BLASTX nr result

ID: Aconitum21_contig00019978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019978
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    72   6e-11
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    66   3e-09
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002319703.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
dbj|BAD16922.1| zinc finger -like [Oryza sativa Japonica Group] ...    59   5e-07

>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299 TMSICPFDLTYDIDLALTYLPXXXXXXXXXXXXXXXXXXXLELIDSLVADLPTVSATG-- 126
           T S C  D+++D+D AL   P                       DSLVAD+PTV++T   
Sbjct: 11  TFSTCLIDVSFDMDEALALPPNFGHQISES--------------DSLVADMPTVTSTDDH 56

Query: 125 -VCMICMEELEGCEAGAKQMPCNHAFHGGCIVRWLSEYNSCP 3
            VC ICME  +      KQ+PC H +H  CI  WLS  NSCP
Sbjct: 57  DVCSICMEGFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCP 98


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/92 (36%), Positives = 46/92 (50%)
 Frame = -3

Query: 278 DLTYDIDLALTYLPXXXXXXXXXXXXXXXXXXXLELIDSLVADLPTVSATGVCMICMEEL 99
           DL +D+DLA+T +                         S+V+ +PTV+A   C +C E  
Sbjct: 17  DLCFDLDLAITAVDDTSEISKST---------------SMVSTMPTVTAVDACTVCREGF 61

Query: 98  EGCEAGAKQMPCNHAFHGGCIVRWLSEYNSCP 3
           +  E G KQ+PC H +H GCI  WLS  NSCP
Sbjct: 62  QSGEGG-KQLPCGHFYHAGCIASWLSLRNSCP 92


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/92 (36%), Positives = 46/92 (50%)
 Frame = -3

Query: 278 DLTYDIDLALTYLPXXXXXXXXXXXXXXXXXXXLELIDSLVADLPTVSATGVCMICMEEL 99
           DL +D+DLA+T +                         S+V+ +PTV+A   C +C E  
Sbjct: 83  DLCFDLDLAITAVDDTSEISKST---------------SMVSTMPTVTAVDACTVCREGF 127

Query: 98  EGCEAGAKQMPCNHAFHGGCIVRWLSEYNSCP 3
           +  E G KQ+PC H +H GCI  WLS  NSCP
Sbjct: 128 QSGEGG-KQLPCGHFYHAGCIASWLSLRNSCP 158


>ref|XP_002319703.1| predicted protein [Populus trichocarpa] gi|222858079|gb|EEE95626.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = -3

Query: 158 VADLPTVSATG--VCMICMEELE-GCEAGAKQMPCNHAFHGGCIVRWLSEYNSCP 3
           V  +PTVS T    C +C+EE + GCEA  K+MPC H FHG CIV WL  ++SCP
Sbjct: 211 VKAMPTVSITQNLQCSVCLEEFDIGCEA--KEMPCKHKFHGECIVPWLELHSSCP 263


>dbj|BAD16922.1| zinc finger -like [Oryza sativa Japonica Group]
           gi|46806079|dbj|BAD17327.1| zinc finger -like [Oryza
           sativa Japonica Group]
          Length = 340

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
 Frame = -3

Query: 164 SLVADLPTVSATGV-------CMICMEELEGCEAGAKQMPCNHAFHGGCIVRWLSEYNSC 6
           S +  LPTV  TG        C +C E+ E  EA A+QMPC H +H  CIV WL  +NSC
Sbjct: 178 SAIDSLPTVQITGAHLSDGSQCPVCKEDFELGEA-ARQMPCKHVYHSDCIVPWLRLHNSC 236

Query: 5   P 3
           P
Sbjct: 237 P 237


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