BLASTX nr result

ID: Aconitum21_contig00018271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018271
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47048.1| unknown [Lotus japonicus]                               64   1e-08
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr...    62   4e-08
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl...    62   5e-08
ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>gb|AFK47048.1| unknown [Lotus japonicus]
          Length = 107

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/57 (52%), Positives = 34/57 (59%)
 Frame = +1

Query: 193 EKSNNGRRDXXXXXXXXXXXXXXXXXXXDEPARGTPEAKKKYAPICVTMPTARICHK 363
           E SNNGRR+                   DEP  G+PEAKKKYAP+CVTMPTAR+C K
Sbjct: 47  EGSNNGRRNLMFVSAAAAVCSVAGIALADEPKNGSPEAKKKYAPVCVTMPTARVCRK 103


>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222845656|gb|EEE83203.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +1

Query: 184 KQVEKSNNGRRDXXXXXXXXXXXXXXXXXXXDE-PARGTPEAKKKYAPICVTMPTARICH 360
           K  E+S++GRRD                   DE P RGTPEAKKKYAPICVTMPTARIC 
Sbjct: 45  KNKEESSSGRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICR 104

Query: 361 K 363
           K
Sbjct: 105 K 105


>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223543089|gb|EEF44624.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 104

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = +1

Query: 193 EKSNNGRRDXXXXXXXXXXXXXXXXXXXDEPARGTPEAKKKYAPICVTMPTARICHK 363
           ++S+NGRRD                   +EP  GTPEAKK Y+P+CVTMPTARICHK
Sbjct: 48  KESSNGRRDLMFAAVAAAACSVAGVAAAEEPKAGTPEAKKFYSPVCVTMPTARICHK 104


>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 106

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = +1

Query: 196 KSNNGRRDXXXXXXXXXXXXXXXXXXXDEPARGTPEAKKKYAPICVTMPTARICHK 363
           +S  GRR+                   DEPARG+PEAK+KYAPICVTMPTARIC K
Sbjct: 51  ESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106


>ref|XP_002314076.1| predicted protein [Populus trichocarpa] gi|222850484|gb|EEE88031.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/59 (55%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +1

Query: 184 KQVEKSNNGRRDXXXXXXXXXXXXXXXXXXXDE-PARGTPEAKKKYAPICVTMPTARIC 357
           K  E+S+ GRRD                   DE P RGTPEAKKKYAPICVTMPTARIC
Sbjct: 45  KNREESSGGRRDLMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARIC 103


Top