BLASTX nr result
ID: Aconitum21_contig00019682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00019682
(1461 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ... 433 e-165
ref|XP_002888226.1| helicase domain-containing protein [Arabidop... 405 e-147
ref|NP_176103.2| helicase associated domain-containing protein [... 403 e-146
gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thali... 403 e-146
emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group] g... 413 e-146
>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
gi|297739540|emb|CBI29722.3| unnamed protein product
[Vitis vinifera]
Length = 1458
Score = 433 bits (1114), Expect(2) = e-165
Identities = 220/301 (73%), Positives = 251/301 (83%)
Frame = +2
Query: 476 NERTKLLFCTTGILLRKLAGDKNLDTVTHVIVDEVHERSLLGDFLLVILKDLIEKQSAQN 655
N RTKLLFCTTGILLRKLAGDKNL +THVIVDEVHERSLLGDFLL++LK+LIEKQS +
Sbjct: 710 NVRTKLLFCTTGILLRKLAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDS 769
Query: 656 TRKLKVILMSATVDSSLFSKYFGNCPVLTAQGRTHPVSSYFLEDIYENLEYCLASDSPAS 835
T KLKVILMSATVDS+LFS+YFG CPV+TA GRTHPVS+YFLEDIYE+++Y LASDSPAS
Sbjct: 770 TPKLKVILMSATVDSNLFSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPAS 829
Query: 836 LRLITPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLNETYVNPNYDSSLYISYCERTQEN 1015
+R T K+K +S V+N RGK+NLVLS+WGDDS L+E +NP Y + Y SY E+TQ+N
Sbjct: 830 IRYETSIKQK--TSAVNNRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQN 887
Query: 1016 LKAXXXXXXXXXXXXXXVCHIDETSPAGSILVFLPGVAEIYMLFDRLVASYRFGGDSSDW 1195
LK VC++DET PAG+ILVFLPGVAEIYML D+L ASYRF G SSDW
Sbjct: 888 LKRLNEDVIDYDLLEDLVCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDW 947
Query: 1196 LLPLHSSLASVDQRKVFLSPPVNIRKVIIATDIAETSITIDDVVHVIDCGNHKEHRYNPQ 1375
LLPLHSS+AS DQRKVFL PP NIRKVIIAT+IAETSITIDDVV+VIDCG HKE+RYNPQ
Sbjct: 948 LLPLHSSIASDDQRKVFLQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQ 1007
Query: 1376 K 1378
K
Sbjct: 1008 K 1008
Score = 175 bits (443), Expect(2) = e-165
Identities = 95/163 (58%), Positives = 117/163 (71%), Gaps = 5/163 (3%)
Frame = +1
Query: 1 GESPIRVEDGEETRRASFVDSLLKTGDFESSACVTSSFEEMPAEAQV--LENVESVSTAG 174
GES IR+ED EE RRA FV+S+L GD S+A V + +P + Q+ +E +++ AG
Sbjct: 513 GESSIRIEDSEEDRRAGFVNSILDAGDSGSTAFVDVTDNSLPKKFQMPQIEENRNLNAAG 572
Query: 175 ---KVKRQNNFKVAESTRLRQEQYNKRGMQKYKEMLDARAALPIAELRSNLLGLLKENDF 345
K R NFK AES+ L+QE NK + KYK+ML R+ LPIAEL+S +L +LKE
Sbjct: 573 PDLKPGRVGNFKEAESSYLKQEYENKMKIGKYKDMLKTRSGLPIAELKSEILQVLKEKSV 632
Query: 346 LVVCGETGCGKTTQVPQFIMDDMIEAGLGGHCNIICTQPRRIA 474
LVVCGETG GKTTQVPQFI+DDMIEAG GG+CNIICTQPRRIA
Sbjct: 633 LVVCGETGSGKTTQVPQFILDDMIEAGNGGYCNIICTQPRRIA 675
>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297334067|gb|EFH64485.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1458
Score = 405 bits (1041), Expect(2) = e-147
Identities = 206/303 (67%), Positives = 246/303 (81%), Gaps = 1/303 (0%)
Frame = +2
Query: 473 RNERTKLLFCTTGILLRKLAGDKNLDTVTHVIVDEVHERSLLGDFLLVILKDLIEKQSAQ 652
R+++T+LLFCTTGILLRKLAGDK L+ VTH+IVDEVHERSLLGDFLL+ILK LIEKQS
Sbjct: 708 RSDKTRLLFCTTGILLRKLAGDKTLNDVTHIIVDEVHERSLLGDFLLIILKTLIEKQSCD 767
Query: 653 NT-RKLKVILMSATVDSSLFSKYFGNCPVLTAQGRTHPVSSYFLEDIYENLEYCLASDSP 829
NT RKLKVILMSATVD+ LFS+YFG+CPV+TAQGRTHPV+++FLE+IYE++ Y LA DSP
Sbjct: 768 NTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSP 827
Query: 830 ASLRLITPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLNETYVNPNYDSSLYISYCERTQ 1009
A+LR + KEKL S V++ RGKKNLVL+ WGDD L+E +NP Y SS Y SY ++TQ
Sbjct: 828 AALRSDSSIKEKLGS--VNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQ 885
Query: 1010 ENLKAXXXXXXXXXXXXXXVCHIDETSPAGSILVFLPGVAEIYMLFDRLVASYRFGGDSS 1189
+NLK +CHID+T G+IL+FLPGV+EIYML DR+ ASYRF G ++
Sbjct: 886 QNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVSEIYMLLDRIAASYRFRGPAA 945
Query: 1190 DWLLPLHSSLASVDQRKVFLSPPVNIRKVIIATDIAETSITIDDVVHVIDCGNHKEHRYN 1369
DWLLPLHSS+AS +QRKVFL PP IRKVI AT+IAETSITIDDVV+VID G HKE+RYN
Sbjct: 946 DWLLPLHSSIASTEQRKVFLRPPKGIRKVIAATNIAETSITIDDVVYVIDSGKHKENRYN 1005
Query: 1370 PQK 1378
PQK
Sbjct: 1006 PQK 1008
Score = 146 bits (368), Expect(2) = e-147
Identities = 80/157 (50%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
Frame = +1
Query: 19 VEDGEETRRASFVDSLLKTGDFESSACVTSSFEEMPAEAQVLENVESVSTAGKVK----- 183
++ EE RRA+FVD LL+ +F +A +S +P V V+ G VK
Sbjct: 521 IQSTEEDRRANFVDKLLEEDNFSLTASSSSIDNALPL---VDSYVKEKDDLGVVKSNHRA 577
Query: 184 RQNNFKVAESTRLRQEQYNKRGMQKYKEMLDARAALPIAELRSNLLGLLKENDFLVVCGE 363
R++++ AE L+++Q NK+ QKYK+ML R ALPI+E+++ +L LKE D LVVCGE
Sbjct: 578 RKDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGE 637
Query: 364 TGCGKTTQVPQFIMDDMIEAGLGGHCNIICTQPRRIA 474
TG GKTTQVPQFI+DDMI++G GG+CNIICTQPRRIA
Sbjct: 638 TGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIA 674
>ref|NP_176103.2| helicase associated domain-containing protein [Arabidopsis thaliana]
gi|332195372|gb|AEE33493.1| helicase associated
domain-containing protein [Arabidopsis thaliana]
Length = 1459
Score = 403 bits (1035), Expect(2) = e-146
Identities = 205/303 (67%), Positives = 245/303 (80%), Gaps = 1/303 (0%)
Frame = +2
Query: 473 RNERTKLLFCTTGILLRKLAGDKNLDTVTHVIVDEVHERSLLGDFLLVILKDLIEKQSAQ 652
R+++T+LLFCTTGILLRKLAGD+ L+ VTH+IVDEVHERSLLGDFLL+ILK LIEKQS
Sbjct: 709 RSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCD 768
Query: 653 NT-RKLKVILMSATVDSSLFSKYFGNCPVLTAQGRTHPVSSYFLEDIYENLEYCLASDSP 829
NT RKLKVILMSATVD+ LFS+YFG+CPV+TAQGRTHPV+++FLE+IYE++ Y LA DSP
Sbjct: 769 NTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSP 828
Query: 830 ASLRLITPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLNETYVNPNYDSSLYISYCERTQ 1009
A+LR T K+KL S V++ RGKKNLVL+ WGDD L+E +NP Y SS Y SY ++TQ
Sbjct: 829 AALRSDTSIKDKLGS--VNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQ 886
Query: 1010 ENLKAXXXXXXXXXXXXXXVCHIDETSPAGSILVFLPGVAEIYMLFDRLVASYRFGGDSS 1189
+NLK +CHID+T G+IL+FLPGVAEIYML D L ASYRF G ++
Sbjct: 887 QNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAA 946
Query: 1190 DWLLPLHSSLASVDQRKVFLSPPVNIRKVIIATDIAETSITIDDVVHVIDCGNHKEHRYN 1369
DWLLPLHSS+AS +QRKVFL PP +RKVI AT+IAETSITIDDVV+VID G HKE+RYN
Sbjct: 947 DWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYN 1006
Query: 1370 PQK 1378
PQK
Sbjct: 1007 PQK 1009
Score = 144 bits (364), Expect(2) = e-146
Identities = 78/157 (49%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Frame = +1
Query: 19 VEDGEETRRASFVDSLLKTGDFESSACVTSSFEEMPAEAQVLENVESVSTAGKVKRQNNF 198
++ EE RRA+FVD LL+ F + +S +P +++ + + G VK N
Sbjct: 522 IQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDDL---GVVKSNNRA 578
Query: 199 K-----VAESTRLRQEQYNKRGMQKYKEMLDARAALPIAELRSNLLGLLKENDFLVVCGE 363
K AE L+++Q NK+ QKYK+ML R ALPI+E+++ +L LKE D LVVCGE
Sbjct: 579 KRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGE 638
Query: 364 TGCGKTTQVPQFIMDDMIEAGLGGHCNIICTQPRRIA 474
TG GKTTQVPQFI+DDMI++G GG+CNIICTQPRRIA
Sbjct: 639 TGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIA 675
>gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
Length = 1453
Score = 403 bits (1035), Expect(2) = e-146
Identities = 205/303 (67%), Positives = 245/303 (80%), Gaps = 1/303 (0%)
Frame = +2
Query: 473 RNERTKLLFCTTGILLRKLAGDKNLDTVTHVIVDEVHERSLLGDFLLVILKDLIEKQSAQ 652
R+++T+LLFCTTGILLRKLAGD+ L+ VTH+IVDEVHERSLLGDFLL+ILK LIEKQS
Sbjct: 709 RSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCD 768
Query: 653 NT-RKLKVILMSATVDSSLFSKYFGNCPVLTAQGRTHPVSSYFLEDIYENLEYCLASDSP 829
NT RKLKVILMSATVD+ LFS+YFG+CPV+TAQGRTHPV+++FLE+IYE++ Y LA DSP
Sbjct: 769 NTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSP 828
Query: 830 ASLRLITPTKEKLRSSTVDNHRGKKNLVLSSWGDDSQLNETYVNPNYDSSLYISYCERTQ 1009
A+LR T K+KL S V++ RGKKNLVL+ WGDD L+E +NP Y SS Y SY ++TQ
Sbjct: 829 AALRSDTSIKDKLGS--VNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQ 886
Query: 1010 ENLKAXXXXXXXXXXXXXXVCHIDETSPAGSILVFLPGVAEIYMLFDRLVASYRFGGDSS 1189
+NLK +CHID+T G+IL+FLPGVAEIYML D L ASYRF G ++
Sbjct: 887 QNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAA 946
Query: 1190 DWLLPLHSSLASVDQRKVFLSPPVNIRKVIIATDIAETSITIDDVVHVIDCGNHKEHRYN 1369
DWLLPLHSS+AS +QRKVFL PP +RKVI AT+IAETSITIDDVV+VID G HKE+RYN
Sbjct: 947 DWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYN 1006
Query: 1370 PQK 1378
PQK
Sbjct: 1007 PQK 1009
Score = 144 bits (364), Expect(2) = e-146
Identities = 78/157 (49%), Positives = 104/157 (66%), Gaps = 5/157 (3%)
Frame = +1
Query: 19 VEDGEETRRASFVDSLLKTGDFESSACVTSSFEEMPAEAQVLENVESVSTAGKVKRQNNF 198
++ EE RRA+FVD LL+ F + +S +P +++ + + G VK N
Sbjct: 522 IQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDDL---GVVKSNNRA 578
Query: 199 K-----VAESTRLRQEQYNKRGMQKYKEMLDARAALPIAELRSNLLGLLKENDFLVVCGE 363
K AE L+++Q NK+ QKYK+ML R ALPI+E+++ +L LKE D LVVCGE
Sbjct: 579 KRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGE 638
Query: 364 TGCGKTTQVPQFIMDDMIEAGLGGHCNIICTQPRRIA 474
TG GKTTQVPQFI+DDMI++G GG+CNIICTQPRRIA
Sbjct: 639 TGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIA 675
>emb|CAE03039.3| OSJNBa0084A10.14 [Oryza sativa Japonica Group]
gi|116309362|emb|CAH66443.1| B0308C03.3 [Oryza sativa
Indica Group]
Length = 1439
Score = 413 bits (1062), Expect(2) = e-146
Identities = 206/304 (67%), Positives = 242/304 (79%), Gaps = 2/304 (0%)
Frame = +2
Query: 473 RNERTKLLFCTTGILLRKLAGDKNLDTVTHVIVDEVHERSLLGDFLLVILKDLIEKQSAQ 652
RNERTKLLFCTTGILLRKL+G+ +L VTHV+VDEVHER++LGDFLL++LK L+EK+S Q
Sbjct: 684 RNERTKLLFCTTGILLRKLSGNNDLSDVTHVVVDEVHERTILGDFLLIVLKSLVEKRSNQ 743
Query: 653 NTRKLKVILMSATVDSSLFSKYFGNCPVLTAQGRTHPVSSYFLEDIYENLEYCLASDSPA 832
RKLKVILMSATVDSSLF++YFG+CPV+ +GRTHPVSS+FLED+YE +EYCLA DSPA
Sbjct: 744 PGRKLKVILMSATVDSSLFARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCLALDSPA 803
Query: 833 SLRLITPTKEKLR--SSTVDNHRGKKNLVLSSWGDDSQLNETYVNPNYDSSLYISYCERT 1006
S EK + SSTV+N RGKKNLVLSSWGD+S L E YVNP+Y + Y SY ERT
Sbjct: 804 SGAYFQQHGEKWKNASSTVNNRRGKKNLVLSSWGDESVLTEDYVNPHYTTDCYQSYSERT 863
Query: 1007 QENLKAXXXXXXXXXXXXXXVCHIDETSPAGSILVFLPGVAEIYMLFDRLVASYRFGGDS 1186
+NLK +C+IDE P G++LVFLPGVAEI ML DRL AS RFG +S
Sbjct: 864 NQNLKRLNEDVIDFDLLEDLICYIDENCPPGAVLVFLPGVAEIDMLIDRLSASVRFGRES 923
Query: 1187 SDWLLPLHSSLASVDQRKVFLSPPVNIRKVIIATDIAETSITIDDVVHVIDCGNHKEHRY 1366
SDW+LPLHS LA DQRKVF SPP NIRK+I+ATDIAETSITIDDV++V+D G HKE+RY
Sbjct: 924 SDWILPLHSLLAPTDQRKVFQSPPENIRKIIVATDIAETSITIDDVIYVVDTGKHKENRY 983
Query: 1367 NPQK 1378
NPQK
Sbjct: 984 NPQK 987
Score = 134 bits (336), Expect(2) = e-146
Identities = 76/162 (46%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Frame = +1
Query: 7 SPIRVEDGEETRRASFVDSLLKTGDFESSACVTSSFEEMPA-EAQVLENVESVSTAGKVK 183
S RV D E++RRA FVD LL + V + + + +++ +E+ SV +
Sbjct: 489 SSSRVMDTEDSRRAGFVDKLLDMDANTTPHQVEDASDGATSVDSRSIEDSYSVHEKKETY 548
Query: 184 RQN-----NFKVAESTRLRQEQYNKRGMQKYKEMLDARAALPIAELRSNLLGLLKENDFL 348
N + + EST L++ NK Y +ML+ARA+LPI+ + + L LLKEND +
Sbjct: 549 LVNRTGSRSAEQVESTVLKKHLENKMKQSSYLKMLEARASLPISRFKDHFLQLLKENDVI 608
Query: 349 VVCGETGCGKTTQVPQFIMDDMIEAGLGGHCNIICTQPRRIA 474
VVCGETGCGKTTQVPQFI+DDMIE+ LGG+C+I+CTQPRRIA
Sbjct: 609 VVCGETGCGKTTQVPQFILDDMIESELGGYCSIVCTQPRRIA 650