BLASTX nr result

ID: Aconitum21_contig00019927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019927
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   154   9e-36
ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group] g...   153   2e-35
ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [S...   153   2e-35
ref|NP_001131695.1| uncharacterized protein LOC100193056 [Zea ma...   149   2e-34

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/113 (65%), Positives = 83/113 (73%), Gaps = 2/113 (1%)
 Frame = -1

Query: 510 KMEFCPTCGNMLQFEGRGASHKARLFCPTCPYVCEIESK--IKRRQHLVTKVVEPIFSGA 337
           +MEFCPTCGN LQ+E       AR FCPTCPYVC IE+K  IKR+Q LV K +EPIFS  
Sbjct: 64  QMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFS-K 122

Query: 336 DAMKNAAKTEASCPRCNFQQAYYQQLQMRSADEPMSTFYQCCNENCEHIWRED 178
           D MKN   T+A+CP CNF +A +QQLQ RSADEPMSTFY C NENC   WRED
Sbjct: 123 DDMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
 Frame = -1

Query: 507 MEFCPTCGNMLQFEGRGASHKARLFCPTCPYVCEIESK--IKRRQHLVTKVVEPIFSGAD 334
           MEFCPTCGN LQ+E       AR FCPTCPYVC IE+K  IKR+Q LV K +EPIFS  D
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFS-KD 59

Query: 333 AMKNAAKTEASCPRCNFQQAYYQQLQMRSADEPMSTFYQCCNENCEHIWRED 178
            MKN   T+A+CP CNF +A +QQLQ RSADEPMSTFY C NENC   WRED
Sbjct: 60  DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111


>ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group]
           gi|50251233|dbj|BAD27819.1| putative DNA-directed RNA
           polymerase III [Oryza sativa Japonica Group]
           gi|50251924|dbj|BAD27861.1| putative DNA-directed RNA
           polymerase II [Oryza sativa Japonica Group]
           gi|113537239|dbj|BAF09622.1| Os02g0672700 [Oryza sativa
           Japonica Group] gi|215708708|dbj|BAG93977.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765354|dbj|BAG87051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 110

 Score =  153 bits (386), Expect = 2e-35
 Identities = 65/110 (59%), Positives = 83/110 (75%)
 Frame = -1

Query: 507 MEFCPTCGNMLQFEGRGASHKARLFCPTCPYVCEIESKIKRRQHLVTKVVEPIFSGADAM 328
           MEFCP CG +LQ +     ++ R +CPTCPYVC +++KI ++  LV K VEPIFS +DAM
Sbjct: 1   MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKNKIVKKARLVKKEVEPIFSDSDAM 60

Query: 327 KNAAKTEASCPRCNFQQAYYQQLQMRSADEPMSTFYQCCNENCEHIWRED 178
           KNA KT  +CPRC   +AYY+Q+Q+RSADEPMSTFY+CC E C+  WRED
Sbjct: 61  KNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 110


>ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [Sorghum bicolor]
           gi|241934323|gb|EES07468.1| hypothetical protein
           SORBIDRAFT_04g032090 [Sorghum bicolor]
          Length = 166

 Score =  153 bits (386), Expect = 2e-35
 Identities = 66/110 (60%), Positives = 83/110 (75%)
 Frame = -1

Query: 507 MEFCPTCGNMLQFEGRGASHKARLFCPTCPYVCEIESKIKRRQHLVTKVVEPIFSGADAM 328
           MEFCP CG +LQ +   ASH+ RLFC  CPYVC I++KI ++  LV K VEPIFS AD M
Sbjct: 57  MEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQNKIVKKARLVKKEVEPIFSTADEM 116

Query: 327 KNAAKTEASCPRCNFQQAYYQQLQMRSADEPMSTFYQCCNENCEHIWRED 178
           K+A KT  +C RCN  +AY++Q+Q+RSADEPM+T Y+CC E C+H WRED
Sbjct: 117 KSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 166


>ref|NP_001131695.1| uncharacterized protein LOC100193056 [Zea mays]
           gi|194692264|gb|ACF80216.1| unknown [Zea mays]
           gi|195653763|gb|ACG46349.1| hypothetical protein [Zea
           mays] gi|413923417|gb|AFW63349.1| hypothetical protein
           ZEAMMB73_646152 [Zea mays]
          Length = 110

 Score =  149 bits (376), Expect = 2e-34
 Identities = 65/110 (59%), Positives = 81/110 (73%)
 Frame = -1

Query: 507 MEFCPTCGNMLQFEGRGASHKARLFCPTCPYVCEIESKIKRRQHLVTKVVEPIFSGADAM 328
           MEFCP CG +LQ +    SH+ RLFCP CPYVC I +KI ++  LV K VEPI S AD M
Sbjct: 1   MEFCPVCGILLQIDPGTGSHRLRLFCPVCPYVCPILNKIVKKARLVKKEVEPISSTADEM 60

Query: 327 KNAAKTEASCPRCNFQQAYYQQLQMRSADEPMSTFYQCCNENCEHIWRED 178
           K+A KT  +C RCN  +AY++Q+Q+RSADEPM+T Y+CC E C+H WRED
Sbjct: 61  KSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 110


Top