BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019950
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   138   9e-31
gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi...   137   2e-30
gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi...   135   5e-30
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...   135   5e-30
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...   135   8e-30

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  138 bits (347), Expect = 9e-31
 Identities = 70/184 (38%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
 Frame = -1

Query: 622  HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
            HW RW DL   K +GGLGF++L  F  ALL K  W +++ P SL+A++ K +YF     +
Sbjct: 1124 HWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFM 1183

Query: 442  NASLGSRPSWAWKGILLGLKIIKNGFKWSIGDFNLINIRSDPWIPRLTSFKPHFCLDNNV 263
             A LGS PS+ W+  L G ++++ G +W IGD   + +  DPW+P L SF+P       +
Sbjct: 1184 EAELGSSPSYLWRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPSFRPILRQGAPL 1243

Query: 262  H-KVSDLTIRN-NWNNVLVDKCFDNDTASTIKQIYILRNTQSNQPIWHYSKSGRYSVKSR 89
              +VSDL   N  WN   ++  F +D    I  I +    + +  +W+Y K+GRY+VKS 
Sbjct: 1244 FLRVSDLLHNNGGWNMEALNYWFTDDECEAISSITVGATRRPDVYMWNYCKNGRYTVKSG 1303

Query: 88   YKVA 77
            Y +A
Sbjct: 1304 YWLA 1307


>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
          Length = 398

 Score =  137 bits (345), Expect = 2e-30
 Identities = 75/210 (35%), Positives = 118/210 (56%), Gaps = 3/210 (1%)
 Frame = -1

Query: 622 HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
           HW  W+ L+  K  GGLGF++L+ F  A+LA+  W ++ NP +L A++ K +Y+ ++ +L
Sbjct: 33  HWLSWEKLTMSKENGGLGFRDLHLFNIAMLARQAWRLLTNPGTLCARVLKAKYYPHTDVL 92

Query: 442 NASLGSRPSWAWKGILLGLKIIKNGFKWSIGDFNLINIRSDPWIPRLTSFKPHFCLDNNV 263
           ++S     S++W+ IL G++++K G  W +GD N + I  DPWIPR ++ KP      ++
Sbjct: 93  HSSAKDGISYSWRSILKGVELLKEGLIWRVGDVNSLKIWKDPWIPRSSTRKPITPRAGSI 152

Query: 262 -HKVSDL--TIRNNWNNVLVDKCFDNDTASTIKQIYILRNTQSNQPIWHYSKSGRYSVKS 92
             KVS+L   +   W+  L+D  F N  A  IK+I  L +   +   W Y   G +SVKS
Sbjct: 153 LTKVSELIDPVLGEWDEALIDDNFWNVDAEEIKKI-PLHDGVDDWAAWRYDPKGVFSVKS 211

Query: 91  RYKVAFDMYKNGFFNSKARGSTSKNGF*YG 2
            YKVA      G      R ++S +G  YG
Sbjct: 212 AYKVAVRKRDMG----SGRDASSSSGSVYG 237


>gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
          Length = 754

 Score =  135 bits (341), Expect = 5e-30
 Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
 Frame = -1

Query: 622  HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
            HW  W+ L+ PK  GGLGF++   F  ALLA+  W +IVNP SL A++ K +YF N +L+
Sbjct: 510  HWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLV 569

Query: 442  NASLGSRPSWAWKGILLGLKIIKNGFKWSIGDFNLINIRSDPWIPRLTSFKPHFCLDN-N 266
            + S G   S  WK I  GL ++K G  W IG+   + I  DPW+PR  S +P     N  
Sbjct: 570  DTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPITRKGNCR 629

Query: 265  VHKVSDLTIRNN-WNNVLVDKCFDNDTASTIKQIYILRNTQSNQPIWHYSKSGRYSVKSR 89
            +  VSDL   N  W+   V++ F    A TI  I +    + +   WH  K G++SV+S 
Sbjct: 630  LKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSRQEDDFVAWHPDKHGKFSVRSA 689

Query: 88   YKVAFDMYKNGFFNSKARGSTSKNG 14
            Y +A ++      N +   S+S  G
Sbjct: 690  YGLACNL-----VNMETSSSSSSAG 709


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score =  135 bits (341), Expect = 5e-30
 Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
 Frame = -1

Query: 622  HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
            HW  W+ L+ PK  GGLGF++   F  ALLA+  W +IVNP SL A++ K +YF N +L+
Sbjct: 1540 HWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLV 1599

Query: 442  NASLGSRPSWAWKGILLGLKIIKNGFKWSIGDFNLINIRSDPWIPRLTSFKPHFCLDN-N 266
            + S G   S  WK I  GL ++K G  W IG+   + I  DPW+PR  S +P     N  
Sbjct: 1600 DTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPITRKGNCR 1659

Query: 265  VHKVSDLTIRNN-WNNVLVDKCFDNDTASTIKQIYILRNTQSNQPIWHYSKSGRYSVKSR 89
            +  VSDL   N  W+   V++ F    A TI  I +    + +   WH  K G++SV+S 
Sbjct: 1660 LKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSRQEDDFVAWHPDKHGKFSVRSA 1719

Query: 88   YKVAFDMYKNGFFNSKARGSTSKNG 14
            Y +A ++      N +   S+S  G
Sbjct: 1720 YGLACNL-----VNMETSSSSSSAG 1739



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 42/92 (45%), Positives = 57/92 (61%)
 Frame = -1

Query: 622  HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
            HW  W+ L+ PK  GGLGF++   F  ALLA+  W +IVNP SL A++ K +YF N +L+
Sbjct: 842  HWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLV 901

Query: 442  NASLGSRPSWAWKGILLGLKIIKNGFKWSIGD 347
            + S G   S  WK I  GL ++K G  W IG+
Sbjct: 902  DTSFGGNASPVWKAIEYGLSLLKEGIIWRIGN 933


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31433076|gb|AAP54636.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score =  135 bits (339), Expect = 8e-30
 Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
 Frame = -1

Query: 622 HWSRWDDLSTPKFEGGLGFKNLYCFYAALLAKNCWNIIVNPCSLLAKIFKGRYFVNSTLL 443
           HW  WD L+ PK  GGLGF++ + F  ALLA+  W +I  P SL A++ K +YF + +L+
Sbjct: 247 HWKAWDSLTKPKSLGGLGFRDYWLFNQALLARQAWRLITYPDSLCARVLKAKYFPHGSLI 306

Query: 442 NASLGSRPSWAWKGILLGLKIIKNGFKWSIGDFNLINIRSDPWIPRLTSFKPHFCLDN-N 266
           + S GS  S AW+ I  GL ++K G  W +G+ N I I  DPW+PR  S +P     N  
Sbjct: 307 DTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCR 366

Query: 265 VHKVSDL-TIRNNWNNVLVDKCFDNDTASTIKQIYILRNTQSNQPIWHYSKSGRYSVKSR 89
           +  VSDL T   +W+   + + F N  A  I  I I   ++ +   WH  K+G +SV+S 
Sbjct: 367 LKWVSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSA 426

Query: 88  YKVA 77
           Y++A
Sbjct: 427 YRLA 430