BLASTX nr result

ID: Aconitum21_contig00020572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020572
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   204   8e-51
emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]   198   3e-49
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   197   6e-49
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              194   8e-48

>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  213 bits (541), Expect = 2e-53
 Identities = 99/131 (75%), Positives = 113/131 (86%)
 Frame = +3

Query: 6   ERSDPGGVVAGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLY 185
           ER+DPGG+VAGSRQIYLTFPAESTFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTF++
Sbjct: 314 ERNDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVF 373

Query: 186 PETVKIILTKGNPHFVCGARVLVKPYREKSRIVDRKYTEKGESSLYYPSHYLDMEPEMQP 365
            ETVK IL+KGNPH VCGARVLVKPYREKSR+VDRKY EK +   +Y  H++D + E+  
Sbjct: 374 AETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHS 433

Query: 366 NPRLCDTSRLL 398
            PR+CD SRLL
Sbjct: 434 VPRVCDNSRLL 444


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  204 bits (518), Expect = 8e-51
 Identities = 95/131 (72%), Positives = 111/131 (84%)
 Frame = +3

Query: 6   ERSDPGGVVAGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLY 185
           ER+DPGG+VAGSRQIYLTFPAES FTE DVS YF  FGPVQDVRIPCQQKRMFGFVTF++
Sbjct: 340 ERNDPGGIVAGSRQIYLTFPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIF 399

Query: 186 PETVKIILTKGNPHFVCGARVLVKPYREKSRIVDRKYTEKGESSLYYPSHYLDMEPEMQP 365
            ETVK IL KGNPH+VCGARVLVKPYREKSR++DRK++EK +  +Y  SH++D + E+ P
Sbjct: 400 VETVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHP 459

Query: 366 NPRLCDTSRLL 398
            P + D SRLL
Sbjct: 460 MPTISDNSRLL 470


>emb|CAN64426.1| hypothetical protein VITISV_022456 [Vitis vinifera]
          Length = 556

 Score =  198 bits (504), Expect = 3e-49
 Identities = 97/132 (73%), Positives = 110/132 (83%)
 Frame = +3

Query: 3   NERSDPGGVVAGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFL 182
           +ERSDPG +V+GSRQIYLTFPAESTFTEEDVS+YF  FG V+DVRIPCQQKRMFGFVTF 
Sbjct: 301 SERSDPGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFD 360

Query: 183 YPETVKIILTKGNPHFVCGARVLVKPYREKSRIVDRKYTEKGESSLYYPSHYLDMEPEMQ 362
             +TVK IL KG+PH+VCGARVLVKPYREK R  DRKY+EK ESS+YYP  Y DM+ E+ 
Sbjct: 361 SSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYSEKFESSMYYPLQYADMDSELH 420

Query: 363 PNPRLCDTSRLL 398
             PR  +TSRLL
Sbjct: 421 MMPRGMETSRLL 432


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
           product [Vitis vinifera]
          Length = 544

 Score =  197 bits (502), Expect = 6e-49
 Identities = 97/132 (73%), Positives = 109/132 (82%)
 Frame = +3

Query: 3   NERSDPGGVVAGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFL 182
           +ERSDPG +V+GSRQIYLTFPAESTFTEEDVS+YF  FG V+DVRIPCQQKRMFGFVTF 
Sbjct: 301 SERSDPGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFD 360

Query: 183 YPETVKIILTKGNPHFVCGARVLVKPYREKSRIVDRKYTEKGESSLYYPSHYLDMEPEMQ 362
             +TVK IL KG+PH+VCGARVLVKPYREK R  DRKY EK ESS+YYP  Y DM+ E+ 
Sbjct: 361 SSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELH 420

Query: 363 PNPRLCDTSRLL 398
             PR  +TSRLL
Sbjct: 421 MMPRGMETSRLL 432


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/133 (69%), Positives = 109/133 (81%), Gaps = 2/133 (1%)
 Frame = +3

Query: 6   ERSDPGGVVAGSRQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLY 185
           ERSDPG +V  S+QIYLTFPA+STFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTF++
Sbjct: 289 ERSDPGAIVGSSKQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVF 348

Query: 186 PETVKIILTKGNPHFVCGARVLVKPYREK--SRIVDRKYTEKGESSLYYPSHYLDMEPEM 359
            ETVK ILTKGNPH++CGARVLVKPYREK  SR VDR+     +  +YY  H++D + E+
Sbjct: 349 AETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDEDSEL 403

Query: 360 QPNPRLCDTSRLL 398
           Q  PR+CD SRLL
Sbjct: 404 QSIPRVCDNSRLL 416


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