BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019380
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890279.1| pentatricopeptide repeat-containing protein ...   241   2e-61
ref|NP_564054.1| pentatricopeptide repeat-containing protein [Ar...   236   7e-60
dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]           236   7e-60
gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]             218   2e-54
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-54

>ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297336121|gb|EFH66538.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 953

 Score =  241 bits (616), Expect = 2e-61
 Identities = 129/277 (46%), Positives = 171/277 (61%), Gaps = 45/277 (16%)
 Frame = -1

Query: 1022 GLKPDAFTFIGILMACSHAGLVGEGLNYFSEMQKKYHIEPKLEHYSCMVDMLGRAGHLDH 843
            G  PD  TF+G+L AC+H+GL+ EGL Y  +M+  + ++P L+HY+C++DMLGRAG LD+
Sbjct: 677  GRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDN 736

Query: 842  AESLVEEMRETPDVGIWSALLSACRLHGNVTLGEKVSEKLLELEPYKAENYVLVSNMFAG 663
            A  +  EM E PDVGIW++LLS CR+H N+ +GEKV+ KL  LEP K ENYVL+SN++AG
Sbjct: 737  ALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAG 796

Query: 662  AXXXXXXXXXXXRMKEIGLKKN------------MKDVVGLRLMVKF------------- 558
                        RMKE+ L+K+               VVG R +  F             
Sbjct: 797  LGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMK 856

Query: 557  ---------TTS*QVCCA-----------GTVLAITFGLLKTTKGRTVRVCKNLGVCGDC 438
                     T+S Q   +              LAIT+GL+KT++G T+RV KNL +C DC
Sbjct: 857  IWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDC 916

Query: 437  HNAAKLVSKVVDRDIVVRDNKRFHHFSDCFCSCGDYW 327
            HNAAKL+SKV++R+IVVRDNKRFHHF+  FCSCGDYW
Sbjct: 917  HNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953


>ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g18485 gi|332191599|gb|AEE29720.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  236 bits (602), Expect = 7e-60
 Identities = 128/278 (46%), Positives = 169/278 (60%), Gaps = 46/278 (16%)
 Frame = -1

Query: 1022 GLKPDAFTFIGILMACSHAGLVGEGLNYFSEMQKKYHIEPKLEHYSCMVDMLGRAGHLDH 843
            G  PD  TF+G+L AC+H+GL+ EGL Y  +M+  + ++P L+HY+C++DMLGRAG LD 
Sbjct: 693  GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752

Query: 842  AESLV-EEMRETPDVGIWSALLSACRLHGNVTLGEKVSEKLLELEPYKAENYVLVSNMFA 666
            A  +V EEM E  DVGIW +LLS+CR+H N+ +GEKV+ KL ELEP K ENYVL+SN++A
Sbjct: 753  ALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812

Query: 665  GAXXXXXXXXXXXRMKEIGLKKN------------MKDVVGLRLMVKF------------ 558
            G            RM E+ L+K+               VVG R +  F            
Sbjct: 813  GLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 872

Query: 557  ----------TTS*QVCCA-----------GTVLAITFGLLKTTKGRTVRVCKNLGVCGD 441
                      T S Q   +              LA+T+GL+KT++G T+RV KNL +C D
Sbjct: 873  KISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVD 932

Query: 440  CHNAAKLVSKVVDRDIVVRDNKRFHHFSDCFCSCGDYW 327
            CHNAAKL+SKV++R+IVVRDNKRFHHF +  CSCGDYW
Sbjct: 933  CHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970


>dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  236 bits (602), Expect = 7e-60
 Identities = 128/278 (46%), Positives = 169/278 (60%), Gaps = 46/278 (16%)
 Frame = -1

Query: 1022 GLKPDAFTFIGILMACSHAGLVGEGLNYFSEMQKKYHIEPKLEHYSCMVDMLGRAGHLDH 843
            G  PD  TF+G+L AC+H+GL+ EGL Y  +M+  + ++P L+HY+C++DMLGRAG LD 
Sbjct: 443  GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 502

Query: 842  AESLV-EEMRETPDVGIWSALLSACRLHGNVTLGEKVSEKLLELEPYKAENYVLVSNMFA 666
            A  +V EEM E  DVGIW +LLS+CR+H N+ +GEKV+ KL ELEP K ENYVL+SN++A
Sbjct: 503  ALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 562

Query: 665  GAXXXXXXXXXXXRMKEIGLKKN------------MKDVVGLRLMVKF------------ 558
            G            RM E+ L+K+               VVG R +  F            
Sbjct: 563  GLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 622

Query: 557  ----------TTS*QVCCA-----------GTVLAITFGLLKTTKGRTVRVCKNLGVCGD 441
                      T S Q   +              LA+T+GL+KT++G T+RV KNL +C D
Sbjct: 623  KISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVD 682

Query: 440  CHNAAKLVSKVVDRDIVVRDNKRFHHFSDCFCSCGDYW 327
            CHNAAKL+SKV++R+IVVRDNKRFHHF +  CSCGDYW
Sbjct: 683  CHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720


>gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  218 bits (554), Expect = 2e-54
 Identities = 121/269 (44%), Positives = 162/269 (60%), Gaps = 46/269 (17%)
 Frame = -1

Query: 1022 GLKPDAFTFIGILMACSHAGLVGEGLNYFSEMQKKYHIEPKLEHYSCMVDMLGRAGHLDH 843
            G  PD  TF+G+L AC+H+GL+ EGL Y  +M+  + ++P L+HY+C++DMLGRAG LD 
Sbjct: 1048 GHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 1107

Query: 842  AESLV-EEMRETPDVGIWSALLSACRLHGNVTLGEKVSEKLLELEPYKAENYVLVSNMFA 666
            A  +V EEM E  DVGIW +LLS+CR+H N+ +GEKV+ KL ELEP K ENYVL+SN++A
Sbjct: 1108 ALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 1167

Query: 665  GAXXXXXXXXXXXRMKEIGLKKN------------MKDVVGLRLMVKF------------ 558
            G            RM E+ L+K+               VVG R +  F            
Sbjct: 1168 GLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEM 1227

Query: 557  ----------TTS*QVCCA-----------GTVLAITFGLLKTTKGRTVRVCKNLGVCGD 441
                      T S Q   +              LA+T+GL+KT++G T+RV KNL +C D
Sbjct: 1228 KISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVD 1287

Query: 440  CHNAAKLVSKVVDRDIVVRDNKRFHHFSD 354
            CHNAAKL+SKV++R+IVVRDNKRFHHF +
Sbjct: 1288 CHNAAKLISKVMEREIVVRDNKRFHHFKN 1316


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  139 bits (350), Expect(3) = 3e-54
 Identities = 64/122 (52%), Positives = 81/122 (66%)
 Frame = -1

Query: 1025 EGLKPDAFTFIGILMACSHAGLVGEGLNYFSEMQKKYHIEPKLEHYSCMVDMLGRAGHLD 846
            EG  PD  TF+G+L AC HAGL+  G  YFS M + Y + PKL HY CM+D+ GRAG  D
Sbjct: 459  EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518

Query: 845  HAESLVEEMRETPDVGIWSALLSACRLHGNVTLGEKVSEKLLELEPYKAENYVLVSNMFA 666
             AE+LV+ M   PD  IW +LL ACR+H  + L E V++ L ELEP     YVL+SN++A
Sbjct: 519  EAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYA 578

Query: 665  GA 660
            GA
Sbjct: 579  GA 580



 Score = 95.1 bits (235), Expect(3) = 3e-54
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = -1

Query: 521 LAITFGLLKTTKGRTVRVCKNLGVCGDCHNAAKLVSKVVDRDIVVRDNKRFHHFSDCFCS 342
           LAI FGL+ T  G T+R+ KNL VCG+CH+A KL+SK+ +R+I+ RD  RFHHF D  CS
Sbjct: 672 LAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCS 731

Query: 341 CGDYW 327
           C DYW
Sbjct: 732 CKDYW 736



 Score = 25.8 bits (55), Expect(3) = 3e-54
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 615 DRPEEEYEGCSWIEVDGKIYNFIAGMLRGHSARNHFWTVKD 493
           D   ++  GCS IEVD  ++ F+ G  + H   N  + + D
Sbjct: 595 DNRMKKVPGCSSIEVDSVVHEFLVGD-KVHPQSNEIYKMLD 634