BLASTX nr result

ID: Aconitum21_contig00018949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018949
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337379.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002337050.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_002333183.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]    99   4e-19
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    95   1e-17

>ref|XP_002337379.1| predicted protein [Populus trichocarpa] gi|222838944|gb|EEE77295.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
 Frame = +3

Query: 90  VRKRKQRSKVWDDFEQIQNKLGQNKAIGKYCNQEFAASSSNRTSNLRNQSMRCRVRKEES 269
           + K+++ S VW+ F++ + K G+  A  KYCN+ + A S+  TSNL     +C  +++  
Sbjct: 252 INKKRKVSSVWEGFKKHEGKYGEAWATCKYCNKRYRAESTRGTSNLHKHLQKCLSKRQGG 311

Query: 270 GQQYGA-LTNKDDRTPTF-RNSKFNQERSRRDVCKMIVKHDYPFSMVEHDYFREFVKNLQ 443
            +Q  + L   DD   +  RN  F+QERS  ++ +M++KH YP  MV+H++F  FVKNLQ
Sbjct: 312 AEQQSSPLVESDDLISSIQRNFVFDQERSHLNIARMMIKHGYPLDMVQHEFFETFVKNLQ 371

Query: 444 PAFQLKHRNTISSDIKKLYNEE 509
           P FQL  ++ + +D+  +Y +E
Sbjct: 372 PMFQLHSKDMVEADVLAIYRQE 393


>ref|XP_002337050.1| predicted protein [Populus trichocarpa] gi|222837919|gb|EEE76284.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
 Frame = +3

Query: 87  SVRKRKQRSKVWDDFEQIQNKLGQNKAIGKYCNQEFAASSSNRTSNLRNQSMRCRVRKEE 266
           S  KR++ S VWD F +   + G+  A   YC +E+ A S   TSNL      C   +++
Sbjct: 194 STNKRRKISAVWDGFVKHTAENGEEWATCNYCKKEYRAESKRGTSNLHKHLKNCSPSRQD 253

Query: 267 SGQQYGALTNKDDRTPTF-RNSKFNQERSRRDVCKMIVKHDYPFSMVEHDYFREFVKNLQ 443
             +Q   + + D  T    RN   +QERSR D+  MI+KH YP  MV+H++F  FVKNLQ
Sbjct: 254 EAEQQILVGSGDLSTSVIQRNFVIDQERSRLDIATMIIKHGYPLDMVQHEFFEIFVKNLQ 313

Query: 444 PAFQLKHRNTISSDIKKLYNEE 509
           P F+L  R+ + +D+  +  +E
Sbjct: 314 PVFKLYSRDVVEADVLSICRQE 335


>ref|XP_002333183.1| predicted protein [Populus trichocarpa] gi|222835037|gb|EEE73486.1|
           predicted protein [Populus trichocarpa]
          Length = 886

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
 Frame = +3

Query: 87  SVRKRKQRSKVWDDFEQIQNKLGQNKAIGKYCNQEFAASSSNRTSNLRNQSMRC-RVRKE 263
           +  K+++ S VWD+F +   + G+  A  KYC +++ A S   TSNL     +C R R++
Sbjct: 279 TTNKQRKMSAVWDNFVKHTAENGEEWATCKYCKKKYRAESKRGTSNLHKHLKKCSRSRQD 338

Query: 264 ESGQQYGALTNKDDRTPTFRNSKFNQERSRRDVCKMIVKHDYPFSMVEHDYFREFVKNLQ 443
           E  QQ    T     +    N   +QERSR D+  MI+KH YP  MV+H++F  FVKNLQ
Sbjct: 339 EEEQQILVETGDLSTSVIQGNFVIDQERSRLDIATMIIKHGYPLDMVQHEFFDIFVKNLQ 398

Query: 444 PAFQLKHRNTISSDIKKLYNEE 509
           P F+L  ++ ++ D+  +   E
Sbjct: 399 PVFKLYSKDEVTDDVLTICRRE 420


>emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
          Length = 1368

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
 Frame = +3

Query: 93  RKRKQRSKVWDDFEQIQNKLGQNKAIGKYCNQEFAASSSNRTSNLRNQSMRCRVRKE-ES 269
           ++RK  S VW+DF++I    GQ+ AI K+C     A S N T +L     RC  R+  + 
Sbjct: 33  KRRKLTSVVWNDFDKIIED-GQDYAICKHCKGXLKADSKNGTKHLHVHIDRCMKRRNVDI 91

Query: 270 GQQYGALTNKDDRTPTFRNSKFNQERSRRDVCKMIVKHDYPFSMVEHDYFREFVKNLQPA 449
            QQ  A+  K         S F+QE SR  + + I+ H+YP S+V+H  FREF  +LQP 
Sbjct: 92  RQQLLAVERKGHGKVQIGGSTFDQEISREKIARAIILHEYPLSIVDHVRFREFATSLQPL 151

Query: 450 FQLKHRNTISSDIKKLYNEE 509
           F++  RNTI SDI K+Y  E
Sbjct: 152 FKMVSRNTIKSDIMKIYEVE 171


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
 Frame = +3

Query: 45  STSSKDTREEPSQTSVRKRKQRSKVWDDFEQIQNKLGQNKAIGKYCNQEFAASSSNRTSN 224
           STS+ D        + +KRK  S VW++FE++    GQ+ AI K+C  +  A S N T +
Sbjct: 100 STSTTD-----GSLTCKKRKLTSIVWNEFEKVIID-GQDYAICKHCKSKLKADSKNGTKH 153

Query: 225 LRNQSMRCRVRKE-ESGQQYGALTNKDDRTPTFRNSKFNQERSRRDVCKMIVKHDYPFSM 401
           L     RC  R+  +  QQ+ A+  K           F+Q+ SR  + + I+ H+YP S+
Sbjct: 154 LHVHLDRCIKRRNVDIKQQFLAIERKGYGKVQIGGFTFDQDISREKLARAIILHEYPLSI 213

Query: 402 VEHDYFREFVKNLQPAFQLKHRNTISSDIKKLYNEEGRVLNEQRASLAPSMVQALICTQD 581
           V+H  FR+F  +LQP F++  RNTI  DI K+Y  E   ++     L   M    I T  
Sbjct: 214 VDHAGFRDFASSLQPLFKMVSRNTIKDDIMKIYEFEKGKMSSYLEKLETRMA---ITTDM 270

Query: 582 WFPLSKDSF 608
           W    K  +
Sbjct: 271 WTSNQKKGY 279


Top