BLASTX nr result

ID: Aconitum21_contig00017787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00017787
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    42   2e-06
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]    42   2e-06
emb|CBI17547.3| unnamed protein product [Vitis vinifera]               42   2e-06

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score = 42.4 bits (98), Expect(3) = 2e-06
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 983  QATRHTRRGYVGGLSPTANEQVI 1051
            QATRH RR YVGGLSPTANEQ +
Sbjct: 228  QATRHARRVYVGGLSPTANEQSV 250



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +1

Query: 835 LCT*QFGTLPVMPVPAMTQQVRWIKHIMRI 924
           L + QFG LPVMPV AMTQQ    +H  R+
Sbjct: 209 LASGQFGALPVMPVQAMTQQA--TRHARRV 236



 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 696 GSDPTIYGNITDMFPTIFSVTNGQ 767
           G+ PTI G    MFP +F + +GQ
Sbjct: 194 GTTPTIPG----MFPNMFPLASGQ 213


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score = 42.4 bits (98), Expect(3) = 2e-06
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 983  QATRHTRRGYVGGLSPTANEQVI 1051
            QATRH RR YVGGLSPTANEQ +
Sbjct: 225  QATRHARRVYVGGLSPTANEQSV 247



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +1

Query: 835 LCT*QFGTLPVMPVPAMTQQVRWIKHIMRI 924
           L + QFG LPVMPV AMTQQ    +H  R+
Sbjct: 206 LASGQFGALPVMPVQAMTQQA--TRHARRV 233



 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 696 GSDPTIYGNITDMFPTIFSVTNGQ 767
           G+ PTI G    MFP +F + +GQ
Sbjct: 191 GTTPTIPG----MFPNMFPLASGQ 210


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 42.4 bits (98), Expect(3) = 2e-06
 Identities = 19/23 (82%), Positives = 20/23 (86%)
 Frame = +2

Query: 983  QATRHTRRGYVGGLSPTANEQVI 1051
            QATRH RR YVGGLSPTANEQ +
Sbjct: 53   QATRHARRVYVGGLSPTANEQSV 75



 Score = 33.1 bits (74), Expect(3) = 2e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +1

Query: 835 LCT*QFGTLPVMPVPAMTQQVRWIKHIMRI 924
           L + QFG LPVMPV AMTQQ    +H  R+
Sbjct: 34  LASGQFGALPVMPVQAMTQQA--TRHARRV 61



 Score = 22.7 bits (47), Expect(3) = 2e-06
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 696 GSDPTIYGNITDMFPTIFSVTNGQ 767
           G+ PTI G    MFP +F + +GQ
Sbjct: 19  GTTPTIPG----MFPNMFPLASGQ 38


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