BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020856
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    91   1e-16
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               84   1e-14
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    82   6e-14
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    82   6e-14
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   1e-13

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
 Frame = -3

Query: 471 AWNCQGLGGSSTIPAIKHLLKSGYPDIFLLSETKNKPSKMIRWCKQLKFSSYQFIDPVGI 292
           +WNCQGL    TI  +K + K  +PDI  L ETKN    + +    L +     ++P G 
Sbjct: 4   SWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEGR 63

Query: 291 SGGMAVFWNSKLLIQSITQFDFYFRMNIND---TISNSSWDLFFVYCNTDTIKRLTQFNH 121
           SGG+A+FW S L I+ +     Y   N+ D   +  N  W +  VY    T  R   + H
Sbjct: 64  SGGLAIFWKSHLEIEFL-----YADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEH 118

Query: 120 LSNIFHNYSSPFIVIGDFNDIANSSEKVGG---RPKSFQSMQN 1
           L++I    +  + +IGDFNDI ++ EK+GG    P SFQ  ++
Sbjct: 119 LNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEH 161


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
 Frame = -3

Query: 468 WNCQGLGGSSTIPAIKHLLKSGYPDIFLLSETKNKPSKMIRWCKQLKFSSYQFIDPVGIS 289
           WNCQGLG   T+  +K + +   PD+  LSETK +   +   C +L FS++  +  +G+S
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 288 GGMAVFWNSKLLI----QSITQFDFYFRMNINDTISNSSWDLFFVYCNTDTIKRLTQFNH 121
           GG+ V W   + I     S    D Y + N         ++L FVY + +   R   +  
Sbjct: 119 GGLVVLWKPSVHISVSFNSPNLVDCYVQSN------EVGFNLSFVYGHPNPSHRNNLWER 172

Query: 120 LSNIFHNYS-SPFIVIGDFNDIANSSEKVGGR 28
           L  +  N +  P+ ++GDFN++  + EK+GGR
Sbjct: 173 LERLAVNRNGQPWFILGDFNELLGNHEKIGGR 204


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
 Frame = -3

Query: 483 MLIWAWNCQGLGGSSTIPAIKHLLKSGYPDIFLLSETK--NKPSKMIRWCKQLKFSSYQF 310
           ++ W  NC+GLG ++T+  ++ L+KS  P +  LSETK  +K ++ + W   L FS    
Sbjct: 6   LVTWGRNCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMW--SLGFSGSFA 63

Query: 309 IDPVGISGGMAVFWNSKLLIQSITQFDFYFRMNINDTISNSSWDLFFVYCNTDTIKRLTQ 130
           +   G+SGG+A+FW +   + S+  F+ +F   +  T     W + FVY       R   
Sbjct: 64  VSCEGLSGGLALFWTTAYTV-SLRGFNSHFIDVLVSTEELPPWRISFVYGEPKRELRHFF 122

Query: 129 FNHLSNIFHNYSSPFIVIGDFNDIANSSEKVGGRPKSFQSMQN 1
           +N L  +   +  P++  GDFN++    E +G R +S   MQ+
Sbjct: 123 WNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQH 165


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
 Frame = -3

Query: 483 MLIWAWNCQGLGGSSTIPAIKHLLKSGYPDIFLLSETKNKPSKMIRWCKQLKFSSYQFID 304
           M +  WNCQGLG   T+  ++ + +  + D+  L ETK + +       ++ F     I 
Sbjct: 363 MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCIIS 422

Query: 303 PVGISGGMAVFWNSKLLIQSITQ----FDFYFRMNINDTISNSSWDLFFVYCNTDTIKRL 136
           P G+SGG+ V+W   L IQ I+      D Y          N ++ L  +Y +    +R 
Sbjct: 423 PRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVE------YKNFNFYLSCIYGHPIPSERH 476

Query: 135 TQFNHLSNIFHNYSSPFIVIGDFNDIANSSEKVGGRPKSFQSMQN 1
             +  L  +  + S P+++ GDFN+I N +EK GGR +S  S+QN
Sbjct: 477 HLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQN 521


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
 Frame = -3

Query: 483 MLIWAWNCQGL--GGSSTIPAIKHLLKSGYPDIFLLSETKNKPSKMIRWCKQLKFSSYQF 310
           M + AWNC+GL    S TIP +  L++   P I  LSETK+  S + +    L F +   
Sbjct: 1   MKVLAWNCRGLRSADSPTIPFLGWLVRQCLPQILFLSETKSDSSLISKLAMYLGFPNVAT 60

Query: 309 IDPVGISGGMAVFWNSKLLIQSITQFDFYFRMNINDTISNS--SWDLFFVYCNTDTIKRL 136
           +D +  +GG+A+FW++ + +        YF  NIND +      W+L  +Y +     R 
Sbjct: 61  VDSINNAGGLALFWSNDVNLDLKVSSTNYFACNINDLVDEDVYIWNLILLYGSPYLDNRG 120

Query: 135 TQFNHLSNIFHNYSSPFIVIGDFNDIANSSEKVGG 31
             +  +++         +++GDFN I   ++K+GG
Sbjct: 121 EVWERIADYISRNPLDSVIMGDFNQIEFLNQKMGG 155