BLASTX nr result

ID: Aconitum21_contig00018148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018148
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...    45   1e-08
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...    42   1e-07
ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vi...    58   7e-07
ref|XP_002509504.1| zinc finger protein, putative [Ricinus commu...    55   6e-06
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]                   41   8e-06

>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 45.1 bits (105), Expect(2) = 1e-08
 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = +2

Query: 89  SEQDKCSRITRGAVKKRA---DQRQQPLTKKQVLLGEITNLTGSVV 217
           +EQ+ C+R+TR A K+ A       QPL KK+V+LGE+ NL+ ++V
Sbjct: 2   AEQENCTRVTRAAKKRAAALASTEDQPLNKKRVVLGELPNLSNAIV 47



 Score = 38.9 bits (89), Expect(2) = 1e-08
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 286 DPQMCVGYASEIYDYLHSME 345
           DPQMC  YAS+IY+YLH ME
Sbjct: 85  DPQMCAPYASDIYEYLHKME 104


>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 41.6 bits (96), Expect(2) = 1e-07
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
 Frame = +2

Query: 89  SEQDKCSRITRGAVKKRA---DQRQQPLTKKQVLLGEITNLTGSVVGL 223
           SE++ C RITR A K+ A       +PL KK+V+LGE+ NL+ + V +
Sbjct: 5   SEKENCVRITRAAKKRAAALASAEDRPLNKKRVVLGELPNLSNTTVSV 52



 Score = 38.9 bits (89), Expect(2) = 1e-07
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 286 DPQMCVGYASEIYDYLHSME 345
           DPQMC  YAS+IY+YLH ME
Sbjct: 88  DPQMCAPYASDIYEYLHKME 107


>ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vinifera]
           gi|147815339|emb|CAN67772.1| hypothetical protein
           VITISV_010523 [Vitis vinifera]
           gi|296082337|emb|CBI21342.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = +2

Query: 344 RDMHCPIASCGAKLKSLEGFEDHYRARHTASC 439
           R + CPI  CGA+L SLEGFEDHY ARHTASC
Sbjct: 64  RGLFCPIVGCGARLTSLEGFEDHYNARHTASC 95


>ref|XP_002509504.1| zinc finger protein, putative [Ricinus communis]
           gi|223549403|gb|EEF50891.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 253

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +2

Query: 344 RDMHCPIASCGAKLKSLEGFEDHYRARHTASC 439
           R++ CPI  CGA L SLE FEDHY ARHTASC
Sbjct: 68  REVSCPIVGCGAHLTSLEDFEDHYNARHTASC 99


>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
          Length = 382

 Score = 41.2 bits (95), Expect(2) = 8e-06
 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +2

Query: 92  EQDKCSRITRGAVKKRAD---QRQQPLTKKQVLLGEITNLTGSVVGL 223
           +Q+ C+R+TR A K+ A      +QPLT+K+V+LGE+  L+ ++V L
Sbjct: 3   DQENCARLTRAAKKRAAFAVVSDEQPLTQKRVVLGELPTLSNAIVPL 49



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 277 TGCDPQMCVGYASEIYDYLHSME 345
           T  +PQMC  YA++IY+YL  ME
Sbjct: 87  TSDNPQMCGAYATDIYEYLRDME 109


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