BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00020016
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   140   1e-31
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   137   7e-31
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   128   6e-28
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...   124   6e-27
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   124   6e-27

>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/151 (47%), Positives = 100/151 (66%)
 Frame = +1

Query: 16  RPTCQICGKYGHIAIDCYHRMNFAYQGKIPSQKLHAMAAEKIAMDTFNPTQWYMDSGATN 195
           +P CQ+CGKYGHIAI+CYHR +  YQ   P+   H +AA      T     WYMD+GAT+
Sbjct: 253 KPQCQVCGKYGHIAINCYHRFDQTYQ---PTMNNH-LAAMVATPSTVGDESWYMDTGATH 308

Query: 196 HLTADLGNLAVHSEYNGNDKVLVGNGQGLSISNTGNTFLRTSPSTKLLLKDILHVPKIAK 375
           HLT +L  L  H+ + G+DKV+VGNG  L+ISN G++ + +S S  L LK+ILHVP++  
Sbjct: 309 HLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTI-SSVSRSLNLKNILHVPQLTT 367

Query: 376 NLVSVQKLASDNDCSLTFTSKNATVKDNKSE 468
           NL+SV +L +DN+ ++ F +    VKD  S+
Sbjct: 368 NLISVNRLCTDNNVTVEFFTNGFVVKDQASK 398


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/149 (46%), Positives = 90/149 (60%)
 Frame = +1

Query: 13  SRPTCQICGKYGHIAIDCYHRMNFAYQGKIPSQKLHAMAAEKIAMDTFNPTQWYMDSGAT 192
           +RP CQICGK GH AIDC+HR +++YQG+ P Q L AM AE  A  TF+   WYMDSGA 
Sbjct: 271 NRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAETNA--TFDHQVWYMDSGAN 328

Query: 193 NHLTADLGNLAVHSEYNGNDKVLVGNGQGLSISNTGNTFLRTSPSTKLLLKDILHVPKIA 372
            H+T+D  NL     +  ++ V VGNG GL + NTG+T      S    L  ILH P+ A
Sbjct: 329 AHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGSTTFNFGQS-NFHLNKILHCPQAA 387

Query: 373 KNLVSVQKLASDNDCSLTFTSKNATVKDN 459
            NL+S+ +   DN+C    T+    VK+N
Sbjct: 388 TNLISINQFCLDNNCYFILTANGFVVKEN 416


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/152 (40%), Positives = 94/152 (61%)
 Frame = +1

Query: 13  SRPTCQICGKYGHIAIDCYHRMNFAYQGKIPSQKLHAMAAEKIAMDTFNPTQWYMDSGAT 192
           SRP CQ+C + GH A++C++R +  Y   +P Q+    +A   A    +   WY D+GAT
Sbjct: 278 SRPRCQVCSRVGHTALNCWYRFDENY---VPDQR----SANSAAHQNGSNVPWYTDTGAT 330

Query: 193 NHLTADLGNLAVHSEYNGNDKVLVGNGQGLSISNTGNTFLRTSPSTKLLLKDILHVPKIA 372
           +H+T DL  L +H +Y G D+++  NG G++ISN GN  + TS S  L L+ +LHVP   
Sbjct: 331 DHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTS-SRSLHLRSVLHVPSTH 389

Query: 373 KNLVSVQKLASDNDCSLTFTSKNATVKDNKSE 468
           KNL+SV +L +DND  + F S +  +KD +++
Sbjct: 390 KNLISVHRLTNDNDVFIEFHSSHFLIKDRQTK 421


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1202

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/148 (42%), Positives = 89/148 (60%)
 Frame = +1

Query: 13  SRPTCQICGKYGHIAIDCYHRMNFAYQGKIPSQKLHAMAAEKIAMDTFNPTQWYMDSGAT 192
           +RP CQ+C K GH+A DC+HR + +Y   +P +KL   A     +DT     WY+D+GAT
Sbjct: 277 TRPVCQVCHKRGHVASDCWHRYDDSY---VPDEKLGGAATYAYGIDT----NWYVDTGAT 329

Query: 193 NHLTADLGNLAVHSEYNGNDKVLVGNGQGLSISNTGNTFLRTSPSTKLLLKDILHVPKIA 372
           +H+T  L  L     Y G D++   +G+G+SI + G+  + T PS  L LK++LHVP+ A
Sbjct: 330 DHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIVPT-PSRPLHLKNVLHVPEAA 388

Query: 373 KNLVSVQKLASDNDCSLTFTSKNATVKD 456
           KNLVSV KL +DN   L    K   +KD
Sbjct: 389 KNLVSVHKLVADNYAFLEIHGKYFLIKD 416


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31433472|gb|AAP54977.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1031

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/148 (42%), Positives = 89/148 (60%)
 Frame = +1

Query: 13  SRPTCQICGKYGHIAIDCYHRMNFAYQGKIPSQKLHAMAAEKIAMDTFNPTQWYMDSGAT 192
           +RP CQ+C K GH+A DC+HR + +Y   +P +KL   A     +DT     WY+D+GAT
Sbjct: 277 TRPVCQVCHKRGHVASDCWHRYDDSY---VPDEKLGGAATYAYGVDT----NWYVDTGAT 329

Query: 193 NHLTADLGNLAVHSEYNGNDKVLVGNGQGLSISNTGNTFLRTSPSTKLLLKDILHVPKIA 372
           +H+T  L  L     Y G D++   +G+G+SI + G+  + T PS  L LK++LHVP+ A
Sbjct: 330 DHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIVPT-PSRPLHLKNVLHVPEAA 388

Query: 373 KNLVSVQKLASDNDCSLTFTSKNATVKD 456
           KNLVSV KL +DN   L    K   +KD
Sbjct: 389 KNLVSVHKLVADNYAFLEIHGKYFLIKD 416