BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019907
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    53   2e-09
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    52   3e-09
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    46   9e-09
gb|ABN08012.1| RNA-directed DNA polymerase , putative [Medicago ...    48   2e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    42   3e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 23/46 (50%), Positives = 38/46 (82%), Gaps = 3/46 (6%)
 Frame = -3

Query: 297 SIKLDISQAYDSLDWSFLLNVLRQFG---TFLHWIKVILDNSYISI 169
           ++K+DI++A+D+LDW+FLL VL++FG    F+HWI VIL ++ +S+
Sbjct: 584 ALKVDIAKAFDTLDWNFLLAVLQRFGFDEKFVHWILVILQSARLSV 629



 Score = 33.5 bits (75), Expect(2) = 2e-09
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 170 FFNPGRGLRQGDPLAPILFAIDEQ 99
           FF    G+RQGDPL+P+LF + E+
Sbjct: 638 FFTCSHGVRQGDPLSPLLFCLVEE 661


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 51.6 bits (122), Expect(2) = 3e-09
 Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
 Frame = -3

Query: 297 SIKLDISQAYDSLDWSFLLNVLRQFG---TFLHWIKVILDNSYISI 169
           + K+DIS+A+D+L+W FLL VL+QFG   TF +WI  IL ++ +SI
Sbjct: 258 AFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSI 303



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -1

Query: 170 FFNPGRGLRQGDPLAPILFAIDE 102
           +F+  RG+RQGDPL+P+LF + E
Sbjct: 312 YFSCSRGVRQGDPLSPLLFCLAE 334


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 45.8 bits (107), Expect(2) = 9e-09
 Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = -3

Query: 297 SIKLDISQAYDSLDWSFLLNVLRQFG---TFLHWIKVILDNSYISI 169
           ++K+D+++A+D+L+W FLL VL+ FG    F +WIK IL +S + I
Sbjct: 319 ALKIDVTKAFDTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFI 364



 Score = 38.5 bits (88), Expect(2) = 9e-09
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 170 FFNPGRGLRQGDPLAPILFAIDEQ 99
           FFN  RG+RQGDPL+P+LF I E+
Sbjct: 373 FFNCNRGVRQGDPLSPLLFCIVEE 396


>gb|ABN08012.1| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 172

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 21/39 (53%), Positives = 33/39 (84%), Gaps = 3/39 (7%)
 Frame = -3

Query: 288 LDISQAYDSLDWSFLLNVLRQFG---TFLHWIKVILDNS 181
           +DI++A+D+L+WSFLL VL+ FG   TF +WI+VIL+++
Sbjct: 20  IDIAKAFDTLEWSFLLKVLKDFGFNLTFCNWIEVILNSA 58



 Score = 28.1 bits (61), Expect(2) = 2e-06
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 155 RGLRQGDPLAPILFAIDE 102
           RG+RQGDPL+   F +DE
Sbjct: 70  RGVRQGDPLSFFFFCLDE 87


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = -3

Query: 297 SIKLDISQAYDSLDWSFLLNVLRQFGTFLHWIKVILD 187
           +IK DIS+AYD ++W FL   +R  G   HWI++I++
Sbjct: 572 AIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIME 608



 Score = 33.9 bits (76), Expect(2) = 3e-06
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -1

Query: 161 PGRGLRQGDPLAPILFAI 108
           P RGLRQGDPL+P LF I
Sbjct: 629 PSRGLRQGDPLSPYLFVI 646