BLASTX nr result

ID: Aconitum21_contig00019723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019723
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   231   7e-59
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              231   7e-59
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   222   4e-56
ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   220   2e-55
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   216   2e-54

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  231 bits (589), Expect = 7e-59
 Identities = 107/139 (76%), Positives = 123/139 (88%)
 Frame = -2

Query: 594  ISAAMIANQVKRQVDGFLSMYYKGVMMCDDETCKCTTRSLNLRVIGDSERGTVCPNYPRC 415
            +S A+IANQVKRQ DGF+SMYYKG MMCDDETCK TT SLNLRVIGDSERGTVCPNYPRC
Sbjct: 1383 MSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRC 1442

Query: 414  NGHLVRKYTEVDLYKQLSYFCHLLDAVGFFEKLDLKVRVPLEKDLARIQLVVDLAASTVQ 235
            NG LVRKYTE DLYKQLSYFCH+LD V   EK+++  R+P+EK+LARI+ +V+LAAST Q
Sbjct: 1443 NGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQ 1502

Query: 234  KIRDRCAYGWVQMKDLTIS 178
            KIRDRCAYGWVQ+ DLT++
Sbjct: 1503 KIRDRCAYGWVQLDDLTVT 1521


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  231 bits (589), Expect = 7e-59
 Identities = 107/139 (76%), Positives = 123/139 (88%)
 Frame = -2

Query: 594  ISAAMIANQVKRQVDGFLSMYYKGVMMCDDETCKCTTRSLNLRVIGDSERGTVCPNYPRC 415
            +S A+IANQVKRQ DGF+SMYYKG MMCDDETCK TT SLNLRVIGDSERGTVCPNYPRC
Sbjct: 1422 MSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRC 1481

Query: 414  NGHLVRKYTEVDLYKQLSYFCHLLDAVGFFEKLDLKVRVPLEKDLARIQLVVDLAASTVQ 235
            NG LVRKYTE DLYKQLSYFCH+LD V   EK+++  R+P+EK+LARI+ +V+LAAST Q
Sbjct: 1482 NGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQ 1541

Query: 234  KIRDRCAYGWVQMKDLTIS 178
            KIRDRCAYGWVQ+ DLT++
Sbjct: 1542 KIRDRCAYGWVQLDDLTVT 1560


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  222 bits (565), Expect = 4e-56
 Identities = 103/140 (73%), Positives = 122/140 (87%)
 Frame = -2

Query: 594  ISAAMIANQVKRQVDGFLSMYYKGVMMCDDETCKCTTRSLNLRVIGDSERGTVCPNYPRC 415
            IS+A+IANQVKRQV+GF+S YYKGVMMCDDETC  TTRSLNLRVIGDSERGTVCPNYPRC
Sbjct: 1422 ISSALIANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRC 1481

Query: 414  NGHLVRKYTEVDLYKQLSYFCHLLDAVGFFEKLDLKVRVPLEKDLARIQLVVDLAASTVQ 235
            NGHL+R+YTE DLYKQL+YFC +LD V   EK++  +R+ +EK+L RI+ VV+ AASTV+
Sbjct: 1482 NGHLLRQYTEADLYKQLAYFCFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAASTVE 1541

Query: 234  KIRDRCAYGWVQMKDLTISF 175
            K RDRCAY WVQ+KDL +SF
Sbjct: 1542 KFRDRCAYSWVQLKDLIVSF 1561


>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score =  220 bits (560), Expect = 2e-55
 Identities = 97/139 (69%), Positives = 123/139 (88%)
 Frame = -2

Query: 594 ISAAMIANQVKRQVDGFLSMYYKGVMMCDDETCKCTTRSLNLRVIGDSERGTVCPNYPRC 415
           ISAAMIANQVKRQ + F+ MYY+G++MCDDETCK TTRS++ R++GDSERGTVCPNYPRC
Sbjct: 472 ISAAMIANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSVSFRLVGDSERGTVCPNYPRC 531

Query: 414 NGHLVRKYTEVDLYKQLSYFCHLLDAVGFFEKLDLKVRVPLEKDLARIQLVVDLAASTVQ 235
           NGHL RKYTE DLYKQLSYFCH+ D V + EK++ K R+P+EK+L +I+ +VDLAAST+Q
Sbjct: 532 NGHLNRKYTEADLYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQ 591

Query: 234 KIRDRCAYGWVQMKDLTIS 178
           KIRDRCA+GWV+++DL ++
Sbjct: 592 KIRDRCAFGWVKLQDLVVA 610


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  216 bits (551), Expect = 2e-54
 Identities = 100/139 (71%), Positives = 119/139 (85%)
 Frame = -2

Query: 594  ISAAMIANQVKRQVDGFLSMYYKGVMMCDDETCKCTTRSLNLRVIGDSERGTVCPNYPRC 415
            IS AM+ANQVKRQ +GF+SMYYKG+M CDDETCK  TRSLNLR+IGDSERGTVCPNYPRC
Sbjct: 1387 ISPAMLANQVKRQAEGFVSMYYKGLMTCDDETCKHITRSLNLRLIGDSERGTVCPNYPRC 1446

Query: 414  NGHLVRKYTEVDLYKQLSYFCHLLDAVGFFEKLDLKVRVPLEKDLARIQLVVDLAASTVQ 235
            NG LVRKYTE +LYKQLS++C+LLD V   EK+D   R+ LEK + +I+ +VDLA STVQ
Sbjct: 1447 NGRLVRKYTEAELYKQLSFYCYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDLAVSTVQ 1506

Query: 234  KIRDRCAYGWVQMKDLTIS 178
            KIRDRCAYGWVQ+ DL+++
Sbjct: 1507 KIRDRCAYGWVQLSDLSVT 1525


Top