BLASTX nr result

ID: Aconitum21_contig00020509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020509
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   162   3e-38
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                154   9e-36
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   154   9e-36
emb|CAH67693.1| H0624F09.1 [Oryza sativa Indica Group] gi|903991...   154   9e-36
emb|CAD39395.2| OSJNBb0089K24.5 [Oryza sativa Japonica Group]         154   9e-36

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +1

Query: 16  DIPVVREYQSVF-EEITGLPPVREVNFRVDLIPGAAPISKPAYRLAPXXXXXXXXXXXXX 192
           D+P+VRE+Q VF EEI G+PP R+V F VDL+PG  PISK  YR+AP             
Sbjct: 556 DVPIVREFQDVFPEEIPGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEEL 615

Query: 193 XSRGLIQPSVSPWGASAIFVSKKDGTYRMCIDYRDLNKVTIRNKYPLPRIDDLLDQLRGA 372
             +G I+PS+SPWGA  +FV KKDG+ R+CIDYR+LN VT++NKYPLPRIDDL DQL+GA
Sbjct: 616 LDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDLFDQLQGA 675

Query: 373 GVFSK 387
           G+FSK
Sbjct: 676 GMFSK 680


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +1

Query: 10  ISDIPVVREYQSVF-EEITGLPPVREVNFRVDLIPGAAPISKPAYRLAPXXXXXXXXXXX 186
           + D+ +V E+  VF  EI+G+PP R V F +DL+PG APISK  YR+AP           
Sbjct: 522 LEDVSIVNEFMDVFPSEISGMPPARAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQ 581

Query: 187 XXXSRGLIQPSVSPWGASAIFVSKKDGTYRMCIDYRDLNKVTIRNKYPLPRIDDLLDQLR 366
               +G I+PS SPWGA  +FV KKDG+ R+CIDYR+LN VTI+NKYPLPRIDDL DQL 
Sbjct: 582 ELLDKGYIRPSASPWGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRIDDLFDQLN 641

Query: 367 GAGVFSK 387
           GA VFSK
Sbjct: 642 GASVFSK 648


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/129 (55%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = +1

Query: 4    PSISDIPVVREYQSVFE-EITGLPPVREVNFRVDLIPGAAPISKPAYRLAPXXXXXXXXX 180
            P +  +PVVR++  VF  ++ GLPP R+++F ++L PG  PIS P YR+AP         
Sbjct: 636  PPVESVPVVRDFIDVFPTDLPGLPPERDIDFPIELEPGTRPISIPPYRMAPAELKELSVQ 695

Query: 181  XXXXXSRGLIQPSVSPWGASAIFVSKKDGTYRMCIDYRDLNKVTIRNKYPLPRIDDLLDQ 360
                  +G I+PSVSPWGA  +FV KKDGT RMCIDYR LNKVT++N+YPLPRIDDL DQ
Sbjct: 696  LQDLLGKGFIRPSVSPWGAPVLFVKKKDGTMRMCIDYRQLNKVTVKNRYPLPRIDDLFDQ 755

Query: 361  LRGAGVFSK 387
            L+GA VFSK
Sbjct: 756  LQGASVFSK 764


>emb|CAH67693.1| H0624F09.1 [Oryza sativa Indica Group] gi|90399167|emb|CAJ86096.1|
            H0818H01.18 [Oryza sativa Indica Group]
          Length = 1805

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/126 (57%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
 Frame = +1

Query: 13   SDIPVVREYQSVF-EEITGLPPVREVNFRVDLIPGAAPISKPAYRLAPXXXXXXXXXXXX 189
            S+IP+VRE++ VF EE+ G+PP RE+ FR+DL+PG  P+ K  YR+A             
Sbjct: 831  SEIPIVREFEDVFPEELPGMPPKREIEFRIDLVPGTTPLHKRPYRMAANELAEVKKQLEE 890

Query: 190  XXSRGLIQPSVSPWGASAIFVSKKDGTYRMCIDYRDLNKVTIRNKYPLPRIDDLLDQLRG 369
               +G I+PS SPWGA  IFV KKD T RMC+DYR LN+VTI+NKYPLPRIDDL DQL+G
Sbjct: 891  LKEKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKG 950

Query: 370  AGVFSK 387
            A VFSK
Sbjct: 951  ATVFSK 956


>emb|CAD39395.2| OSJNBb0089K24.5 [Oryza sativa Japonica Group]
          Length = 1365

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/128 (57%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +1

Query: 7   SISDIPVVREYQSVF-EEITGLPPVREVNFRVDLIPGAAPISKPAYRLAPXXXXXXXXXX 183
           S+ +IP+V+EY  VF EE+ G+PP R++ FR+DL+PG APISK  YR+A           
Sbjct: 468 SMEEIPIVKEYPDVFPEELPGMPPKRDIEFRIDLVPGTAPISKRPYRMAANELAEVKKQL 527

Query: 184 XXXXSRGLIQPSVSPWGASAIFVSKKDGTYRMCIDYRDLNKVTIRNKYPLPRIDDLLDQL 363
                +G I+PS SPWGA  IFV KKD T RMC+DYR LN+VTI+NKYPLPRIDDL +QL
Sbjct: 528 EKLKGKGHIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFNQL 587

Query: 364 RGAGVFSK 387
           +GA VFSK
Sbjct: 588 KGATVFSK 595


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