BLASTX nr result
ID: Aconitum21_contig00017813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00017813
(368 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEZ00895.1| putative zinc finger CCCH-type family protein, pa... 164 3e-54
ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidops... 160 4e-54
gb|AAK96710.1| Unknown protein [Arabidopsis thaliana] gi|2138709... 160 4e-54
ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arab... 158 1e-53
ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [S... 166 2e-53
>gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 164 bits (414), Expect(3) = 3e-54
Identities = 75/83 (90%), Positives = 82/83 (98%)
Frame = +2
Query: 119 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAIDSNDSIPRSDVNREYFAEEHDR 298
KKTE+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAI+SND+IP+SDVNREYFAEEHDR
Sbjct: 65 KKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPKSDVNREYFAEEHDR 124
Query: 299 RARAGLDYESSFGKAQPNDTILK 367
RARAG+DYESS+GK +PNDTILK
Sbjct: 125 RARAGIDYESSYGKVRPNDTILK 147
Score = 60.1 bits (144), Expect(3) = 3e-54
Identities = 24/29 (82%), Positives = 29/29 (100%)
Frame = +3
Query: 3 LGDNPYLRMTKANFDKECKICTRPFTVFQ 89
LGDNPY+RMT+A++DKECKICTRPFTVF+
Sbjct: 27 LGDNPYVRMTRADYDKECKICTRPFTVFR 55
Score = 34.3 bits (77), Expect(3) = 3e-54
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 85 FRWRPGRDARYKK 123
FRWRPGRDARYKK
Sbjct: 54 FRWRPGRDARYKK 66
>ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 4; Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30
[Arabidopsis thaliana] gi|332189993|gb|AEE28114.1|
pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis
thaliana]
Length = 481
Score = 160 bits (404), Expect(3) = 4e-54
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = +2
Query: 119 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAIDSNDSIPRSDVNREYFAEEHDR 298
KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I ++DSIP+SDVNREYFAEEHDR
Sbjct: 65 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAEEHDR 124
Query: 299 RARAGLDYESSFGKAQPNDTILK 367
+ARAGLDYESSFGK +PNDTILK
Sbjct: 125 KARAGLDYESSFGKMRPNDTILK 147
Score = 63.2 bits (152), Expect(3) = 4e-54
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 3 LGDNPYLRMTKANFDKECKICTRPFTVFQ 89
LGDNPY+RMTKAN+DKECKICTRPFTVF+
Sbjct: 27 LGDNPYVRMTKANYDKECKICTRPFTVFR 55
Score = 34.3 bits (77), Expect(3) = 4e-54
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 85 FRWRPGRDARYKK 123
FRWRPGRDARYKK
Sbjct: 54 FRWRPGRDARYKK 66
>gb|AAK96710.1| Unknown protein [Arabidopsis thaliana] gi|21387095|gb|AAM47951.1|
unknown protein [Arabidopsis thaliana]
Length = 481
Score = 160 bits (404), Expect(3) = 4e-54
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = +2
Query: 119 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAIDSNDSIPRSDVNREYFAEEHDR 298
KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I ++DSIP+SDVNREYFAEEHDR
Sbjct: 65 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAEEHDR 124
Query: 299 RARAGLDYESSFGKAQPNDTILK 367
+ARAGLDYESSFGK +PNDTILK
Sbjct: 125 KARAGLDYESSFGKMRPNDTILK 147
Score = 63.2 bits (152), Expect(3) = 4e-54
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 3 LGDNPYLRMTKANFDKECKICTRPFTVFQ 89
LGDNPY+RMTKAN+DKECKICTRPFTVF+
Sbjct: 27 LGDNPYVRMTKANYDKECKICTRPFTVFR 55
Score = 34.3 bits (77), Expect(3) = 4e-54
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 85 FRWRPGRDARYKK 123
FRWRPGRDARYKK
Sbjct: 54 FRWRPGRDARYKK 66
>ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata] gi|297338238|gb|EFH68655.1| hypothetical protein
ARALYDRAFT_470757 [Arabidopsis lyrata subsp. lyrata]
Length = 481
Score = 158 bits (400), Expect(3) = 1e-53
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = +2
Query: 119 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAIDSNDSIPRSDVNREYFAEEHDR 298
KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL I ++DSIP+SDVNREYFAEEHDR
Sbjct: 65 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAEEHDR 124
Query: 299 RARAGLDYESSFGKAQPNDTILK 367
+ RAGLDYESSFGK +PNDTILK
Sbjct: 125 KTRAGLDYESSFGKMRPNDTILK 147
Score = 63.2 bits (152), Expect(3) = 1e-53
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = +3
Query: 3 LGDNPYLRMTKANFDKECKICTRPFTVFQ 89
LGDNPY+RMTKAN+DKECKICTRPFTVF+
Sbjct: 27 LGDNPYVRMTKANYDKECKICTRPFTVFR 55
Score = 34.3 bits (77), Expect(3) = 1e-53
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 85 FRWRPGRDARYKK 123
FRWRPGRDARYKK
Sbjct: 54 FRWRPGRDARYKK 66
>ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
gi|241934233|gb|EES07378.1| hypothetical protein
SORBIDRAFT_04g030200 [Sorghum bicolor]
Length = 491
Score = 166 bits (419), Expect(3) = 2e-53
Identities = 77/83 (92%), Positives = 83/83 (100%)
Frame = +2
Query: 119 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAIDSNDSIPRSDVNREYFAEEHDR 298
KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAI+SND+IPRSDVNREYFAEEHDR
Sbjct: 65 KKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEEHDR 124
Query: 299 RARAGLDYESSFGKAQPNDTILK 367
RARAG+DY+SS+GKA+PNDTILK
Sbjct: 125 RARAGIDYDSSYGKARPNDTILK 147
Score = 55.5 bits (132), Expect(3) = 2e-53
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 3 LGDNPYLRMTKANFDKECKICTRPFTVFQ 89
LGDNPY+RM +A +DKECKIC RPFTVF+
Sbjct: 27 LGDNPYVRMLRAEYDKECKICARPFTVFR 55
Score = 34.3 bits (77), Expect(3) = 2e-53
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 85 FRWRPGRDARYKK 123
FRWRPGRDARYKK
Sbjct: 54 FRWRPGRDARYKK 66