BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020742
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       391   e-106
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]   362   6e-98
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     322   9e-86
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   312   9e-83
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   299   6e-79

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  391 bits (1004), Expect = e-106
 Identities = 203/335 (60%), Positives = 252/335 (75%), Gaps = 3/335 (0%)
 Frame = -3

Query: 1004 EMVRSMMSFSDLPISFWGHALETAAYILNLTPSKSVPITPIELWTGRKPSLRHFRIWGCP 825
            +MVRSMMS++ LP SFWG+ALETA +ILN  PSKSV  TP ELW GRK SLR+FRIWGCP
Sbjct: 614  DMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKSSLRYFRIWGCP 673

Query: 824  AHVLNKDADKLESRSEVRLFVGYPKGTKGGLFYSLKDQKIITSTNARFLEEDYIMNHKPM 645
            AHVL ++  KLE RS++ LFVGYPK ++GGLFY  ++ K+  STNA FLEED+  NH+P 
Sbjct: 674  AHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNATFLEEDHXRNHQPR 733

Query: 644  SKLVLEEI---RGEVPTNTTTIVQEEEPEIIPDNITNDTQEQVVPRRSGRVVRQPDRFMF 474
            SK+VL+E+     + P+++T +V +     I D  ++ +QE  VPRRSGRVV QP+R++ 
Sbjct: 734  SKIVLKEMFKNATDKPSSSTKVVDKAN---ISDQ-SHTSQELRVPRRSGRVVHQPNRYLG 789

Query: 473  LGESSDLISGEQDSDPRIYNEALKDKDAESLQEAMKSEMGSKDPNQVWELVEPPSGVKSI 294
            L E+  +I  +   DP  Y +A+ D D +   +AM  EM S   N VW LV+ PS VK I
Sbjct: 790  LVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLVDLPSDVKPI 849

Query: 293  GCKWVYKRKRGSDGKVETFKARLVAKGFTQKEGIDYEETFSPVAMLKSIRILLSIAAHLD 114
            GCKW+YKRKR   GKV+TFKARLVAKG+TQKEG+DYEETFSPVAMLKSIRILLSIA   +
Sbjct: 850  GCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILLSIATFYN 909

Query: 113  YEIWQMDVKTAFLNGSLEETIYMRQPDGFIEKGQE 9
            YEIWQMDVKTAFLNG+LEE+IYM QP+GFI + QE
Sbjct: 910  YEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQE 944


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score =  362 bits (930), Expect = 6e-98
 Identities = 190/333 (57%), Positives = 227/333 (68%), Gaps = 1/333 (0%)
 Frame = -3

Query: 1004 EMVRSMMSFSDLPISFWGHALETAAYILNLTPSKSVPITPIELWTGRKPSLRHFRIWGCP 825
            +M+RSMMS+  L  SFWG+AL+T  YILN+ PSKS+P TP+ELW GRKPSLRH RIWGCP
Sbjct: 419  DMMRSMMSYFSLLTSFWGYALQTVVYILNMVPSKSIPNTPLELWNGRKPSLRHIRIWGCP 478

Query: 824  AHVLNKDADKLESRSEVRLFVGYPKGTKGGLFYSLKDQKIITSTNARFLEEDYIMNHKPM 645
            AHVL     KLESRSEV +FVGYPKGT+G                          + KP 
Sbjct: 479  AHVLKGKTGKLESRSEVCMFVGYPKGTRG--------------------------DFKPR 512

Query: 644  SKLVLEEIRG-EVPTNTTTIVQEEEPEIIPDNITNDTQEQVVPRRSGRVVRQPDRFMFLG 468
            SK+VLEE+   E+    TT+V+ +  E    ++T        PR SGR +R P R+   G
Sbjct: 513  SKVVLEELLADEISPTPTTVVERQRKETTARDLTPPP-----PRCSGREIRLPIRYCENG 567

Query: 467  ESSDLISGEQDSDPRIYNEALKDKDAESLQEAMKSEMGSKDPNQVWELVEPPSGVKSIGC 288
            E+   ++   D D   +  A+ D D E+ QEAMK E+ S   N VWELV+ P G+K IGC
Sbjct: 568  EAQVAVTDGSDDDSLTFKMAMDDVDRETWQEAMKLEIESMYSNSVWELVDLPEGIKPIGC 627

Query: 287  KWVYKRKRGSDGKVETFKARLVAKGFTQKEGIDYEETFSPVAMLKSIRILLSIAAHLDYE 108
            KW+YKRKRG +GKVETFKARLVAKGFTQKEG+DYE+TFSPVAMLKSIRILLSIAA+ DYE
Sbjct: 628  KWIYKRKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVAMLKSIRILLSIAAYYDYE 687

Query: 107  IWQMDVKTAFLNGSLEETIYMRQPDGFIEKGQE 9
            IWQMDVKT FLNG LEETIYM Q +GF+ K QE
Sbjct: 688  IWQMDVKTTFLNGHLEETIYMVQSEGFVVKDQE 720


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  322 bits (825), Expect = 9e-86
 Identities = 168/329 (51%), Positives = 222/329 (67%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1004 EMVRSMMSFSDLPISFWGHALETAAYILNLTPSKSVPITPIELWTGRKPSLRHFRIWGCP 825
            +MVRSMMS SDLP+SFWG+ALETAA  LN  PSKSV  TP E+WTG+ PSL   +IWGC 
Sbjct: 609  DMVRSMMSQSDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCE 668

Query: 824  AHVLNKDADKLESRSEVRLFVGYPKGTKGGLFYSLKDQKIITSTNARFLEEDYIMNHKPM 645
            A+V    +DKL  +S+    VGYPK TKG  FY+ +  K+  + +  FLE++++      
Sbjct: 669  AYVKRLQSDKLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSG 728

Query: 644  SKLVLEEIRGEVPT-NTTTIVQEEEPEIIPDNITNDTQEQVVPRRSGRVVRQPDRFMFLG 468
             ++ LEE++    T + TT  Q+E+  + P  +     +   PRRS R  R PDR+    
Sbjct: 729  IRVHLEEVQETPETVSATTEPQQEDQSVAPPVV-----DTPAPRRSERSRRAPDRYTG-A 782

Query: 467  ESSDLISGEQDSDPRIYNEALKDKDAESLQEAMKSEMGSKDPNQVWELVEPPSGVKSIGC 288
            E  D++  + D +P+ Y EA+   D+     AMKSE+ S   NQVW LV+PP GVK+I C
Sbjct: 783  EQRDILLLDND-EPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIEC 841

Query: 287  KWVYKRKRGSDGKVETFKARLVAKGFTQKEGIDYEETFSPVAMLKSIRILLSIAAHLDYE 108
            KW++K+K   DG V  +KARLVAKGF Q +G+DY+ETFSPVAMLKSIRI+L+IAA+ DYE
Sbjct: 842  KWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYE 901

Query: 107  IWQMDVKTAFLNGSLEETIYMRQPDGFIE 21
            IWQMDVKTAFLNG+L E +YM QP GF++
Sbjct: 902  IWQMDVKTAFLNGNLSEDVYMIQPQGFVD 930


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  312 bits (799), Expect = 9e-83
 Identities = 163/329 (49%), Positives = 212/329 (64%), Gaps = 3/329 (0%)
 Frame = -3

Query: 1004 EMVRSMMSFSDLPISFWGHALETAAYILNLTPSKSVPITPIELWTGRKPSLRHFRIWGCP 825
            +MVRSMMS +DLP  FWG+ALET+A++LN  PSKSV  TP E+WTG+ P+L   +IWGC 
Sbjct: 253  DMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNLSFLKIWGCE 312

Query: 824  AHVLNKDADKLESRSEVRLFVGYPKGTKGGLFYSLKDQKIITSTNARFLEEDYIMNHKPM 645
            ++      DKL  +S+   FVGYPK TKG  FY   D K+    N  FLE +++      
Sbjct: 313  SYAKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAFLEREFLSKGTSG 372

Query: 644  SKLVLEEIR---GEVPTNTTTIVQEEEPEIIPDNITNDTQEQVVPRRSGRVVRQPDRFMF 474
            SK++LEE+R   G+VPT+      +EE ++    +      +   RRS R   +PDRF  
Sbjct: 373  SKVLLEEVREPQGDVPTS------QEEHQLDLRRVVEPILVEPEVRRSERSRHEPDRFRD 426

Query: 473  LGESSDLISGEQDSDPRIYNEALKDKDAESLQEAMKSEMGSKDPNQVWELVEPPSGVKSI 294
                   +   +  +P  Y EAL   D++   EA KSEM S   N+VW LV+ P GVK I
Sbjct: 427  WVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPI 486

Query: 293  GCKWVYKRKRGSDGKVETFKARLVAKGFTQKEGIDYEETFSPVAMLKSIRILLSIAAHLD 114
             CKW++K+K   DG ++ +KA LVAKG+ Q  GIDY+ET+SPVAMLKSIRILL+ AAH D
Sbjct: 487  ECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYD 546

Query: 113  YEIWQMDVKTAFLNGSLEETIYMRQPDGF 27
            YEIWQMDVKTAFLNG+LEE +YM QP+GF
Sbjct: 547  YEIWQMDVKTAFLNGNLEEHVYMTQPEGF 575


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  299 bits (766), Expect = 6e-79
 Identities = 160/337 (47%), Positives = 217/337 (64%), Gaps = 9/337 (2%)
 Frame = -3

Query: 1004 EMVRSMMSFSDLPISFWGHALETAAYILNLTPSKSVPITPIELWTGRKPSLRHFRIWGCP 825
            +MVRSMMS +DLP+SFWG+ALETA + +N  PSKS+  TP E+WTG++PSL   +IWGC 
Sbjct: 158  DMVRSMMSQTDLPLSFWGYALETAVFTVNRVPSKSMDKTPYEIWTGKRPSLSFLKIWGCE 217

Query: 824  AHVLNKDADKL--ESRSEVRLFVGYPKGTKGGLFYSLKDQKIITSTNARFLEEDYIMNHK 651
             +V    +DKL  +S+S+   FVGYPK TKG  FY+ ++ K+  + +  FLE+ +I    
Sbjct: 218  VYVKRLQSDKLTPKSKSDKCFFVGYPKETKGYYFYNREEGKVFVARHGVFLEKKFISRKD 277

Query: 650  PMSKLVLEEIRGEVPTNTTTIVQEEEPEI-----IPDNITNDTQEQVVPRRSGRVVRQPD 486
              S         E P N +T  Q ++ E      +   +     E    RRS R+ R P 
Sbjct: 278  SGSM--------ETPENASTSTQPQQAEQDVVQQVEQVVVEPVVEAPASRRSERIRRTPA 329

Query: 485  RFMFL--GESSDLISGEQDSDPRIYNEALKDKDAESLQEAMKSEMGSKDPNQVWELVEPP 312
            R+  L  G+   L+ G  + +P  Y EA+    +E    AMKS++ S   NQVW LV+P 
Sbjct: 330  RYALLTTGQCDILLLG--NDEPTTYEEAMVGPGSEKWLGAMKSKIESMHVNQVWNLVDPL 387

Query: 311  SGVKSIGCKWVYKRKRGSDGKVETFKARLVAKGFTQKEGIDYEETFSPVAMLKSIRILLS 132
              VK+I CKWV+K+K   DG V  +KARLVAKGF Q +G++Y+ETFSPVAMLKSIRI+L+
Sbjct: 388  DSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLA 447

Query: 131  IAAHLDYEIWQMDVKTAFLNGSLEETIYMRQPDGFIE 21
            IAA+ DYEIWQMDVKTAFL+G+L+E +YM QP GF++
Sbjct: 448  IAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVD 484