BLASTX nr result

ID: Aconitum21_contig00018179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018179
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   170   1e-40
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   167   8e-40
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...   159   2e-37
dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         154   9e-36
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   149   3e-34

>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/134 (59%), Positives = 103/134 (76%), Gaps = 4/134 (2%)
 Frame = -2

Query: 391 VIGVPGRSSFENFVKV----VGGEDPTGFSIDVFNRALGLLNYDLPHKFEAFNSSYDDLV 224
           +IGVPGR+SFE FVKV     G ++  GF I++F++   +L YDLP++FE FN +YDDLV
Sbjct: 309 IIGVPGRTSFEKFVKVSTNSAGKKEYDGFCIELFHKVREVLKYDLPYQFEPFNGTYDDLV 368

Query: 223 NQVYLKNVDAVVGDITILANRSNYVEFTQPYAESGLTMVVPVKPEERDWMFVRPFTSNMW 44
           + VY K  DA+VGD+TILANRS+ VEFTQPYAESGL+M+V  K EE  WMF++PFT  MW
Sbjct: 369 DHVYNKTFDAIVGDVTILANRSDKVEFTQPYAESGLSMIVSAKSEESAWMFMKPFTKEMW 428

Query: 43  LVLGMVFVYTMFVV 2
           LV G + +YTMF+V
Sbjct: 429 LVTGAILIYTMFIV 442


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 4/134 (2%)
 Frame = -2

Query: 391 VIGVPGRSSFENFVKV----VGGEDPTGFSIDVFNRALGLLNYDLPHKFEAFNSSYDDLV 224
           +IGVPGR+SFE FVKV     G ++  GF I++F + LG+L YDLP++F  +N +YDDLV
Sbjct: 454 IIGVPGRTSFEKFVKVSTNAAGKKEYDGFCIELFYKVLGVLAYDLPYQFIPYNGTYDDLV 513

Query: 223 NQVYLKNVDAVVGDITILANRSNYVEFTQPYAESGLTMVVPVKPEERDWMFVRPFTSNMW 44
           + VY K  DA+VGD+TILA+R+  VEFTQPYAESGL+M+VP K +E  WMF++PFT  MW
Sbjct: 514 DHVYNKTYDAIVGDVTILASRAEKVEFTQPYAESGLSMIVPAKYKESAWMFMKPFTKEMW 573

Query: 43  LVLGMVFVYTMFVV 2
           LV G V +YTMF+V
Sbjct: 574 LVTGAVLIYTMFIV 587


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 843

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/132 (58%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
 Frame = -2

Query: 391 VIGVPGRSSFENFVKVVGGEDPT--GFSIDVFNRALGLLNYDLPHKFEAFNSSYDDLVNQ 218
           +IGVPGR+SFE FVKVV   +    G+ I++F +   +L Y L H+F  +N  YDDLVN 
Sbjct: 397 IIGVPGRTSFEKFVKVVNASENRYDGYCIELFRKVTEVLGYSLYHRFVPYNGIYDDLVNH 456

Query: 217 VYLKNVDAVVGDITILANRSNYVEFTQPYAESGLTMVVPVKPEERDWMFVRPFTSNMWLV 38
           +Y K  DA+VGDITILA RS+ VEFTQPYAESGL+MVV VK EE  WMF++PFT  MW V
Sbjct: 457 LYNKTYDAIVGDITILAERSDKVEFTQPYAESGLSMVVTVKSEESAWMFMKPFTWEMWAV 516

Query: 37  LGMVFVYTMFVV 2
            G + +YTMF+V
Sbjct: 517 TGAILIYTMFIV 528


>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  154 bits (388), Expect = 9e-36
 Identities = 81/139 (58%), Positives = 98/139 (70%), Gaps = 9/139 (6%)
 Frame = -2

Query: 391 VIGVPGRSSFENFVKVVGGEDP-----TGFSIDVFNRALGLL--NYDLPHKFEAFNSSYD 233
           +IGVPGR+SFE FVKV    +      TGF ID+F   L +L  NY LP+ FEA++ SY 
Sbjct: 447 IIGVPGRTSFEKFVKVETVAETNEMKYTGFCIDLFKEVLKILEKNYTLPYDFEAYDGSYP 506

Query: 232 DLVNQVYLKNVDAVVGDITILANRSNYVEFTQPYAESGLTMVVPVK--PEERDWMFVRPF 59
           DLV QV     DA+VGDITILA R+ Y+EFTQP+AESGLTMVVPVK    ++ WMF++PF
Sbjct: 507 DLVQQVINGRYDAIVGDITILAERTKYIEFTQPFAESGLTMVVPVKFDKSKKAWMFLKPF 566

Query: 58  TSNMWLVLGMVFVYTMFVV 2
           T NMW+  G V VYTM VV
Sbjct: 567 TGNMWVATGSVLVYTMLVV 585


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/138 (52%), Positives = 100/138 (72%), Gaps = 9/138 (6%)
 Frame = -2

Query: 388 IGVPGRSSFENFVKVVGGE-DP----TGFSIDVFNRALGLL--NYDLPHKFEAFNSSYDD 230
           IG+P  +SF+ FVKV   + DP    TGF ID+F   + +L  NY LP+ F  ++ +YD+
Sbjct: 461 IGIPANTSFDKFVKVDEAQIDPEKKYTGFCIDIFREVIKILEQNYSLPYDFHPYDGTYDE 520

Query: 229 LVNQVYLKNVDAVVGDITILANRSNYVEFTQPYAESGLTMVVPVKPEE--RDWMFVRPFT 56
           LV++VY K  DAVVGD+TILANRS  VEFTQP+AESGL+M+ PVK  E  + W+F++PFT
Sbjct: 521 LVDRVYTKTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKSREAYKAWLFMKPFT 580

Query: 55  SNMWLVLGMVFVYTMFVV 2
             MW+V G++ +YTMF+V
Sbjct: 581 MEMWVVTGVILIYTMFIV 598


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