BLASTX nr result

ID: Aconitum21_contig00019561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019561
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]   197   1e-48
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ...   184   9e-45
gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]       181   4e-44
emb|CAA05629.1| membrane-associated salt-inducible protein like ...   181   7e-44

>ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Vitis vinifera]
          Length = 414

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/140 (70%), Positives = 113/140 (80%), Gaps = 2/140 (1%)
 Frame = -3

Query: 421 EIYNNVSDPNSSPLSIRYAQDLIVKRLTKSRRFADVEALINSHKKDPKITLENYFSTLIR 242
           EIY++VS   +SPL+ RYAQDL VKRL KSRRFAD+E LI SHK DPKIT E Y STLIR
Sbjct: 55  EIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIR 114

Query: 241 SYGVAGMHDHAYRLFGEMEELGTPRSAVSFNALLAAYNMCKKFDQVPKLFDEIPNKYNVV 62
           SYG+AGM  HA R F +MEELGTPRS++SFNALL+A N  K FDQVPK F+EIP +Y V+
Sbjct: 115 SYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVL 174

Query: 61  PDKFSYGILIKSYCE--LSD 8
           PDK SYGIL+KSYCE  LSD
Sbjct: 175 PDKISYGILVKSYCESGLSD 194


>emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
          Length = 416

 Score =  197 bits (500), Expect = 1e-48
 Identities = 98/140 (70%), Positives = 112/140 (80%), Gaps = 2/140 (1%)
 Frame = -3

Query: 421 EIYNNVSDPNSSPLSIRYAQDLIVKRLTKSRRFADVEALINSHKKDPKITLENYFSTLIR 242
           EIY++VS   +SPL+ RYAQDL VKRL KSRRFAD+E LI SHK DPKIT E Y STLIR
Sbjct: 57  EIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIR 116

Query: 241 SYGVAGMHDHAYRLFGEMEELGTPRSAVSFNALLAAYNMCKKFDQVPKLFDEIPNKYNVV 62
           SYG+AGM  HA R F +MEELGTPRS++SFNALL+A N  K FDQVPK F+EIP +Y + 
Sbjct: 117 SYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIX 176

Query: 61  PDKFSYGILIKSYCE--LSD 8
           PDK SYGIL+KSYCE  LSD
Sbjct: 177 PDKISYGILVKSYCESGLSD 196


>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312834|gb|EFH43257.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 411

 Score =  184 bits (466), Expect = 9e-45
 Identities = 92/141 (65%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 EIYNNVSDPNSSPLSIRYAQDLIVKRLTKSRRFADVEALINSHKKDPKITLENYFSTLIR 242
           +IY NVSD ++SP+S RYAQ+L V+RL K RRF+D+E LI SHK DPKI  E ++STLIR
Sbjct: 51  KIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIR 110

Query: 241 SYGVAGMHDHAYRLFGEMEELGTPRSAVSFNALLAAYNMCKKFDQVPKLFDEIPNKYN-V 65
           SYG A M DHA R F +M++ GTPRSAVSFNALL A    KKFD+VP+LFDEIP +YN +
Sbjct: 111 SYGRASMFDHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKKFDKVPQLFDEIPQRYNKI 170

Query: 64  VPDKFSYGILIKSYCELSDPE 2
           VPDK SYGILIKSYC+   P+
Sbjct: 171 VPDKISYGILIKSYCDSGSPQ 191


>gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
          Length = 417

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/140 (60%), Positives = 108/140 (77%)
 Frame = -3

Query: 421 EIYNNVSDPNSSPLSIRYAQDLIVKRLTKSRRFADVEALINSHKKDPKITLENYFSTLIR 242
           EIY++VS   +SPLS RY Q+  V+RL KS RF+D+E+ + SHK DPKIT E + S+LIR
Sbjct: 61  EIYSSVSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFLESHKNDPKITQEPFLSSLIR 120

Query: 241 SYGVAGMHDHAYRLFGEMEELGTPRSAVSFNALLAAYNMCKKFDQVPKLFDEIPNKYNVV 62
           SYG+AGM DHA + F EM++LGTPRS VSFNALL+A N  K F + P+LFDE+P +Y + 
Sbjct: 121 SYGLAGMFDHALKTFNEMDDLGTPRSTVSFNALLSACNSSKNFGRAPELFDEVPQRYGLS 180

Query: 61  PDKFSYGILIKSYCELSDPE 2
           PDKFSYG LIK+YCE+  PE
Sbjct: 181 PDKFSYGNLIKAYCEMGSPE 200


>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
           thaliana]
          Length = 428

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/141 (63%), Positives = 110/141 (78%), Gaps = 1/141 (0%)
 Frame = -3

Query: 421 EIYNNVSDPNSSPLSIRYAQDLIVKRLTKSRRFADVEALINSHKKDPKITLENYFSTLIR 242
           +IY NVSD ++SP+S RYAQ+L V+RL K RRF+D+E LI SHK DPKI  E ++STLIR
Sbjct: 67  KIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIR 126

Query: 241 SYGVAGMHDHAYRLFGEMEELGTPRSAVSFNALLAAYNMCKKFDQVPKLFDEIPNKYN-V 65
           SYG A M +HA R F +M++ GTPRSAVSFNALL A    K FD+VP+LFDEIP +YN +
Sbjct: 127 SYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKI 186

Query: 64  VPDKFSYGILIKSYCELSDPE 2
           +PDK SYGILIKSYC+   PE
Sbjct: 187 IPDKISYGILIKSYCDSGTPE 207


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