BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020245
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   130   3e-28
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,...   130   4e-28
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19
ref|NP_198189.1| pentatricopeptide repeat-containing protein [Ar...    86   8e-15
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar...    86   8e-15

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score =  130 bits (327), Expect = 3e-28
 Identities = 88/244 (36%), Positives = 126/244 (51%), Gaps = 17/244 (6%)
 Frame = +3

Query: 48  PVLPRNTNSTLRYLSSHIS--PPA-------TSERQLLTLLHSTTPDHWDSPQLLHXXXX 200
           P  P N +S LR+LS+     PPA       +S   L+  L  TT + W+  +L      
Sbjct: 20  PQTPPNLSSLLRHLSAEPDHHPPAPPPQNDSSSVVNLVVELLQTTDNDWNEDKLHQLLFP 79

Query: 201 XXXXXXXXXXXXXXXX-----AKALKFLQWAQXXXXXXXXXXXXXXYQALFELACREQHS 365
                                AKALKF  W Q               +A+FE A RE +S
Sbjct: 80  TTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNS 139

Query: 366 CLKLLEILQISRAHSVPLTADSASILIRHFAKAGMVEESVGVFNEIDPLVKNTQLCNTML 545
             KLL++ + S++H +PL+ ++A++LIR F +A MV+ES  V+NE+ P  + T + N ++
Sbjct: 140 HNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILI 199

Query: 546 DAFYRMGRVLDARRVLDEMLQPESRFPPDDCTVFIVFDVLVKRDQV---VNGREAIELVK 716
           D  +R GRV DA  +LDEMLQP++ FPP+  T  IVF  L KRD+V   V+  E + LV 
Sbjct: 200 DVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVS 259

Query: 717 KLGE 728
           K  E
Sbjct: 260 KFAE 263


>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 346

 Score =  130 bits (326), Expect = 4e-28
 Identities = 71/162 (43%), Positives = 106/162 (65%), Gaps = 2/162 (1%)
 Frame = +3

Query: 249 AKALKFLQWAQXXXXXXXXXXXXXXYQALFELACREQHSCLKLLEILQISRAHSVPLTAD 428
           ++ALKFL++ Q              +QA+FELA RE  S   L E+ ++S+  ++PLT +
Sbjct: 106 SQALKFLKYLQNNFPTSNTQHLSSTFQAIFELASRENDSRTNLYELYKVSKEWNIPLTIN 165

Query: 429 SASILIRHFAKAGMVEESVGVFNEIDPLVKNTQLCNTMLDAFYRMGRVLDARRVLDEMLQ 608
           SA++L+R F + G+VE+S  +FNE++  +KNT + N M+D   R GRV DA +VLDEMLQ
Sbjct: 166 SATLLLRFFGRIGLVEKSFILFNELEHCIKNTHVRNLMVDLLLRDGRVDDAFKVLDEMLQ 225

Query: 609 PESRFP--PDDCTVFIVFDVLVKRDQVVNGREAIELVKKLGE 728
           P S F   PDD T  I+F  L+KR+++V+  E +E+V KLG+
Sbjct: 226 PGSEFDLRPDDVTGDIIFTWLMKREKLVSPEEIVEVVLKLGK 267


>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  101 bits (251), Expect = 2e-19
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
 Frame = +3

Query: 126 QLLTLLHSTTPDHWDSPQLLHXXXXXXXXXXXXXXXXXXXXAKALKFLQWAQXXXXXXXX 305
           QL  LL + +P    SP+L +                    ++ALKFL + Q        
Sbjct: 67  QLNQLLFTDSPPSSSSPRLFYQITRRLPSS-----------SQALKFLNYLQNNSPSSPD 115

Query: 306 XXXXXXY--QALFELACREQHSCLKLLEILQISRAHSVPLTADSASILIRHFAKAGMVEE 479
                 Y  QA+FELA  E  S   L  + + S+  ++PLT ++AS L+R   ++ +VEE
Sbjct: 116 TQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEE 175

Query: 480 SVGVFNEIDPLVKNTQLCNTMLDAFYRMGRVLDARRVLDEMLQ--PESRFPPDDCTVFIV 653
           S+ +FN++DP VKNT L N  L    R GRV DA +V+DEM +   +S   P+D T  I+
Sbjct: 176 SLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDIL 235

Query: 654 FDVLVKR---DQVVNGREAIELVKKLGE 728
           F  L+KR   +++++  E + LV K GE
Sbjct: 236 FSFLLKRERNEELLSEDEIVNLVLKFGE 263


>ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|9502152|gb|AAF88005.1| similar to a large family of
           Arabidopsis thaliana salt inducible protein-like
           proteins; contains similarity to Pfam family PF01535
           (Domain of unknown function), score=340.5, E=1.9e-98,
           N=2 [Arabidopsis thaliana] gi|332006410|gb|AED93793.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 727

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 50/131 (38%), Positives = 79/131 (60%)
 Frame = +3

Query: 327 QALFELACREQHSCLKLLEILQISRAHSVPLTADSASILIRHFAKAGMVEESVGVFNEID 506
           Q++ E A  E     KLL + +I++  ++PLT  +  +LIR F + GMV +SV V+  +D
Sbjct: 120 QSVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLD 179

Query: 507 PLVKNTQLCNTMLDAFYRMGRVLDARRVLDEMLQPESRFPPDDCTVFIVFDVLVKRDQVV 686
             +KN+Q+ N ++D   R G V DA +VLDEMLQ ES FPP+  T  IV    V +++++
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHE-VWKERLL 238

Query: 687 NGREAIELVKK 719
              + I L+ +
Sbjct: 239 TEEKIIALISR 249


>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
           to Pfam family PF01535 (Domain of unknown function),
           score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
           gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
           [Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
           At5g28460/F21B23_120 [Arabidopsis thaliana]
           gi|332006418|gb|AED93801.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 766

 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 50/131 (38%), Positives = 79/131 (60%)
 Frame = +3

Query: 327 QALFELACREQHSCLKLLEILQISRAHSVPLTADSASILIRHFAKAGMVEESVGVFNEID 506
           Q++ E A  E     KLL + +I++  ++PLT  +  +LIR F + GMV +SV V+  +D
Sbjct: 120 QSVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLD 179

Query: 507 PLVKNTQLCNTMLDAFYRMGRVLDARRVLDEMLQPESRFPPDDCTVFIVFDVLVKRDQVV 686
             +KN+Q+ N ++D   R G V DA +VLDEMLQ ES FPP+  T  IV    V +++++
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHE-VWKERLL 238

Query: 687 NGREAIELVKK 719
              + I L+ +
Sbjct: 239 TEEKIIALISR 249