct: 471  KDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQV 530

Query: 648  NGTIEGFFPGKRGLRQGGPLSPYLFVLIMEVFHNLLKNEVDQKRMRLHPKCKEIKLTHLA 827
            NG + G F   R LRQG  LSPYLFV+ M+V   +L   V  ++   HPKC+ I LTHL+
Sbjct: 531  NGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLS 590

Query: 828  FADDILWFFKPTVDSSIHIAQVLNKFSTITGLTINIAKSSLVCGGKAIEGVSKLANRLGV 1007
            FADD++      V S   I +VL +F+  +GL I++ KS++   G       ++  +   
Sbjct: 591  FADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSF 650

Query: 1008 ELIKTSVTYLGIPMTDTKIKDIHCRPLIDKINTKINNWHTRHL 1136
            ++ K  V YLG+P+   ++    C PLI+++  KI  W +R L
Sbjct: 651  DVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFL 693


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  262 bits (669), Expect = 1e-67
 Identities = 130/343 (37%), Positives = 207/343 (60%)
 Frame = +3

Query: 108  FSMEDDKILGPDGFTVGFFKSNWGTLGDCFIKGNKYIFNHSYMPIGINCTIISLIPKSKD 287
            F M  DK  GPDG+T  FFK+ W  +GD F    +  F   ++P GIN TI++LIPK  +
Sbjct: 463  FRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTE 522

Query: 288  KTGPRNFRLIACCNVILKVITKIISTRLKTHMDKMVHQNQNAYVPERDIQDKLLLTHELM 467
                +++R I+CCNV+ KVI+KII+ RLK  + K +  NQ+A+V +R + + LLL  EL+
Sbjct: 523  AREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELV 582

Query: 468  REYIRRNLSAKWTLKIDIKKAYDTVSWTTVEAVLIKFGIPPKMVLWIMHCVSTPSYFVRL 647
            ++Y +  +S +  +KIDI KA+D+V W  +  V    G P + + WI  C++T S+ V++
Sbjct: 583  KDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQV 642

Query: 648  NGTIEGFFPGKRGLRQGGPLSPYLFVLIMEVFHNLLKNEVDQKRMRLHPKCKEIKLTHLA 827
            NG + G+F   RGLRQG  LSPYLFV+ M+V   +L      +    HPKCK + LTHL+
Sbjct: 643  NGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLS 702

Query: 828  FADDILWFFKPTVDSSIHIAQVLNKFSTITGLTINIAKSSLVCGGKAIEGVSKLANRLGV 1007
            FADD++      + S   I +V ++F+  +GL I++ KS++   G +    +++A+R   
Sbjct: 703  FADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPF 762

Query: 1008 ELIKTSVTYLGIPMTDTKIKDIHCRPLIDKINTKINNWHTRHL 1136
               +  V YLG+P+   ++    C PL++++  +I +W +R L
Sbjct: 763  SSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFL 805


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  259 bits (661), Expect = 1e-66
 Identities = 138/371 (37%), Positives = 212/371 (57%)
 Frame = +3

Query: 24   FPTKVCSQSRRTIDATS*YY*TRDQR*YFSMEDDKILGPDGFTVGFFKSNWGTLGDCFIK 203
            F      Q   T + TS      +Q+  F+M  +K  GPDG+T  FFK+ W   G  FI 
Sbjct: 12   FRCSATDQDMLTREVTS----EENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIA 67

Query: 204  GNKYIFNHSYMPIGINCTIISLIPKSKDKTGPRNFRLIACCNVILKVITKIISTRLKTHM 383
              K  F   ++P G+N TI++LIPK  + T  R++R I+CCNVI KVI+KII+ RLK  +
Sbjct: 68   AIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVML 127

Query: 384  DKMVHQNQNAYVPERDIQDKLLLTHELMREYIRRNLSAKWTLKIDIKKAYDTVSWTTVEA 563
               + QNQ+A+V ER + + +LL  EL+++Y + ++S +  +KIDI KA+D+V W  +  
Sbjct: 128  PTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLN 187

Query: 564  VLIKFGIPPKMVLWIMHCVSTPSYFVRLNGTIEGFFPGKRGLRQGGPLSPYLFVLIMEVF 743
             L     P     WI  C+ST ++ V++NG + GFF  KRGLRQG  LSPYLFV+ M V 
Sbjct: 188  TLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVL 247

Query: 744  HNLLKNEVDQKRMRLHPKCKEIKLTHLAFADDILWFFKPTVDSSIHIAQVLNKFSTITGL 923
             +++      + +  HPKCK++ LTHL FADD++ F      S   +  +  +F+  +GL
Sbjct: 248  SHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGL 307

Query: 924  TINIAKSSLVCGGKAIEGVSKLANRLGVELIKTSVTYLGIPMTDTKIKDIHCRPLIDKIN 1103
             I++ KS+L   G +    + + +       +  V YLG+P+   ++      PL+DK+ 
Sbjct: 308  HISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVR 367

Query: 1104 TKINNWHTRHL 1136
            +KI++W  R L
Sbjct: 368  SKISSWTARSL 378