BLASTX nr result
ID: Aconitum21_contig00018019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00018019
(404 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi... 132 3e-29
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 131 7e-29
emb|CBI30729.3| unnamed protein product [Vitis vinifera] 131 7e-29
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 128 6e-28
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 125 3e-27
>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 132 bits (332), Expect = 3e-29
Identities = 60/130 (46%), Positives = 87/130 (66%)
Frame = +1
Query: 13 VGNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFL 192
VG+L YA+++ N I PNT+ WN IIR +++S E++ + QML S NS+TFPFL
Sbjct: 35 VGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFL 94
Query: 193 LKACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDT 372
L+AC A+ + Q+H ++ K G +D+F++N L+H+YA CG+IH AR LF+ RD
Sbjct: 95 LRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDA 154
Query: 373 VSWNSMLSGY 402
VSWN M+ GY
Sbjct: 155 VSWNIMIDGY 164
Score = 61.2 bits (147), Expect = 8e-08
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +1
Query: 64 NTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLLKACAQRGALQQGRQIH 243
N +W ++I G + S +L L +M + + LL ACA GAL QGR +H
Sbjct: 184 NVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLH 243
Query: 244 CVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFE--TSCNRDTVSWNSMLSGY 402
+ GVD D L++MY CGD+ A +F +D W +M+ G+
Sbjct: 244 FYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 131 bits (329), Expect = 7e-29
Identities = 60/125 (48%), Positives = 84/125 (67%)
Frame = +1
Query: 28 YARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLLKACA 207
YA + ++I PN+Y WNTIIR +A+SP E +L +F+QML + +P+ +TF F LK+C
Sbjct: 60 YAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCG 119
Query: 208 QRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTVSWNS 387
+++GRQIH + K G+ DLF N LIH+YA+CG I ARHL + RD VSWN+
Sbjct: 120 SFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNA 179
Query: 388 MLSGY 402
+LS Y
Sbjct: 180 LLSAY 184
Score = 88.6 bits (218), Expect = 5e-16
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Frame = +1
Query: 13 VGNLHYARKLVNQILEPNTYTWNTIIRGFA-SSPFSEVSLHLFNQMLQSQAIPNSFTFPF 189
VG L AR++ + N +WN +I G++ + FSEV L LF M + P++ T
Sbjct: 218 VGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEV-LVLFEDMQHAGVKPDNCTLVS 276
Query: 190 LLKACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRD 369
+L ACA GAL QG +H I K G+ D F L+ MY+ CG I A +F + +D
Sbjct: 277 VLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKD 336
Query: 370 TVSWNSMLSG 399
+WNS++SG
Sbjct: 337 ISTWNSIISG 346
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 SPVGNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFP 186
S G++ A ++ N L + TWN+II G ++ + +L +F++ML PN TF
Sbjct: 317 SKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFV 376
Query: 187 FLLKACAQRGALQQGRQI-HCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCN 363
+L AC++ G L +GR++ + ++ G+ + ++ + G + A L +
Sbjct: 377 CVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQ 436
Query: 364 RD-TVSWNSML 393
++ +V W S+L
Sbjct: 437 KEASVVWESLL 447
>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 131 bits (329), Expect = 7e-29
Identities = 60/125 (48%), Positives = 84/125 (67%)
Frame = +1
Query: 28 YARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLLKACA 207
YA + ++I PN+Y WNTIIR +A+SP E +L +F+QML + +P+ +TF F LK+C
Sbjct: 60 YAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCG 119
Query: 208 QRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTVSWNS 387
+++GRQIH + K G+ DLF N LIH+YA+CG I ARHL + RD VSWN+
Sbjct: 120 SFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNA 179
Query: 388 MLSGY 402
+LS Y
Sbjct: 180 LLSAY 184
Score = 84.0 bits (206), Expect = 1e-14
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 31 ARKLVNQILEPNTYTWNTIIRGFA-SSPFSEVSLHLFNQMLQSQAIPNSFTFPFLLKACA 207
+R++ + N +WN +I G++ + FSEV L LF M + P++ T +L ACA
Sbjct: 194 SRRVFGETPVKNVVSWNAMITGYSHAGRFSEV-LVLFEDMQHAGVKPDNCTLVSVLSACA 252
Query: 208 QRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTVSWNS 387
GAL QG +H I K G+ D F L+ MY+ CG I A +F + +D +WNS
Sbjct: 253 HVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNS 312
Query: 388 MLSG 399
++SG
Sbjct: 313 IISG 316
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 SPVGNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFP 186
S G++ A ++ N L + TWN+II G ++ + +L +F++ML PN TF
Sbjct: 287 SKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFV 346
Query: 187 FLLKACAQRGALQQGRQI-HCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCN 363
+L AC++ G L +GR++ + ++ G+ + ++ + G + A L +
Sbjct: 347 CVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQ 406
Query: 364 RD-TVSWNSML 393
++ +V W S+L
Sbjct: 407 KEASVVWESLL 417
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 128 bits (321), Expect = 6e-28
Identities = 60/129 (46%), Positives = 89/129 (68%)
Frame = +1
Query: 16 GNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLL 195
G+L YAR + ++I PNT+ WNT+IRG+++S E +L L++ ML N++TFPFLL
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 196 KACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTV 375
KAC+ AL++ +QIH I K G +++++ N L+++Y+ GDI AR LF+ RDTV
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 376 SWNSMLSGY 402
SWNSM+ GY
Sbjct: 186 SWNSMIDGY 194
Score = 72.0 bits (175), Expect = 5e-11
Identities = 40/129 (31%), Positives = 65/129 (50%)
Frame = +1
Query: 16 GNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLL 195
G + A ++ N + E N +W ++I G + + +L+LF++M + ++ L
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 196 KACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTV 375
+ACA G L QG+ IH I K ++ D LI MYA CGD+ A +F +
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 376 SWNSMLSGY 402
W +M+SGY
Sbjct: 318 VWTAMISGY 326
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 125 bits (315), Expect = 3e-27
Identities = 59/129 (45%), Positives = 88/129 (68%)
Frame = +1
Query: 16 GNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLL 195
G+L YAR + ++I PNT+ WNT+IRG+++S E +L L++ ML N++TFPFLL
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 196 KACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTV 375
KAC+ A ++ +QIH I K G +++++ N L+++Y+ GDI AR LF+ RDTV
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185
Query: 376 SWNSMLSGY 402
SWNSM+ GY
Sbjct: 186 SWNSMIDGY 194
Score = 72.0 bits (175), Expect = 5e-11
Identities = 40/129 (31%), Positives = 65/129 (50%)
Frame = +1
Query: 16 GNLHYARKLVNQILEPNTYTWNTIIRGFASSPFSEVSLHLFNQMLQSQAIPNSFTFPFLL 195
G + A ++ N + E N +W ++I G + + +L+LF++M + ++ L
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 196 KACAQRGALQQGRQIHCVISKFGVDTDLFSINGLIHMYATCGDIHLARHLFETSCNRDTV 375
+ACA G L QG+ IH I K ++ D LI MYA CGD+ A +F +
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 376 SWNSMLSGY 402
W +M+SGY
Sbjct: 318 VWTAMISGY 326