BLASTX nr result

ID: Aconitum21_contig00019551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019551
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
emb|CBI37720.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_002873394.1| hypothetical protein ARALYDRAFT_487743 [Arab...   106   2e-21
ref|XP_002514404.1| conserved hypothetical protein [Ricinus comm...   104   7e-21

>ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera]
          Length = 246

 Score =  129 bits (325), Expect = 2e-28
 Identities = 76/140 (54%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
 Frame = -2

Query: 419 RKGTMRITMRDRSQNRKPLQRGR-LSSEVIQTVQALKRAAARENSEEQVKQVFQFKVXXX 243
           ++G   I MRDRSQNRKPLQRGR LS E IQ VQALKRA   E+S E+V   F+ KV   
Sbjct: 31  KRGIFTINMRDRSQNRKPLQRGRNLSIEAIQAVQALKRAKRDESSLERV---FESKVRRL 87

Query: 242 XXXXXXXXXXXLIRQNQPLLAHKVFEDVRKEYWYKPQLLMFADMIKMFATNSLFEKVELL 63
                      L+ QN+ LLA KVF+DVRKEYWYKPQ+ ++A+MI++  +N LFE+V LL
Sbjct: 88  LKLDMIAVLKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGLFEQVHLL 147

Query: 62  LFYLQMERYQLNADAEGFNA 3
           L YL+ E   L  + EGFNA
Sbjct: 148 LSYLKKET-GLELETEGFNA 166


>emb|CBI37720.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  125 bits (313), Expect = 5e-27
 Identities = 74/132 (56%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 MRDRSQNRKPLQRGR-LSSEVIQTVQALKRAAARENSEEQVKQVFQFKVXXXXXXXXXXX 219
           MRDRSQNRKPLQRGR LS E IQ VQALKRA   E+S E+V   F+ KV           
Sbjct: 1   MRDRSQNRKPLQRGRNLSIEAIQAVQALKRAKRDESSLERV---FESKVRRLLKLDMIAV 57

Query: 218 XXXLIRQNQPLLAHKVFEDVRKEYWYKPQLLMFADMIKMFATNSLFEKVELLLFYLQMER 39
              L+ QN+ LLA KVF+DVRKEYWYKPQ+ ++A+MI++  +N LFE+V LLL YL+ E 
Sbjct: 58  LKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGLFEQVHLLLSYLKKET 117

Query: 38  YQLNADAEGFNA 3
             L  + EGFNA
Sbjct: 118 -GLELETEGFNA 128


>ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449473007|ref|XP_004153757.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449517150|ref|XP_004165609.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 249

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = -2

Query: 416 KGTMRITMRDRSQNRKPLQRGR-LSSEVIQTVQALKRAAARENSEEQVKQVFQFKVXXXX 240
           +G  R+TMR  S+NRKPLQ+GR LS E IQ VQ+LKR    +   +Q+ +V+  K+    
Sbjct: 35  EGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRT---KKDLQQLDRVYDSKIRRLL 91

Query: 239 XXXXXXXXXXLIRQNQPLLAHKVFEDVRKEYWYKPQLLMFADMIKMFATNSLFEKVELLL 60
                     L+RQN+  LA KVFEDVRKE+WYKPQ+ ++AD+I + A+N LFE+V+++L
Sbjct: 92  KFDMLAVLRELLRQNECSLALKVFEDVRKEHWYKPQVSLYADIITVLASNGLFERVQIIL 151

Query: 59  FYLQMERYQLNADAEGFNA 3
            Y++ E   L  + +GFNA
Sbjct: 152 SYMKAEA-DLAPEIDGFNA 169


>ref|XP_002873394.1| hypothetical protein ARALYDRAFT_487743 [Arabidopsis lyrata subsp.
           lyrata] gi|297319231|gb|EFH49653.1| hypothetical protein
           ARALYDRAFT_487743 [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score =  106 bits (264), Expect = 2e-21
 Identities = 69/141 (48%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
 Frame = -2

Query: 407 MRITMRDRSQNRKPLQRGR-LSSEVIQTVQALKRA------AARENSEEQVKQVFQFKVX 249
           M I MRDRS+NRKPLQRGR LS E IQ VQALKRA       +  +S   V +V   K  
Sbjct: 524 MGIKMRDRSKNRKPLQRGRMLSIEAIQAVQALKRANPLLPPPSPSSSSALVDRVIISKFR 583

Query: 248 XXXXXXXXXXXXXLIRQNQPLLAHKVFEDVRKEYWYKPQLLMFADMIKMFATNSLFEKVE 69
                        L+RQN+  LA KVFE++RKEYWYKPQ+ M+ DMI + A NSL E+V 
Sbjct: 584 RLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVN 643

Query: 68  LLLFYLQMERYQLNADAEGFN 6
            L   ++ E+  L AD E FN
Sbjct: 644 YLYSAMKSEK-GLMADIEWFN 663


>ref|XP_002514404.1| conserved hypothetical protein [Ricinus communis]
           gi|223546501|gb|EEF48000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score =  104 bits (260), Expect = 7e-21
 Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = -2

Query: 419 RKGTMRITMRDRSQNRKPLQRGR-LSSEVIQTVQALKRAAARENSEEQVKQVFQFKVXXX 243
           R+  M +  + +  NRK LQ+GR LS E IQ VQ+LKRA    ++   +  VF+ K    
Sbjct: 36  RRMVMVVNAKGKEDNRKQLQKGRNLSIESIQAVQSLKRAYYF-STNSNLDSVFRSKFSRL 94

Query: 242 XXXXXXXXXXXLIRQNQPLLAHKVFEDVRKEYWYKPQLLMFADMIKMFATNSLFEKVELL 63
                      L+RQN  LLA KVF+D+RKEYWYKPQ+ ++ DMIK  A+N  FE+VELL
Sbjct: 95  LKLDMLSVLRELLRQNHCLLALKVFKDIRKEYWYKPQVSLYDDMIKAMASNGYFEQVELL 154

Query: 62  LFYLQMERYQLNADAEGFNA 3
             YL+ E   +  + + FNA
Sbjct: 155 CIYLKTETNLIEPETDAFNA 174


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